RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 PAX7P23759 505 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 RPA1P27694 616 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 CIITAP33076 1130 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 SREBF1P36956 1147 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 POU5F1Q01860 360 aaKnown RBP11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 KLRC3Q07444 240 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 ADCY2Q08462 1091 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 PPP2R5AQ15172 486 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 ABCB5Q2M3G0 1257 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 DACT2Q5SW24 774 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 SYDE2Q5VT97 1194 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 STYK1Q6J9G0 422 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 POTEBQ6S5H4 581 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 TRPM8Q7Z2W7 1104 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 VPS36Q86VN1 386 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 ZFPM1Q8IX07 1006 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 SYT2Q8N9I0 419 aaPredicted RBP11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 ARMC2Q8NEN0 867 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 TPCN2Q8NHX9 752 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 ETNPPLQ8TBG4 499 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 ATXN2LQ8WWM7 1075 aaKnown RBP11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 AKT1S1Q96B36 256 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 L3MBTL3Q96JM7 780 aaPredicted RBP11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 SPAG5Q96R06 1193 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 FAM198AQ9UFP1 575 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 ADAMTS1Q9UHI8 967 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 PACSIN2Q9UNF0 486 aaPredicted RBP11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 DDTLA6NHG4 134 aaPredicted RBP11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 OPLAHO14841 1288 aa11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 DAPK3O43293 454 aa11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 CALUO43852 315 aaPredicted RBP11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 MED24O75448 989 aa11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 LUC7L3O95232 432 aaKnown RBP11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 MMEP08473 750 aa11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 CYP3A4P08684 503 aa11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 CCNG1P51959 295 aa11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 RBM5P52756 815 aaKnown RBP eCLIP11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 ADAM9Q13443 819 aa11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 DHX34Q14147 1143 aaKnown RBP11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 C6orf118Q5T5N4 469 aa11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 PEX26Q7Z412 305 aa11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 FRMD5Q7Z6J6 570 aa11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 APLFQ8IW19 511 aaPredicted RBP11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 GLIS3Q8NEA6 775 aa11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 NSMCE1Q8WV22 266 aa11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 SCFD1Q8WVM8 642 aa11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 CNKSR1Q969H4 720 aa11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 DDX47Q9H0S4 455 aaKnown RBP11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 PABPC3Q9H361 631 aaKnown RBP11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 TRAF3IP3Q9Y228 551 aa11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 ARFGEF1Q9Y6D6 1849 aa11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 ATRNL1Q5VV63 1379 aa11.57□□□□□ -0.56
MTHFD1-210ENST00000555252 SIPA1L1O43166 1804 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 PLSCR1O15162 318 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 RAD21O60216 631 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 BMP3P12645 472 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 CHN1P15882 459 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 EPS15P42566 896 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 PDE6CP51160 858 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 PTENP60484 403 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 SPIRE1Q08AE8 756 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 TCP10Q12799 353 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 RBM26Q5T8P6 1007 aaKnown RBP11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 SIAH1Q8IUQ4 282 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 KIAA0825Q8IV33 1275 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 NEK9Q8TD19 979 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 TCP11Q8WWU5 503 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 HES6Q96HZ4 224 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 IFT74Q96LB3 600 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 POLR3CQ9BUI4 534 aaPredicted RBP11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 DBNDD1Q9H9R9 158 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 PARP2Q9UGN5 583 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 NAGPAQ9UK23 515 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 TRPC6Q9Y210 931 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 ADAMTSL1Q8N6G6 1762 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 PIK3CDO00329 1044 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 O00370 1275 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 PDXKO00764 312 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 ECE2O60344 883 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 WFS1O76024 890 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 NQO1P15559 274 aaKnown RBP11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 HSPA6P17066 643 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 DNA2P51530 1060 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 MKRN4PQ13434 485 aaPredicted RBP11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 GIT2Q14161 759 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 PRR16Q569H4 304 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 ARSHQ5FYA8 562 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 TAOK1Q7L7X3 1001 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 SH3BP5LQ7L8J4 393 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 IRF2BP2Q7Z5L9 587 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 DDX42Q86XP3 938 aaKnown RBP eCLIP11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 CATSPER3Q86XQ3 398 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 FAM133AQ8N9E0 248 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 FAM212AQ96EL1 285 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 PACSIN1Q9BY11 444 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 METTL14Q9HCE5 456 aaKnown RBP11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 AMACRQ9UHK6 382 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 RASAL2Q9UJF2 1139 aa11.56□□□□□ -0.56
MTHFD1-210ENST00000555252 COL11A2P13942 1736 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms