RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 PRPHP41219 470 aa14.55□□□□□ -0.08
SHMT2-211ENST00000554310 RARRES1P49788 294 aa14.55□□□□□ -0.08
SHMT2-211ENST00000554310 LAMTOR4Q0VGL1 99 aa14.55□□□□□ -0.08
SHMT2-211ENST00000554310 PTGDRQ13258 359 aa14.55□□□□□ -0.08
SHMT2-211ENST00000554310 CATSPER3Q86XQ3 398 aa14.55□□□□□ -0.08
SHMT2-211ENST00000554310 C4orf32Q8N8J7 132 aa14.55□□□□□ -0.08
SHMT2-211ENST00000554310 PRPF31Q8WWY3 499 aaKnown RBP14.55□□□□□ -0.08
SHMT2-211ENST00000554310 PPM1EQ8WY54 764 aa14.55□□□□□ -0.08
SHMT2-211ENST00000554310 TMEM143Q96AN5 459 aa14.55□□□□□ -0.08
SHMT2-211ENST00000554310 C11orf84Q9BUA3 381 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-211ENST00000554310 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.55□□□□□ -0.08
SHMT2-211ENST00000554310 CHST12Q9NRB3 414 aa14.55□□□□□ -0.08
SHMT2-211ENST00000554310 BMP2KQ9NSY1 1161 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-211ENST00000554310 DBR1Q9UK59 544 aaKnown RBP14.55□□□□□ -0.08
SHMT2-211ENST00000554310 PCDHB6Q9Y5E3 794 aa14.55□□□□□ -0.08
SHMT2-211ENST00000554310 PRUNE2Q8WUY3 3088 aa14.55□□□□□ -0.08
SHMT2-211ENST00000554310 ASAP2O43150 1006 aa14.54□□□□□ -0.08
SHMT2-211ENST00000554310 MED24O75448 989 aa14.54□□□□□ -0.08
SHMT2-211ENST00000554310 PDCP20941 246 aa14.54□□□□□ -0.08
SHMT2-211ENST00000554310 BMPR1AP36894 532 aa14.54□□□□□ -0.08
SHMT2-211ENST00000554310 FAM189BP81408 668 aa14.54□□□□□ -0.08
SHMT2-211ENST00000554310 GPM6BQ13491 265 aa14.54□□□□□ -0.08
SHMT2-211ENST00000554310 MXD4Q14582 209 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-211ENST00000554310 CCDC85BQ15834 202 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-211ENST00000554310 PTPROQ16827 1216 aa14.54□□□□□ -0.08
SHMT2-211ENST00000554310 LARP1BQ659C4 914 aaKnown RBP14.54□□□□□ -0.08
SHMT2-211ENST00000554310 SRGAP1Q7Z6B7 1085 aa14.54□□□□□ -0.08
SHMT2-211ENST00000554310 FERMT3Q86UX7 667 aa14.54□□□□□ -0.08
SHMT2-211ENST00000554310 KSR1Q8IVT5 923 aa14.54□□□□□ -0.08
SHMT2-211ENST00000554310 PIGOQ8TEQ8 1089 aa14.54□□□□□ -0.08
SHMT2-211ENST00000554310 NACC1Q96RE7 527 aa14.54□□□□□ -0.08
SHMT2-211ENST00000554310 TRAIPQ9BWF2 469 aa14.54□□□□□ -0.08
SHMT2-211ENST00000554310 PLVAPQ9BX97 442 aa14.54□□□□□ -0.08
SHMT2-211ENST00000554310 IFT122Q9HBG6 1241 aa14.54□□□□□ -0.08
SHMT2-211ENST00000554310 XPNPEP1Q9NQW7 623 aa14.54□□□□□ -0.08
SHMT2-211ENST00000554310 CHMP5Q9NZZ3 219 aa14.54□□□□□ -0.08
SHMT2-211ENST00000554310 THEGQ9P2T0 379 aa14.54□□□□□ -0.08
SHMT2-211ENST00000554310 MRPL42Q9Y6G3 142 aaKnown RBP14.54□□□□□ -0.08
SHMT2-211ENST00000554310 ATG2AQ2TAZ0 1938 aa14.53□□□□□ -0.08
SHMT2-211ENST00000554310 IBSPP21815 317 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-211ENST00000554310 FGFR4P22455 802 aa14.53□□□□□ -0.08
SHMT2-211ENST00000554310 PHKA2P46019 1235 aa14.53□□□□□ -0.08
SHMT2-211ENST00000554310 TFDP1Q14186 410 aa14.53□□□□□ -0.08
SHMT2-211ENST00000554310 PDIA5Q14554 519 aa14.53□□□□□ -0.08
SHMT2-211ENST00000554310 PCBP1Q15365 356 aaKnown RBP eCLIP14.53□□□□□ -0.08
SHMT2-211ENST00000554310 PAN2Q504Q3 1202 aaKnown RBP14.53□□□□□ -0.08
SHMT2-211ENST00000554310 TIGD5Q53EQ6 642 aa14.53□□□□□ -0.08
SHMT2-211ENST00000554310 POTEGQ6S5H5 508 aa14.53□□□□□ -0.08
SHMT2-211ENST00000554310 CATSPER4Q7RTX7 472 aa14.53□□□□□ -0.08
SHMT2-211ENST00000554310 IGSF22Q8N9C0 903 aa14.53□□□□□ -0.08
SHMT2-211ENST00000554310 RNF149Q8NC42 400 aa14.53□□□□□ -0.08
SHMT2-211ENST00000554310 MCPH1Q8NEM0 835 aa14.53□□□□□ -0.08
SHMT2-211ENST00000554310 RSPH1Q8WYR4 309 aa14.53□□□□□ -0.08
SHMT2-211ENST00000554310 MRPL38Q96DV4 380 aaKnown RBP14.53□□□□□ -0.08
SHMT2-211ENST00000554310 LRWD1Q9UFC0 647 aa14.53□□□□□ -0.08
SHMT2-211ENST00000554310 PIN4Q9Y237 131 aaKnown RBP14.53□□□□□ -0.08
SHMT2-211ENST00000554310 NCOR1O75376 2440 aa14.53□□□□□ -0.08
SHMT2-211ENST00000554310 A0A0U1RQF3 1178 aa14.52□□□□□ -0.09
SHMT2-211ENST00000554310 USO1O60763 962 aaKnown RBP14.52□□□□□ -0.09
SHMT2-211ENST00000554310 CSDE1O75534 798 aaKnown RBP14.52□□□□□ -0.09
SHMT2-211ENST00000554310 SKIP12755 728 aa14.52□□□□□ -0.09
SHMT2-211ENST00000554310 DDIT3P35638 169 aa14.52□□□□□ -0.09
SHMT2-211ENST00000554310 CCT6AP40227 531 aaKnown RBP14.52□□□□□ -0.09
SHMT2-211ENST00000554310 GATMP50440 423 aa14.52□□□□□ -0.09
SHMT2-211ENST00000554310 RAB27AP51159 221 aa14.52□□□□□ -0.09
SHMT2-211ENST00000554310 ATP2C1P98194 919 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-211ENST00000554310 NAALADL2Q58DX5 795 aa14.52□□□□□ -0.09
SHMT2-211ENST00000554310 BRAPQ7Z569 592 aa14.52□□□□□ -0.09
SHMT2-211ENST00000554310 ECHDC2Q86YB7 292 aa14.52□□□□□ -0.09
SHMT2-211ENST00000554310 P2RX5Q93086 422 aa14.52□□□□□ -0.09
SHMT2-211ENST00000554310 INTS4Q96HW7 963 aaKnown RBP14.52□□□□□ -0.09
SHMT2-211ENST00000554310 TMEM117Q9H0C3 514 aa14.52□□□□□ -0.09
SHMT2-211ENST00000554310 LMAN2LQ9H0V9 348 aa14.52□□□□□ -0.09
SHMT2-211ENST00000554310 AGPAT5Q9NUQ2 364 aa14.52□□□□□ -0.09
SHMT2-211ENST00000554310 CIZ1Q9ULV3 898 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-211ENST00000554310 ARHGEF35A5YM69 484 aa14.51□□□□□ -0.09
SHMT2-211ENST00000554310 TBKBP1A7MCY6 615 aa14.51□□□□□ -0.09
SHMT2-211ENST00000554310 EOMESO95936 686 aa14.51□□□□□ -0.09
SHMT2-211ENST00000554310 SRGAP2CP0DJJ0 459 aa14.51□□□□□ -0.09
SHMT2-211ENST00000554310 FGFR1P11362 822 aa14.51□□□□□ -0.09
SHMT2-211ENST00000554310 ARL2P36404 184 aa14.51□□□□□ -0.09
SHMT2-211ENST00000554310 POU5F1BQ06416 359 aa14.51□□□□□ -0.09
SHMT2-211ENST00000554310 CAPSQ13938 189 aa14.51□□□□□ -0.09
SHMT2-211ENST00000554310 SKIV2LQ15477 1246 aaKnown RBP14.51□□□□□ -0.09
SHMT2-211ENST00000554310 FAM102BQ5T8I3 360 aa14.51□□□□□ -0.09
SHMT2-211ENST00000554310 ARL6IP4Q66PJ3 421 aaKnown RBP14.51□□□□□ -0.09
SHMT2-211ENST00000554310 TWF2Q6IBS0 349 aaKnown RBP14.51□□□□□ -0.09
SHMT2-211ENST00000554310 DTHD1Q6ZMT9 781 aa14.51□□□□□ -0.09
SHMT2-211ENST00000554310 ZNF598Q86UK7 904 aaKnown RBP14.51□□□□□ -0.09
SHMT2-211ENST00000554310 IFNLR1Q8IU57 520 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-211ENST00000554310 ABI1Q8IZP0 508 aa14.51□□□□□ -0.09
SHMT2-211ENST00000554310 LRRC43Q8N309 656 aa14.51□□□□□ -0.09
SHMT2-211ENST00000554310 SNX29Q8TEQ0 813 aa14.51□□□□□ -0.09
SHMT2-211ENST00000554310 ATXN2LQ8WWM7 1075 aaKnown RBP14.51□□□□□ -0.09
SHMT2-211ENST00000554310 NFKBIZQ9BYH8 718 aa14.51□□□□□ -0.09
SHMT2-211ENST00000554310 POLR3FQ9H1D9 316 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-211ENST00000554310 PRDM6Q9NQX0 595 aa14.51□□□□□ -0.09
SHMT2-211ENST00000554310 AAASQ9NRG9 546 aa14.51□□□□□ -0.09
SHMT2-211ENST00000554310 A0A0C4DFX4 3053 aa14.51□□□□□ -0.09
SHMT2-211ENST00000554310 MYO7AQ13402 2215 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms