RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 CDC42EP5Q6NZY7 148 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 VSIG10LQ86VR7 867 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 ERC1Q8IUD2 1116 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 KRTAP1-3Q8IUG1 177 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 SIRT2Q8IXJ6 389 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 SPATA5Q8NB90 893 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 FLCNQ8NFG4 579 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.04□□□□□ -1.6
CPSF2-204ENST00000555244 MRGPRX3Q96LB0 322 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 KRTAP4-12Q9BQ66 201 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 ZCCHC17Q9NP64 241 aaKnown RBP5.04□□□□□ -1.6
CPSF2-204ENST00000555244 SEMA3GQ9NS98 782 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 ADGRE2Q9UHX3 823 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 DUSP13Q9UII6 198 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 SCAF8Q9UPN6 1271 aaKnown RBP5.04□□□□□ -1.6
CPSF2-204ENST00000555244 U3KQE9 123 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 FPGT-TNNI3KV9GXZ4 949 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 COL2A1P02458 1487 aaPredicted RBP5.04□□□□□ -1.6
CPSF2-204ENST00000555244 H0Y8X5 98 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 ENPP3O14638 875 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 CDC45O75419 566 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 SURF6O75683 361 aaKnown RBP5.03□□□□□ -1.6
CPSF2-204ENST00000555244 WDHD1O75717 1129 aaPredicted RBP5.03□□□□□ -1.6
CPSF2-204ENST00000555244 CPP00450 1065 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 LDHCP07864 332 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 FAM153BP0C7A2 387 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 FGFR1P11362 822 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 HSD3B2P26439 372 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 MCAMP43121 646 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 RGS19P49795 217 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 RBM5P52756 815 aaKnown RBP eCLIP5.03□□□□□ -1.6
CPSF2-204ENST00000555244 GTF2IRD2BQ6EKJ0 949 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 RNF111Q6ZNA4 994 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 GTF2IRD2Q86UP8 949 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 CREG2Q8IUH2 290 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 ITPRIPQ8IWB1 547 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 SCUBE1Q8IWY4 988 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 SYNPOQ8N3V7 929 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 PANK1Q8TE04 598 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 NSUN4Q96CB9 384 aaKnown RBP5.03□□□□□ -1.6
CPSF2-204ENST00000555244 EAF2Q96CJ1 260 aaPredicted RBP5.03□□□□□ -1.6
CPSF2-204ENST00000555244 WNK4Q96J92 1243 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 CLMNQ96JQ2 1002 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 TMEM39BQ9GZU3 492 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 NKX2-4Q9H2Z4 354 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 VEZTQ9HBM0 779 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 CYP26B1Q9NR63 512 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 ARHGEF4Q9NR80 690 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 TMEM260Q9NX78 707 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 TMOD2Q9NZR1 351 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 DBNLQ9UJU6 430 aaKnown RBP5.03□□□□□ -1.6
CPSF2-204ENST00000555244 TCFL5Q9UL49 500 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 PTCH2Q9Y6C5 1203 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 AKAP11Q9UKA4 1901 aa5.03□□□□□ -1.6
CPSF2-204ENST00000555244 MROH7-TTC4A0A0A0MT08 1334 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 TCP10L2B9ZVM9 353 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 ADCY3O60266 1144 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 RAB11FIP3O75154 756 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 CD3EP07766 207 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 SYPP08247 313 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 SNRPB2P08579 225 aaKnown RBP5.02□□□□□ -1.61
CPSF2-204ENST00000555244 VAV1P15498 845 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 CTSKP43235 329 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 KCNJ6P48051 423 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 GSTO1P78417 241 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 MECOMQ03112 1051 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 PPATQ06203 517 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 VGLL4Q14135 290 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 PKN2Q16513 984 aaKnown RBP5.02□□□□□ -1.61
CPSF2-204ENST00000555244 DPY19L1Q2PZI1 675 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 GAB4Q2WGN9 574 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 CCDC158Q5M9N0 1113 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 LCE3BQ5TA77 95 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 CRTC3Q6UUV7 619 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 NSMFQ6X4W1 530 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 NFXL1Q6ZNB6 911 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 ERO1BQ86YB8 467 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 CERS3Q8IU89 383 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.02□□□□□ -1.61
CPSF2-204ENST00000555244 BTN2A2Q8WVV5 523 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 KCTD13Q8WZ19 329 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 KIF1BPQ96EK5 621 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 NEUROD6Q96NK8 337 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 PTPN18Q99952 460 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 DHRS4Q9BTZ2 278 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 ZNF341Q9BYN7 854 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 SLKQ9H2G2 1235 aaPredicted RBP5.02□□□□□ -1.61
CPSF2-204ENST00000555244 ATP13A1Q9HD20 1204 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 USP40Q9NVE5 1235 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 FANCLQ9NW38 375 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 SLC5A6Q9Y289 635 aa5.02□□□□□ -1.61
CPSF2-204ENST00000555244 GPR55Q9Y2T6 319 aaPredicted RBP5.02□□□□□ -1.61
CPSF2-204ENST00000555244 MYH13Q9UKX3 1938 aa5.01□□□□□ -1.61
CPSF2-204ENST00000555244 TRBV23-1A0A0A0MS06 115 aa5.01□□□□□ -1.61
CPSF2-204ENST00000555244 ESYT3A0FGR9 886 aa5.01□□□□□ -1.61
CPSF2-204ENST00000555244 CXCL11O14625 94 aa5.01□□□□□ -1.61
CPSF2-204ENST00000555244 AURKAO14965 403 aa5.01□□□□□ -1.61
CPSF2-204ENST00000555244 PRODHO43272 600 aa5.01□□□□□ -1.61
CPSF2-204ENST00000555244 CTNND1O60716 968 aaKnown RBP5.01□□□□□ -1.61
CPSF2-204ENST00000555244 HMMRO75330 724 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms