RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 ZDHHC14Q8IZN3 488 aa13.2□□□□□ -0.3
ERBB3-219ENST00000551242 MARCH10Q8NA82 808 aaPredicted RBP13.2□□□□□ -0.3
ERBB3-219ENST00000551242 SH3RF3Q8TEJ3 882 aaPredicted RBP13.2□□□□□ -0.3
ERBB3-219ENST00000551242 ARHGEF26Q96DR7 871 aa13.2□□□□□ -0.3
ERBB3-219ENST00000551242 PIGSQ96S52 555 aa13.2□□□□□ -0.3
ERBB3-219ENST00000551242 RNPEPL1Q9HAU8 725 aa13.2□□□□□ -0.3
ERBB3-219ENST00000551242 ARPP21Q9UBL0 812 aaPredicted RBP13.2□□□□□ -0.3
ERBB3-219ENST00000551242 PRKAG3Q9UGI9 489 aa13.2□□□□□ -0.3
ERBB3-219ENST00000551242 PCDHA2Q9Y5H9 948 aa13.2□□□□□ -0.3
ERBB3-219ENST00000551242 PAPPAQ13219 1627 aa13.2□□□□□ -0.3
ERBB3-219ENST00000551242 A0A0A6YYK5 440 aaPredicted RBP13.2□□□□□ -0.3
ERBB3-219ENST00000551242 PEX11AO75192 247 aa13.2□□□□□ -0.3
ERBB3-219ENST00000551242 UNC5CO95185 931 aa13.2□□□□□ -0.3
ERBB3-219ENST00000551242 CCNB1P14635 433 aa13.2□□□□□ -0.3
ERBB3-219ENST00000551242 PRKCIP41743 596 aa13.2□□□□□ -0.3
ERBB3-219ENST00000551242 FAM47EQ6ZV65 393 aa13.2□□□□□ -0.3
ERBB3-219ENST00000551242 TEX9Q8N6V9 391 aa13.2□□□□□ -0.3
ERBB3-219ENST00000551242 FBF1Q8TES7 1133 aa13.2□□□□□ -0.3
ERBB3-219ENST00000551242 TGS1Q96RS0 853 aaKnown RBP13.2□□□□□ -0.3
ERBB3-219ENST00000551242 RPS6KC1Q96S38 1066 aa13.2□□□□□ -0.3
ERBB3-219ENST00000551242 TRIM7Q9C029 511 aa13.2□□□□□ -0.3
ERBB3-219ENST00000551242 UBA5Q9GZZ9 404 aa13.2□□□□□ -0.3
ERBB3-219ENST00000551242 STMN4Q9H169 189 aaPredicted RBP13.2□□□□□ -0.3
ERBB3-219ENST00000551242 KLHL14Q9P2G3 628 aa13.2□□□□□ -0.3
ERBB3-219ENST00000551242 MTRF1LQ9UGC7 380 aaKnown RBP13.2□□□□□ -0.3
ERBB3-219ENST00000551242 ARMCX3Q9UH62 379 aaPredicted RBP13.2□□□□□ -0.3
ERBB3-219ENST00000551242 C2CD2Q9Y426 696 aa13.2□□□□□ -0.3
ERBB3-219ENST00000551242 RREB1Q92766 1687 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 AFPP02771 609 aaKnown RBP13.19□□□□□ -0.3
ERBB3-219ENST00000551242 CALB2P22676 271 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 GBP1P32455 592 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 MARCKSL1P49006 195 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 TRAF1Q13077 416 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 DHX34Q14147 1143 aaKnown RBP13.19□□□□□ -0.3
ERBB3-219ENST00000551242 LLGL1Q15334 1064 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 PPP1R15BQ5SWA1 713 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 PRELID2Q8N945 189 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 FAM84BQ96KN1 310 aaPredicted RBP13.19□□□□□ -0.3
ERBB3-219ENST00000551242 ATP8A2Q9NTI2 1148 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 RASAL2Q9UJF2 1139 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 A0A1B0GVG6 124 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 O00370 1275 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 RTN3O95197 1032 aaPredicted RBP13.19□□□□□ -0.3
ERBB3-219ENST00000551242 TARSP26639 723 aaKnown RBP13.19□□□□□ -0.3
ERBB3-219ENST00000551242 RNF220Q5VTB9 566 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 TMEM154Q6P9G4 183 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 FOXR2Q6PJQ5 311 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 BTNL9Q6UXG8 535 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 LONP2Q86WA8 852 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 KSR1Q8IVT5 923 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 NUDCD1Q96RS6 583 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 MOV10L1Q9BXT6 1211 aaKnown RBP13.19□□□□□ -0.3
ERBB3-219ENST00000551242 CARD9Q9H257 536 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 SIX2Q9NPC8 291 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 BMP2KQ9NSY1 1161 aaPredicted RBP13.19□□□□□ -0.3
ERBB3-219ENST00000551242 DNAJC17Q9NVM6 304 aaKnown RBP13.19□□□□□ -0.3
ERBB3-219ENST00000551242 COL4A1P02462 1669 aa13.19□□□□□ -0.3
ERBB3-219ENST00000551242 NUP98P52948 1817 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 TPBGLP0DKB5 382 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 VCAM1P19320 739 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 KCNJ1P48048 391 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 NPEPPSP55786 919 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 PPATQ06203 517 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 CAVIN4Q5BKX8 364 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 SPTY2D1Q68D10 685 aaPredicted RBP13.18□□□□□ -0.3
ERBB3-219ENST00000551242 LMNTD2Q8IXW0 634 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 SUPT20HQ8NEM7 779 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 PIGOQ8TEQ8 1089 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 CKAP2Q8WWK9 683 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 RFFLQ8WZ73 363 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 KRT35Q92764 455 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 COA7Q96BR5 231 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 POP1Q99575 1024 aaKnown RBP13.18□□□□□ -0.3
ERBB3-219ENST00000551242 TMEM109Q9BVC6 243 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 RAB34Q9BZG1 259 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 MYLK2Q9H1R3 596 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 SEPT11Q9NVA2 429 aaKnown RBP13.18□□□□□ -0.3
ERBB3-219ENST00000551242 TAS2R14Q9NYV8 317 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 GCNT4Q9P109 453 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 CHORDC1Q9UHD1 332 aaPredicted RBP13.18□□□□□ -0.3
ERBB3-219ENST00000551242 HAO1Q9UJM8 370 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 COG5Q9UP83 839 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 KIAA1024Q9UPX6 916 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 TCRBV7S2A1N4TA0A589 114 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 TMEM110-MUSTN1A8MSY1 372 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 XRCC5P13010 732 aaKnown RBP13.18□□□□□ -0.3
ERBB3-219ENST00000551242 ATP6V1C1P21283 382 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 RFC5P40937 340 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 DRG2P55039 364 aaKnown RBP13.18□□□□□ -0.3
ERBB3-219ENST00000551242 ROR2Q01974 943 aaKnown RBP13.18□□□□□ -0.3
ERBB3-219ENST00000551242 SBK1Q52WX2 424 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 GPBP1Q86WP2 473 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 PALB2Q86YC2 1186 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 MFN1Q8IWA4 741 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 FAM13CQ8NE31 585 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 OLIG1Q8TAK6 271 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 TTC8Q8TAM2 541 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 STK32AQ8WU08 396 aa13.18□□□□□ -0.3
ERBB3-219ENST00000551242 NAP1L3Q99457 506 aaPredicted RBP13.18□□□□□ -0.3
ERBB3-219ENST00000551242 LBHD1Q9BQE6 289 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms