RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 POU5F1BQ06416 359 aa19.17■□□□□ 0.66
LETMD1-220ENST00000549686 MARCH8Q5T0T0 291 aa19.17■□□□□ 0.66
LETMD1-220ENST00000549686 CENPPQ6IPU0 288 aa19.17■□□□□ 0.66
LETMD1-220ENST00000549686 NFRKBQ6P4R8 1299 aa19.17■□□□□ 0.66
LETMD1-220ENST00000549686 METTL13Q8N6R0 699 aa19.17■□□□□ 0.66
LETMD1-220ENST00000549686 RNF214Q8ND24 703 aa19.17■□□□□ 0.66
LETMD1-220ENST00000549686 TRAPPC12Q8WVT3 735 aa19.17■□□□□ 0.66
LETMD1-220ENST00000549686 STRA6Q9BX79 667 aa19.17■□□□□ 0.66
LETMD1-220ENST00000549686 RNF208Q9H0X6 261 aa19.17■□□□□ 0.66
LETMD1-220ENST00000549686 C2orf40Q9H1Z8 148 aa19.17■□□□□ 0.66
LETMD1-220ENST00000549686 TMEM206Q9H813 350 aa19.17■□□□□ 0.66
LETMD1-220ENST00000549686 POLD4Q9HCU8 107 aa19.17■□□□□ 0.66
LETMD1-220ENST00000549686 SETD4Q9NVD3 440 aa19.17■□□□□ 0.66
LETMD1-220ENST00000549686 CTNND2Q9UQB3 1225 aa19.17■□□□□ 0.66
LETMD1-220ENST00000549686 SMIM35A0A1B0GVV1 85 aa19.16■□□□□ 0.66
LETMD1-220ENST00000549686 CCDC169A6NNP5 214 aa19.16■□□□□ 0.66
LETMD1-220ENST00000549686 KBTBD13C9JR72 458 aa19.16■□□□□ 0.66
LETMD1-220ENST00000549686 DNM1LO00429 736 aa19.16■□□□□ 0.66
LETMD1-220ENST00000549686 PPP1R37O75864 691 aa19.16■□□□□ 0.66
LETMD1-220ENST00000549686 MYCNP04198 464 aaPredicted RBP19.16■□□□□ 0.66
LETMD1-220ENST00000549686 NMT1P30419 496 aaKnown RBP19.16■□□□□ 0.66
LETMD1-220ENST00000549686 EFNA5P52803 228 aa19.16■□□□□ 0.66
LETMD1-220ENST00000549686 SNRPFP62306 86 aaKnown RBP19.16■□□□□ 0.66
LETMD1-220ENST00000549686 ADAM17P78536 824 aa19.16■□□□□ 0.66
LETMD1-220ENST00000549686 KNOP1Q1ED39 458 aaKnown RBP19.16■□□□□ 0.66
LETMD1-220ENST00000549686 SPATA1Q5VX52 437 aa19.16■□□□□ 0.66
LETMD1-220ENST00000549686 HAUS6Q7Z4H7 955 aa19.16■□□□□ 0.66
LETMD1-220ENST00000549686 DHX40Q8IX18 779 aaKnown RBP19.16■□□□□ 0.66
LETMD1-220ENST00000549686 AOPEPQ8N6M6 819 aa19.16■□□□□ 0.66
LETMD1-220ENST00000549686 TMEM161BQ8NDZ6 487 aa19.16■□□□□ 0.66
LETMD1-220ENST00000549686 DEPTORQ8TB45 409 aa19.16■□□□□ 0.66
LETMD1-220ENST00000549686 GOLGA5Q8TBA6 731 aa19.16■□□□□ 0.66
LETMD1-220ENST00000549686 NOC3LQ8WTT2 800 aaKnown RBP19.16■□□□□ 0.66
LETMD1-220ENST00000549686 PRPF31Q8WWY3 499 aaKnown RBP19.16■□□□□ 0.66
LETMD1-220ENST00000549686 ZNF333Q96JL9 665 aa19.16■□□□□ 0.66
LETMD1-220ENST00000549686 GLT1D1Q96MS3 346 aa19.16■□□□□ 0.66
LETMD1-220ENST00000549686 PRDM10Q9NQV6 1147 aa19.16■□□□□ 0.66
LETMD1-220ENST00000549686 EXOC7Q9UPT5 735 aa19.16■□□□□ 0.66
LETMD1-220ENST00000549686 MAPK8IP1Q9UQF2 711 aa19.16■□□□□ 0.66
LETMD1-220ENST00000549686 FGFR1OPO95684 399 aaKnown RBP19.15■□□□□ 0.66
LETMD1-220ENST00000549686 MYBP10242 640 aa19.15■□□□□ 0.66
LETMD1-220ENST00000549686 MRE11P49959 708 aa19.15■□□□□ 0.66
LETMD1-220ENST00000549686 CASP5P51878 434 aa19.15■□□□□ 0.66
LETMD1-220ENST00000549686 CHMP4BP1P59074 171 aa19.15■□□□□ 0.66
LETMD1-220ENST00000549686 LAMTOR4Q0VGL1 99 aa19.15■□□□□ 0.66
LETMD1-220ENST00000549686 MKRN4PQ13434 485 aaPredicted RBP19.15■□□□□ 0.66
LETMD1-220ENST00000549686 NBPF20Q3BBV1 942 aa19.15■□□□□ 0.66
LETMD1-220ENST00000549686 TAF2Q6P1X5 1199 aa19.15■□□□□ 0.66
LETMD1-220ENST00000549686 LUZP1Q86V48 1076 aa19.15■□□□□ 0.66
LETMD1-220ENST00000549686 LRRC71Q8N4P6 559 aa19.15■□□□□ 0.66
LETMD1-220ENST00000549686 ASAP3Q8TDY4 903 aa19.15■□□□□ 0.66
LETMD1-220ENST00000549686 BSNDQ8WZ55 320 aa19.15■□□□□ 0.66
LETMD1-220ENST00000549686 ACCSQ96QU6 501 aa19.15■□□□□ 0.66
LETMD1-220ENST00000549686 NFKBIZQ9BYH8 718 aa19.15■□□□□ 0.66
LETMD1-220ENST00000549686 FGFBP2Q9BYJ0 223 aa19.15■□□□□ 0.66
LETMD1-220ENST00000549686 CGNQ9P2M7 1197 aaKnown RBP19.15■□□□□ 0.66
LETMD1-220ENST00000549686 ARHGAP28Q9P2N2 729 aa19.15■□□□□ 0.66
LETMD1-220ENST00000549686 HDAC6Q9UBN7 1215 aa19.15■□□□□ 0.66
LETMD1-220ENST00000549686 GTF2IRD1Q9UHL9 959 aa19.15■□□□□ 0.66
LETMD1-220ENST00000549686 OGDHLQ9ULD0 1010 aa19.15■□□□□ 0.66
LETMD1-220ENST00000549686 PHF24Q9UPV7 400 aa19.15■□□□□ 0.66
LETMD1-220ENST00000549686 LRRIQ4A6NIV6 560 aa19.14■□□□□ 0.65
LETMD1-220ENST00000549686 PDXKO00764 312 aa19.14■□□□□ 0.65
LETMD1-220ENST00000549686 SLC16A4O15374 487 aa19.14■□□□□ 0.65
LETMD1-220ENST00000549686 PRPF6O94906 941 aaKnown RBP19.14■□□□□ 0.65
LETMD1-220ENST00000549686 CLCN3P51790 818 aa19.14■□□□□ 0.65
LETMD1-220ENST00000549686 SOX10P56693 466 aa19.14■□□□□ 0.65
LETMD1-220ENST00000549686 MTFR1Q15390 333 aa19.14■□□□□ 0.65
LETMD1-220ENST00000549686 TPD52L1Q16890 204 aaPredicted RBP19.14■□□□□ 0.65
LETMD1-220ENST00000549686 HS2ST1Q7LGA3 356 aa19.14■□□□□ 0.65
LETMD1-220ENST00000549686 ZBTB8OSQ8IWT0 167 aa19.14■□□□□ 0.65
LETMD1-220ENST00000549686 NME8Q8N427 588 aa19.14■□□□□ 0.65
LETMD1-220ENST00000549686 GLIS3Q8NEA6 775 aa19.14■□□□□ 0.65
LETMD1-220ENST00000549686 DEFB118Q96PH6 123 aa19.14■□□□□ 0.65
LETMD1-220ENST00000549686 TMEM134Q9H6X4 195 aa19.14■□□□□ 0.65
LETMD1-220ENST00000549686 GRPEL1Q9HAV7 217 aa19.14■□□□□ 0.65
LETMD1-220ENST00000549686 TYW1Q9NV66 732 aaKnown RBP19.14■□□□□ 0.65
LETMD1-220ENST00000549686 TRAF3IP3Q9Y228 551 aa19.14■□□□□ 0.65
LETMD1-220ENST00000549686 CEP350Q5VT06 3117 aa19.14■□□□□ 0.65
LETMD1-220ENST00000549686 DENND3A2RUS2 1198 aa19.13■□□□□ 0.65
LETMD1-220ENST00000549686 CALUO43852 315 aaPredicted RBP19.13■□□□□ 0.65
LETMD1-220ENST00000549686 CYP2C9P11712 490 aa19.13■□□□□ 0.65
LETMD1-220ENST00000549686 DRP2Q13474 957 aa19.13■□□□□ 0.65
LETMD1-220ENST00000549686 CAPSQ13938 189 aa19.13■□□□□ 0.65
LETMD1-220ENST00000549686 NCAPHQ15003 741 aa19.13■□□□□ 0.65
LETMD1-220ENST00000549686 EDRF1Q3B7T1 1238 aa19.13■□□□□ 0.65
LETMD1-220ENST00000549686 CDCA2Q69YH5 1023 aaPredicted RBP19.13■□□□□ 0.65
LETMD1-220ENST00000549686 TTI2Q6NXR4 508 aa19.13■□□□□ 0.65
LETMD1-220ENST00000549686 ZNF410Q86VK4 478 aa19.13■□□□□ 0.65
LETMD1-220ENST00000549686 RHPN2Q8IUC4 686 aa19.13■□□□□ 0.65
LETMD1-220ENST00000549686 MAP4K3Q8IVH8 894 aa19.13■□□□□ 0.65
LETMD1-220ENST00000549686 VTI1AQ96AJ9 217 aa19.13■□□□□ 0.65
LETMD1-220ENST00000549686 KCTD10Q9H3F6 313 aa19.13■□□□□ 0.65
LETMD1-220ENST00000549686 SEMA6BQ9H3T3 888 aa19.13■□□□□ 0.65
LETMD1-220ENST00000549686 TBX20Q9UMR3 447 aa19.13■□□□□ 0.65
LETMD1-220ENST00000549686 AKT3Q9Y243 479 aa19.13■□□□□ 0.65
LETMD1-220ENST00000549686 NFE2L3Q9Y4A8 694 aa19.13■□□□□ 0.65
LETMD1-220ENST00000549686 SCN10AQ9Y5Y9 1956 aa19.12■□□□□ 0.65
LETMD1-220ENST00000549686 GJB1P08034 283 aa19.12■□□□□ 0.65
LETMD1-220ENST00000549686 PHKA2P46019 1235 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms