RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 GAGE12BA1L429 117 aa5.16□□□□□ -1.58
SRP54-207ENST00000555535 ZBTB7CA1YPR0 619 aa5.16□□□□□ -1.58
SRP54-207ENST00000555535 GAGE12HA6NDE8 117 aa5.16□□□□□ -1.58
SRP54-207ENST00000555535 TMEM200CA6NKL6 621 aa5.16□□□□□ -1.58
SRP54-207ENST00000555535 ZFPL1O95159 310 aa5.16□□□□□ -1.58
SRP54-207ENST00000555535 PYGMP11217 842 aa5.16□□□□□ -1.58
SRP54-207ENST00000555535 CXCR5P32302 372 aa5.16□□□□□ -1.58
SRP54-207ENST00000555535 LACTBP83111 547 aaPredicted RBP5.16□□□□□ -1.58
SRP54-207ENST00000555535 SPIDRQ14159 915 aa5.16□□□□□ -1.58
SRP54-207ENST00000555535 ACAP1Q15027 740 aa5.16□□□□□ -1.58
SRP54-207ENST00000555535 PLA2G15Q8NCC3 412 aa5.16□□□□□ -1.58
SRP54-207ENST00000555535 SIMC1Q8NDZ2 872 aa5.16□□□□□ -1.58
SRP54-207ENST00000555535 PCDH19Q8TAB3 1148 aa5.16□□□□□ -1.58
SRP54-207ENST00000555535 LINC00476Q8WZB0 136 aa5.16□□□□□ -1.58
SRP54-207ENST00000555535 MRRFQ96E11 262 aaKnown RBP5.16□□□□□ -1.58
SRP54-207ENST00000555535 LRFN3Q9BTN0 628 aa5.16□□□□□ -1.58
SRP54-207ENST00000555535 WDR11Q9BZH6 1224 aa5.16□□□□□ -1.58
SRP54-207ENST00000555535 KCNH6Q9H252 994 aa5.16□□□□□ -1.58
SRP54-207ENST00000555535 ARHGEF4Q9NR80 690 aa5.16□□□□□ -1.58
SRP54-207ENST00000555535 CBLCQ9ULV8 474 aa5.16□□□□□ -1.58
SRP54-207ENST00000555535 MRVI1Q9Y6F6 885 aa5.16□□□□□ -1.58
SRP54-207ENST00000555535 COL11A2P13942 1736 aaPredicted RBP5.16□□□□□ -1.58
SRP54-207ENST00000555535 ASXL2Q76L83 1435 aa5.15□□□□□ -1.58
SRP54-207ENST00000555535 UNCXA6NJT0 531 aa5.15□□□□□ -1.59
SRP54-207ENST00000555535 GOLGA6L22H0YM25 854 aa5.15□□□□□ -1.59
SRP54-207ENST00000555535 SDHAP31040 664 aa5.15□□□□□ -1.59
SRP54-207ENST00000555535 NHLH1Q02575 133 aa5.15□□□□□ -1.59
SRP54-207ENST00000555535 FOXF2Q12947 444 aa5.15□□□□□ -1.59
SRP54-207ENST00000555535 DGKDQ16760 1214 aa5.15□□□□□ -1.59
SRP54-207ENST00000555535 VPS37DQ86XT2 251 aa5.15□□□□□ -1.59
SRP54-207ENST00000555535 SRRM1Q8IYB3 904 aaKnown RBP5.15□□□□□ -1.59
SRP54-207ENST00000555535 FAM98AQ8NCA5 519 aaKnown RBP5.15□□□□□ -1.59
SRP54-207ENST00000555535 E2F7Q96AV8 911 aa5.15□□□□□ -1.59
SRP54-207ENST00000555535 FOXB1Q99853 325 aa5.15□□□□□ -1.59
SRP54-207ENST00000555535 PDCD2LQ9BRP1 358 aa5.15□□□□□ -1.59
SRP54-207ENST00000555535 RNF7Q9UBF6 113 aa5.15□□□□□ -1.59
SRP54-207ENST00000555535 EIF2B4Q9UI10 523 aaKnown RBP5.15□□□□□ -1.59
SRP54-207ENST00000555535 EPN1Q9Y6I3 576 aaPredicted RBP5.15□□□□□ -1.59
SRP54-207ENST00000555535 BLACEA4D250 179 aa5.14□□□□□ -1.59
SRP54-207ENST00000555535 ARVCFO00192 962 aa5.14□□□□□ -1.59
SRP54-207ENST00000555535 RNASET2O00584 256 aaKnown RBP5.14□□□□□ -1.59
SRP54-207ENST00000555535 DAPK3O43293 454 aa5.14□□□□□ -1.59
SRP54-207ENST00000555535 TOX4O94842 621 aa5.14□□□□□ -1.59
SRP54-207ENST00000555535 SEC24CP53992 1094 aa5.14□□□□□ -1.59
SRP54-207ENST00000555535 CLEC14AQ86T13 490 aa5.14□□□□□ -1.59
SRP54-207ENST00000555535 CXorf67Q86X51 503 aaPredicted RBP5.14□□□□□ -1.59
SRP54-207ENST00000555535 CMTM4Q8IZR5 234 aa5.14□□□□□ -1.59
SRP54-207ENST00000555535 LRRC47Q8N1G4 583 aaKnown RBP5.14□□□□□ -1.59
SRP54-207ENST00000555535 SLC7A14Q8TBB6 771 aa5.14□□□□□ -1.59
SRP54-207ENST00000555535 CAGE1Q8TC20 777 aa5.14□□□□□ -1.59
SRP54-207ENST00000555535 PTPRN2Q92932 1015 aa5.14□□□□□ -1.59
SRP54-207ENST00000555535 DCLRE1CQ96SD1 692 aaKnown RBP5.14□□□□□ -1.59
SRP54-207ENST00000555535 TGIF2Q9GZN2 237 aa5.14□□□□□ -1.59
SRP54-207ENST00000555535 C14orf93Q9H972 538 aaKnown RBP5.14□□□□□ -1.59
SRP54-207ENST00000555535 SMURF1Q9HCE7 757 aa5.14□□□□□ -1.59
SRP54-207ENST00000555535 ZFP36P26651 326 aaKnown RBP5.13□□□□□ -1.59
SRP54-207ENST00000555535 ALDH6A1Q02252 535 aaKnown RBP5.13□□□□□ -1.59
SRP54-207ENST00000555535 SEC23AQ15436 765 aa5.13□□□□□ -1.59
SRP54-207ENST00000555535 LRP10Q7Z4F1 713 aa5.13□□□□□ -1.59
SRP54-207ENST00000555535 CMTR2Q8IYT2 770 aaKnown RBP5.13□□□□□ -1.59
SRP54-207ENST00000555535 ZNF366Q8N895 744 aa5.13□□□□□ -1.59
SRP54-207ENST00000555535 Q8N9P0 234 aaPredicted RBP5.13□□□□□ -1.59
SRP54-207ENST00000555535 OR5AN1Q8NGI8 311 aa5.13□□□□□ -1.59
SRP54-207ENST00000555535 NKD2Q969F2 451 aaPredicted RBP5.13□□□□□ -1.59
SRP54-207ENST00000555535 SLC29A3Q9BZD2 475 aa5.13□□□□□ -1.59
SRP54-207ENST00000555535 TRAF6Q9Y4K3 522 aa5.13□□□□□ -1.59
SRP54-207ENST00000555535 CCDC66A2RUB6 948 aa5.12□□□□□ -1.59
SRP54-207ENST00000555535 MTSS1O43312 755 aa5.12□□□□□ -1.59
SRP54-207ENST00000555535 APPP05067 770 aa5.12□□□□□ -1.59
SRP54-207ENST00000555535 HK1P19367 917 aa5.12□□□□□ -1.59
SRP54-207ENST00000555535 BMPR1AP36894 532 aa5.12□□□□□ -1.59
SRP54-207ENST00000555535 GUCY1A3Q02108 690 aa5.12□□□□□ -1.59
SRP54-207ENST00000555535 DDB1Q16531 1140 aa5.12□□□□□ -1.59
SRP54-207ENST00000555535 GPR162Q16538 588 aa5.12□□□□□ -1.59
SRP54-207ENST00000555535 SP5Q6BEB4 398 aaPredicted RBP5.12□□□□□ -1.59
SRP54-207ENST00000555535 GLB1L3Q8NCI6 653 aaPredicted RBP5.12□□□□□ -1.59
SRP54-207ENST00000555535 WDR92Q96MX6 357 aa5.12□□□□□ -1.59
SRP54-207ENST00000555535 CAPN10Q9HC96 672 aa5.12□□□□□ -1.59
SRP54-207ENST00000555535 ANKFY1Q9P2R3 1169 aa5.12□□□□□ -1.59
SRP54-207ENST00000555535 R3HCC1Q9Y3T6 440 aaKnown RBP5.12□□□□□ -1.59
SRP54-207ENST00000555535 DNAJC9-AS1A6NH13 148 aa5.11□□□□□ -1.59
SRP54-207ENST00000555535 AHRRA9YTQ3 701 aa5.11□□□□□ -1.59
SRP54-207ENST00000555535 SCDO00767 359 aa5.11□□□□□ -1.59
SRP54-207ENST00000555535 LPXNO60711 386 aa5.11□□□□□ -1.59
SRP54-207ENST00000555535 NOSTRINQ8IVI9 506 aa5.11□□□□□ -1.59
SRP54-207ENST00000555535 C1QTNF7Q9BXJ2 289 aa5.11□□□□□ -1.59
SRP54-207ENST00000555535 NCDNQ9UBB6 729 aa5.11□□□□□ -1.59
SRP54-207ENST00000555535 TLK1Q9UKI8 766 aa5.11□□□□□ -1.59
SRP54-207ENST00000555535 PCDHA8Q9Y5H6 950 aa5.11□□□□□ -1.59
SRP54-207ENST00000555535 B3GALT1Q9Y5Z6 326 aa5.11□□□□□ -1.59
SRP54-207ENST00000555535 COL3A1P02461 1466 aaPredicted RBP5.1□□□□□ -1.59
SRP54-207ENST00000555535 ROM1Q03395 351 aa5.1□□□□□ -1.59
SRP54-207ENST00000555535 ABHD17BQ5VST6 288 aa5.1□□□□□ -1.59
SRP54-207ENST00000555535 C1QL2Q7Z5L3 287 aa5.1□□□□□ -1.59
SRP54-207ENST00000555535 ST13P5Q8NFI4 369 aaPredicted RBP5.1□□□□□ -1.59
SRP54-207ENST00000555535 ZNF768Q9H5H4 540 aaKnown RBP5.1□□□□□ -1.59
SRP54-207ENST00000555535 CCSER2Q9H7U1 834 aa5.1□□□□□ -1.59
SRP54-207ENST00000555535 AKIP1Q9NQ31 210 aa5.1□□□□□ -1.59
SRP54-207ENST00000555535 KMT5AQ9NQR1 393 aa5.1□□□□□ -1.59
SRP54-207ENST00000555535 KCMF1Q9P0J7 381 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms