RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 NLRX1Q86UT6 975 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 KIRREL3Q8IZU9 778 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 CFAP57Q96MR6 1250 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 VCPKMTQ9H867 229 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 FGFR1OP2Q9NVK5 253 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 MTMR4Q9NYA4 1195 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 PALM3A6NDB9 673 aaPredicted RBP10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 TCP10L2B9ZVM9 353 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 MAPK13O15264 365 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 FANCGO15287 622 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 YWHAGP61981 247 aaKnown RBP eCLIP10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 ERVK-9P63128 1117 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 SF3B3Q15393 1217 aaKnown RBP10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 AOC3Q16853 763 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 EDRF1Q3B7T1 1238 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 CASC4Q6P4E1 433 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 EPM2AIP1Q7L775 607 aaPredicted RBP10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 PAF1Q8N7H5 531 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 SREK1Q8WXA9 508 aaKnown RBP10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 VTI1AQ96AJ9 217 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 TMEM206Q9H813 350 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 DBNDD1Q9H9R9 158 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 MON2Q7Z3U7 1717 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 KRT19P08727 400 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 ITIH3Q06033 890 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 AP3B2Q13367 1082 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 MEI1Q5TIA1 1274 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 SDCCAG8Q86SQ7 713 aaPredicted RBP10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 DAGLBQ8NCG7 672 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 MTRQ99707 1265 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 LBHD1Q9BQE6 289 aaPredicted RBP10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 PCDHB4Q9Y5E5 795 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 CAND2O75155 1236 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 AGTP01019 485 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 MSH2P43246 934 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 SCTRP47872 440 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 PEX3P56589 373 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 LGSNQ5TDP6 509 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 LRRC34Q8IZ02 419 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 FAM20AQ96MK3 541 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 EMSYQ7Z589 1322 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 A0A0G2JND7 137 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 ZNF233A6NK53 670 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 KLRC4O43908 158 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 SPAG7O75391 227 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 POLE2P56282 527 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 LMNB2Q03252 620 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 ZC2HC1CQ53FD0 456 aaPredicted RBP10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 BSPRYQ5W0U4 402 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 ZNF571Q7Z3V5 609 aaPredicted RBP10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 SAAL1Q96ER3 474 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 LRRC37BQ96QE4 947 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 EIF2AK1Q9BQI3 630 aaKnown RBP10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 FAM53CQ9NYF3 392 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 DCTN4Q9UJW0 460 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 ALG6Q9Y672 507 aa10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.97□□□□□ -0.65
SMARCC2-209ENST00000550164 HSPA9P38646 679 aaKnown RBP10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 PIK3CAP42336 1068 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 EVX2Q03828 476 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 ZNF543Q08ER8 600 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 SPARCL1Q14515 664 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 RBBP5Q15291 538 aaKnown RBP10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 SPATA21Q7Z572 469 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 GLIS3Q8NEA6 775 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 CSRNP1Q96S65 589 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 AGPAT1Q99943 283 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 GEMIN8Q9NWZ8 242 aaKnown RBP10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 DDX20Q9UHI6 824 aaKnown RBP10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 CCPG1Q9ULG6 757 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 USP15Q9Y4E8 981 aaPredicted RBP10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 OPHN1O60890 802 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 KRT1P04264 644 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 PLS3P13797 630 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 KRT17Q04695 432 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 BBS9Q3SYG4 887 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 PPP1R18Q6NYC8 613 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 FBXO25Q8TCJ0 367 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 NUDT12Q9BQG2 462 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 SH2D3AQ9BRG2 576 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 STK33Q9BYT3 514 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 NOD2Q9HC29 1040 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 OSGEPQ9NPF4 335 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 ANKFY1Q9P2R3 1169 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 SUCLA2Q9P2R7 463 aaPredicted RBP10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 FLT1P17948 1338 aa10.96□□□□□ -0.65
SMARCC2-209ENST00000550164 ATMINO43313 823 aaPredicted RBP10.96□□□□□ -0.66
SMARCC2-209ENST00000550164 SERPINB2P05120 415 aa10.96□□□□□ -0.66
SMARCC2-209ENST00000550164 FMO5P49326 533 aa10.96□□□□□ -0.66
SMARCC2-209ENST00000550164 BPIFB4P59827 614 aa10.96□□□□□ -0.66
SMARCC2-209ENST00000550164 SKOR1P84550 965 aa10.96□□□□□ -0.66
SMARCC2-209ENST00000550164 CAPRIN2Q6IMN6 1127 aaKnown RBP10.96□□□□□ -0.66
SMARCC2-209ENST00000550164 SUGP1Q8IWZ8 645 aaKnown RBP10.96□□□□□ -0.66
SMARCC2-209ENST00000550164 XXYLT1Q8NBI6 393 aa10.96□□□□□ -0.66
SMARCC2-209ENST00000550164 RNF25Q96BH1 459 aaPredicted RBP10.96□□□□□ -0.66
SMARCC2-209ENST00000550164 C9orf72Q96LT7 481 aa10.96□□□□□ -0.66
SMARCC2-209ENST00000550164 IL17RBQ9NRM6 502 aa10.96□□□□□ -0.66
SMARCC2-209ENST00000550164 PI4KBQ9UBF8 816 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms