RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 CYP27B1O15528 508 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 SPDYE6P0CI01 402 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 EIF2AK2P19525 551 aaKnown RBP14.89□□□□□ -0.03
VTI1B-204ENST00000554659 MKRN3Q13064 507 aaKnown RBP14.89□□□□□ -0.03
VTI1B-204ENST00000554659 MTF1Q14872 753 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 DRAP1Q14919 205 aaPredicted RBP14.89□□□□□ -0.03
VTI1B-204ENST00000554659 TAF1BQ53T94 588 aaPredicted RBP14.89□□□□□ -0.03
VTI1B-204ENST00000554659 PADI6Q6TGC4 694 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 PARP9Q8IXQ6 854 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 DHX38Q92620 1227 aaKnown RBP14.89□□□□□ -0.03
VTI1B-204ENST00000554659 GRAMD1AQ96CP6 724 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 SLC12A6Q9UHW9 1150 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 MYBL1P10243 752 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 STOX1Q6ZVD7 989 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 SULF1Q8IWU6 871 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 HEMGNQ9BXL5 484 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 CLTCL1P53675 1640 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 POTEB3A0JP26 581 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 POTECB2RU33 542 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 ORC4O43929 436 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 SYF2O95926 243 aaKnown RBP14.89□□□□□ -0.03
VTI1B-204ENST00000554659 KRT10P13645 584 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 ZNF667Q5HYK9 610 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 POTEBQ6S5H4 581 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 RASGRP2Q7LDG7 609 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 DCPSQ96C86 337 aaKnown RBP14.89□□□□□ -0.03
VTI1B-204ENST00000554659 TGS1Q96RS0 853 aaKnown RBP14.89□□□□□ -0.03
VTI1B-204ENST00000554659 UTYO14607 1347 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 PRDX5P30044 214 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 ARL13BQ3SXY8 428 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 GRAMD4Q6IC98 578 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 FBXL5Q9UKA1 691 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 CPDO75976 1380 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 GLI2P10070 1586 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 NRKQ7Z2Y5 1582 aa14.89□□□□□ -0.03
VTI1B-204ENST00000554659 PPP1R12AO14974 1030 aaPredicted RBP14.88□□□□□ -0.03
VTI1B-204ENST00000554659 NMT2O60551 498 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 LPXNO60711 386 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 ZBTB41Q5SVQ8 909 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 SNF8Q96H20 258 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 ATP6V0A4Q9HBG4 840 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 TRPC5Q9UL62 973 aaPredicted RBP14.88□□□□□ -0.03
VTI1B-204ENST00000554659 CREB3O43889 395 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 CYP2C19P33261 490 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 VAMP7P51809 220 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 ZNF211Q13398 564 aaPredicted RBP14.88□□□□□ -0.03
VTI1B-204ENST00000554659 TTC1Q99614 292 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 ASNSD1Q9NWL6 643 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.88□□□□□ -0.03
VTI1B-204ENST00000554659 ATP8B3O60423 1300 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 FRMD5Q7Z6J6 570 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 NUDCD3Q8IVD9 361 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 FBXL13Q8NEE6 735 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.88□□□□□ -0.03
VTI1B-204ENST00000554659 TBC1D22BQ9NU19 505 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 BCS1LQ9Y276 419 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 ARAP3Q8WWN8 1544 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 ARHGEF37A1IGU5 675 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 WDR64B1ANS9 1081 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 OSTNP61366 133 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 STAG2Q8N3U4 1231 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 ZC3H15Q8WU90 426 aaKnown RBP14.88□□□□□ -0.03
VTI1B-204ENST00000554659 CYP26B1Q9NR63 512 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 MINPP1Q9UNW1 487 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 CHEK2O96017 543 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 TAC1P20366 129 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 OCRLQ01968 901 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 CCDC137Q6PK04 289 aaKnown RBP14.88□□□□□ -0.03
VTI1B-204ENST00000554659 VPS39Q96JC1 886 aa14.88□□□□□ -0.03
VTI1B-204ENST00000554659 PP2D1A8MPX8 630 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 KPNA7A9QM74 516 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 FTLP02792 175 aaPredicted RBP14.87□□□□□ -0.03
VTI1B-204ENST00000554659 ANXA13P27216 316 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 ISCA1Q9BUE6 129 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 NGRNQ9NPE2 291 aaKnown RBP14.87□□□□□ -0.03
VTI1B-204ENST00000554659 WARS2Q9UGM6 360 aaKnown RBP14.87□□□□□ -0.03
VTI1B-204ENST00000554659 TUBE1Q9UJT0 475 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 TYW5A2RUC4 315 aaKnown RBP14.87□□□□□ -0.03
VTI1B-204ENST00000554659 SLC4A1P02730 911 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 TBXAS1P24557 533 aaPredicted RBP14.87□□□□□ -0.03
VTI1B-204ENST00000554659 ECT2Q9H8V3 914 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 TMEM260Q9NX78 707 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 USP17L15C9J2P7 530 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 USP17L13C9JLJ4 530 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 USP17L11C9JVI0 530 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 USP17L18D6R9N7 530 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 USP17L22D6RA61 530 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 USP17L17D6RBQ6 530 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 USP17L19D6RCP7 530 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 USP17L20D6RJB6 530 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 PPP1R37O75864 691 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 SNAP25P60880 206 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 USP17L24Q0WX57 530 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 MTMR1Q13613 665 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 USP17L6PQ6QN14 398 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 TRIM67Q6ZTA4 783 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 SRLQ86TD4 932 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 TRIM59Q8IWR1 403 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 SUCLA2Q9P2R7 463 aaPredicted RBP14.87□□□□□ -0.03
VTI1B-204ENST00000554659 OSBPP22059 807 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms