RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 FAM47CQ5HY64 1035 aa3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 STRIP1Q5VSL9 837 aa3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 ZKSCAN2Q63HK3 967 aa3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 KLHDC10Q6PID8 442 aa3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 ST13P5Q8NFI4 369 aaPredicted RBP3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 THAP3Q8WTV1 239 aaPredicted RBP3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 ZNF669Q96BR6 464 aaPredicted RBP3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 GPR87Q9BY21 358 aa3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 ASB1Q9Y576 335 aa3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 MRVI1Q9Y6F6 885 aa3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 NPATQ14207 1427 aa3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 RNF17Q9BXT8 1623 aaKnown RBP3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 TCRBV5S4A2TA0A5A2 114 aa3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 MASP2O00187 686 aa3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 IPO13O94829 963 aaKnown RBP3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 C4BPAP04003 597 aaKnown RBP3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 APEX1P27695 318 aaKnown RBP3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 KRTAP10-11P60412 298 aa3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 CRY1Q16526 586 aa3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 GAGE13Q4V321 117 aa3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 RABL3Q5HYI8 236 aa3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 HTR3DQ70Z44 454 aa3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 RHOUQ7L0Q8 258 aa3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 C16orf59Q7L2K0 433 aa3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 MTDHQ86UE4 582 aaKnown RBP3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 ADGRG3Q86Y34 549 aa3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 ZC3H7AQ8IWR0 971 aaKnown RBP3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 VWDEQ8N2E2 1590 aa3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 ZNF276Q8N554 614 aa3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 OSBP2Q969R2 916 aa3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 ZNF428Q96B54 188 aa3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 ACBD3Q9H3P7 528 aa3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 TOR3AQ9H497 397 aa3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 AGO3Q9H9G7 860 aaKnown RBP3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 CATSPERZQ9NTU4 200 aa3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 REREQ9P2R6 1566 aa3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 FZD1Q9UP38 647 aa3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 CEP170BQ9Y4F5 1589 aaPredicted RBP3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 AGLP35573 1532 aa3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 STRCP1A6NGW2 1772 aa3.74□□□□□ -1.81
DEPDC4-204ENST00000547823 NEURL4Q96JN8 1562 aa3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 DIP2CQ9Y2E4 1556 aa3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 SCAPERQ9BY12 1400 aa3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 CNTLNQ9NXG0 1405 aa3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 INO80B-WBP1J3KQ70 363 aa3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 B3GALT2O43825 422 aa3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 RPS6KA4O75676 772 aa3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 MPIG6BO95866 241 aa3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 ABHD16AO95870 558 aa3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 ITGB1P05556 798 aa3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 MC4RP32245 332 aa3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 ELAVL1Q15717 326 aaKnown RBP3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 MBNL2Q5VZF2 373 aaKnown RBP3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 ZNF772Q68DY9 489 aaPredicted RBP3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 Q6ZRM9 215 aa3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 LRRC55Q6ZSA7 311 aa3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 PTRH1Q86Y79 214 aaKnown RBP3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 NELL1Q92832 810 aa3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 GCDHQ92947 438 aaPredicted RBP3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 AMNQ9BXJ7 453 aa3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 INO80BQ9C086 356 aaPredicted RBP3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 ARHGEF4Q9NR80 690 aa3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 HECAQ9UBI9 543 aaPredicted RBP3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 LRRC7Q96NW7 1537 aa3.73□□□□□ -1.81
DEPDC4-204ENST00000547823 ZNF561-AS1K7EIQ3 104 aa3.72□□□□□ -1.81
DEPDC4-204ENST00000547823 MFAP3LO75121 409 aa3.72□□□□□ -1.81
DEPDC4-204ENST00000547823 STAT5BP51692 787 aa3.72□□□□□ -1.81
DEPDC4-204ENST00000547823 ADCY7P51828 1080 aa3.72□□□□□ -1.81
DEPDC4-204ENST00000547823 DDR2Q16832 855 aa3.72□□□□□ -1.81
DEPDC4-204ENST00000547823 KCNV1Q6PIU1 500 aa3.72□□□□□ -1.81
DEPDC4-204ENST00000547823 FAM111BQ6SJ93 734 aa3.72□□□□□ -1.81
DEPDC4-204ENST00000547823 PROKR1Q8TCW9 393 aa3.72□□□□□ -1.81
DEPDC4-204ENST00000547823 PTPRN2Q92932 1015 aa3.72□□□□□ -1.81
DEPDC4-204ENST00000547823 TCF25Q9BQ70 676 aa3.72□□□□□ -1.81
DEPDC4-204ENST00000547823 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.72□□□□□ -1.81
DEPDC4-204ENST00000547823 KCNH7Q9NS40 1196 aa3.72□□□□□ -1.81
DEPDC4-204ENST00000547823 TRPS1Q9UHF7 1281 aa3.72□□□□□ -1.81
DEPDC4-204ENST00000547823 ABCA6Q8N139 1617 aa3.72□□□□□ -1.81
DEPDC4-204ENST00000547823 RAPGEF6Q8TEU7 1601 aa3.72□□□□□ -1.81
DEPDC4-204ENST00000547823 XIRP1Q702N8 1843 aaKnown RBP3.72□□□□□ -1.81
DEPDC4-204ENST00000547823 SYNMO15061 1565 aa3.72□□□□□ -1.81
DEPDC4-204ENST00000547823 XDHP47989 1333 aa3.71□□□□□ -1.81
DEPDC4-204ENST00000547823 LRP5O75197 1615 aa3.71□□□□□ -1.82
DEPDC4-204ENST00000547823 DNMT1P26358 1616 aaKnown RBP3.71□□□□□ -1.82
DEPDC4-204ENST00000547823 ARVCFO00192 962 aa3.71□□□□□ -1.82
DEPDC4-204ENST00000547823 AMY2AP04746 511 aa3.71□□□□□ -1.82
DEPDC4-204ENST00000547823 AMY2BP19961 511 aa3.71□□□□□ -1.82
DEPDC4-204ENST00000547823 LACTBP83111 547 aaPredicted RBP3.71□□□□□ -1.82
DEPDC4-204ENST00000547823 DCAF17Q5H9S7 520 aaPredicted RBP3.71□□□□□ -1.82
DEPDC4-204ENST00000547823 NAIF1Q69YI7 327 aaPredicted RBP3.71□□□□□ -1.82
DEPDC4-204ENST00000547823 GAREM2Q75VX8 874 aa3.71□□□□□ -1.82
DEPDC4-204ENST00000547823 HIPK4Q8NE63 616 aa3.71□□□□□ -1.82
DEPDC4-204ENST00000547823 E2F7Q96AV8 911 aa3.71□□□□□ -1.82
DEPDC4-204ENST00000547823 C16orf92Q96LL3 132 aa3.71□□□□□ -1.82
DEPDC4-204ENST00000547823 IPO9Q96P70 1041 aaKnown RBP3.71□□□□□ -1.82
DEPDC4-204ENST00000547823 UCKL1Q9NWZ5 548 aa3.71□□□□□ -1.82
DEPDC4-204ENST00000547823 PODXL2Q9NZ53 605 aa3.71□□□□□ -1.82
DEPDC4-204ENST00000547823 SAE1Q9UBE0 346 aaPredicted RBP3.71□□□□□ -1.82
DEPDC4-204ENST00000547823 ZMYM3Q14202 1370 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms