RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 HAUS3Q68CZ6 603 aa16.47■□□□□ 0.23
CCDC38-205ENST00000546947 CATSPER3Q86XQ3 398 aa16.47■□□□□ 0.23
CCDC38-205ENST00000546947 KSR1Q8IVT5 923 aa16.47■□□□□ 0.23
CCDC38-205ENST00000546947 PRPF31Q8WWY3 499 aaKnown RBP16.47■□□□□ 0.23
CCDC38-205ENST00000546947 TMEM143Q96AN5 459 aa16.47■□□□□ 0.23
CCDC38-205ENST00000546947 ATP6V0A4Q9HBG4 840 aa16.47■□□□□ 0.23
CCDC38-205ENST00000546947 CHST12Q9NRB3 414 aa16.47■□□□□ 0.23
CCDC38-205ENST00000546947 DACT1Q9NYF0 836 aa16.47■□□□□ 0.23
CCDC38-205ENST00000546947 STK24Q9Y6E0 443 aa16.47■□□□□ 0.23
CCDC38-205ENST00000546947 PRRC2BQ5JSZ5 2229 aaKnown RBP16.46■□□□□ 0.23
CCDC38-205ENST00000546947 HOXA2O43364 376 aa16.46■□□□□ 0.23
CCDC38-205ENST00000546947 MED24O75448 989 aa16.46■□□□□ 0.23
CCDC38-205ENST00000546947 IBSPP21815 317 aaPredicted RBP16.46■□□□□ 0.23
CCDC38-205ENST00000546947 PRPHP41219 470 aa16.46■□□□□ 0.23
CCDC38-205ENST00000546947 LAMTOR4Q0VGL1 99 aa16.46■□□□□ 0.23
CCDC38-205ENST00000546947 PTGDRQ13258 359 aa16.46■□□□□ 0.23
CCDC38-205ENST00000546947 PDIA5Q14554 519 aa16.46■□□□□ 0.23
CCDC38-205ENST00000546947 MXD4Q14582 209 aaPredicted RBP16.46■□□□□ 0.23
CCDC38-205ENST00000546947 PTPROQ16827 1216 aa16.46■□□□□ 0.23
CCDC38-205ENST00000546947 PAN2Q504Q3 1202 aaKnown RBP16.46■□□□□ 0.23
CCDC38-205ENST00000546947 LARP1BQ659C4 914 aaKnown RBP16.46■□□□□ 0.23
CCDC38-205ENST00000546947 SRGAP1Q7Z6B7 1085 aa16.46■□□□□ 0.23
CCDC38-205ENST00000546947 FERMT3Q86UX7 667 aa16.46■□□□□ 0.23
CCDC38-205ENST00000546947 PIGOQ8TEQ8 1089 aa16.46■□□□□ 0.23
CCDC38-205ENST00000546947 NACC1Q96RE7 527 aa16.46■□□□□ 0.23
CCDC38-205ENST00000546947 C11orf84Q9BUA3 381 aaPredicted RBP16.46■□□□□ 0.23
CCDC38-205ENST00000546947 PLVAPQ9BX97 442 aa16.46■□□□□ 0.23
CCDC38-205ENST00000546947 RAB34Q9BZG1 259 aa16.46■□□□□ 0.23
CCDC38-205ENST00000546947 IFT122Q9HBG6 1241 aa16.46■□□□□ 0.23
CCDC38-205ENST00000546947 XPNPEP1Q9NQW7 623 aa16.46■□□□□ 0.23
CCDC38-205ENST00000546947 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.46■□□□□ 0.23
CCDC38-205ENST00000546947 BMP2KQ9NSY1 1161 aaPredicted RBP16.46■□□□□ 0.23
CCDC38-205ENST00000546947 THEGQ9P2T0 379 aa16.46■□□□□ 0.23
CCDC38-205ENST00000546947 DBR1Q9UK59 544 aaKnown RBP16.46■□□□□ 0.23
CCDC38-205ENST00000546947 MRPL42Q9Y6G3 142 aaKnown RBP16.46■□□□□ 0.23
CCDC38-205ENST00000546947 SPTBN5Q9NRC6 3674 aaKnown RBP16.46■□□□□ 0.23
CCDC38-205ENST00000546947 ATG2AQ2TAZ0 1938 aa16.45■□□□□ 0.22
CCDC38-205ENST00000546947 CSDE1O75534 798 aaKnown RBP16.45■□□□□ 0.22
CCDC38-205ENST00000546947 NAALADL2Q58DX5 795 aa16.45■□□□□ 0.22
CCDC38-205ENST00000546947 ECHDC2Q86YB7 292 aa16.45■□□□□ 0.22
CCDC38-205ENST00000546947 P2RX5Q93086 422 aa16.45■□□□□ 0.22
CCDC38-205ENST00000546947 MRPL38Q96DV4 380 aaKnown RBP16.45■□□□□ 0.22
CCDC38-205ENST00000546947 TRAIPQ9BWF2 469 aa16.45■□□□□ 0.22
CCDC38-205ENST00000546947 PRDM6Q9NQX0 595 aa16.45■□□□□ 0.22
CCDC38-205ENST00000546947 LRWD1Q9UFC0 647 aa16.45■□□□□ 0.22
CCDC38-205ENST00000546947 XIRP2A4UGR9 3374 aa16.44■□□□□ 0.22
CCDC38-205ENST00000546947 A0A0C4DFX4 3053 aa16.44■□□□□ 0.22
CCDC38-205ENST00000546947 A0A0U1RQF3 1178 aa16.44■□□□□ 0.22
CCDC38-205ENST00000546947 TBKBP1A7MCY6 615 aa16.44■□□□□ 0.22
CCDC38-205ENST00000546947 EOMESO95936 686 aa16.44■□□□□ 0.22
CCDC38-205ENST00000546947 SRGAP2CP0DJJ0 459 aa16.44■□□□□ 0.22
CCDC38-205ENST00000546947 SKIP12755 728 aa16.44■□□□□ 0.22
CCDC38-205ENST00000546947 GATMP50440 423 aa16.44■□□□□ 0.22
CCDC38-205ENST00000546947 POU5F1BQ06416 359 aa16.44■□□□□ 0.22
CCDC38-205ENST00000546947 TFDP1Q14186 410 aa16.44■□□□□ 0.22
CCDC38-205ENST00000546947 SKIV2LQ15477 1246 aaKnown RBP16.44■□□□□ 0.22
CCDC38-205ENST00000546947 FAM102BQ5T8I3 360 aa16.44■□□□□ 0.22
CCDC38-205ENST00000546947 CATSPER4Q7RTX7 472 aa16.44■□□□□ 0.22
CCDC38-205ENST00000546947 IGSF22Q8N9C0 903 aa16.44■□□□□ 0.22
CCDC38-205ENST00000546947 RNF149Q8NC42 400 aa16.44■□□□□ 0.22
CCDC38-205ENST00000546947 ATXN2LQ8WWM7 1075 aaKnown RBP16.44■□□□□ 0.22
CCDC38-205ENST00000546947 LMAN2LQ9H0V9 348 aa16.44■□□□□ 0.22
CCDC38-205ENST00000546947 USO1O60763 962 aaKnown RBP16.43■□□□□ 0.22
CCDC38-205ENST00000546947 ARL2P36404 184 aa16.43■□□□□ 0.22
CCDC38-205ENST00000546947 PCBP1Q15365 356 aaKnown RBP eCLIP16.43■□□□□ 0.22
CCDC38-205ENST00000546947 POTEGQ6S5H5 508 aa16.43■□□□□ 0.22
CCDC38-205ENST00000546947 DTHD1Q6ZMT9 781 aa16.43■□□□□ 0.22
CCDC38-205ENST00000546947 MCPH1Q8NEM0 835 aa16.43■□□□□ 0.22
CCDC38-205ENST00000546947 TMEM117Q9H0C3 514 aa16.43■□□□□ 0.22
CCDC38-205ENST00000546947 AGPAT5Q9NUQ2 364 aa16.43■□□□□ 0.22
CCDC38-205ENST00000546947 COG5Q9UP83 839 aa16.43■□□□□ 0.22
CCDC38-205ENST00000546947 PIN4Q9Y237 131 aaKnown RBP16.43■□□□□ 0.22
CCDC38-205ENST00000546947 PLXNA4Q9HCM2 1894 aa16.42■□□□□ 0.22
CCDC38-205ENST00000546947 A0A087WWV3 80 aa16.42■□□□□ 0.22
CCDC38-205ENST00000546947 FGFR1P11362 822 aa16.42■□□□□ 0.22
CCDC38-205ENST00000546947 PDCP20941 246 aa16.42■□□□□ 0.22
CCDC38-205ENST00000546947 CCT6AP40227 531 aaKnown RBP16.42■□□□□ 0.22
CCDC38-205ENST00000546947 PHKA2P46019 1235 aa16.42■□□□□ 0.22
CCDC38-205ENST00000546947 RAB27AP51159 221 aa16.42■□□□□ 0.22
CCDC38-205ENST00000546947 PTENP60484 403 aa16.42■□□□□ 0.22
CCDC38-205ENST00000546947 ATP2C1P98194 919 aaPredicted RBP16.42■□□□□ 0.22
CCDC38-205ENST00000546947 TIGD5Q53EQ6 642 aa16.42■□□□□ 0.22
CCDC38-205ENST00000546947 SPOUT1Q5T280 376 aaKnown RBP16.42■□□□□ 0.22
CCDC38-205ENST00000546947 TWF2Q6IBS0 349 aaKnown RBP16.42■□□□□ 0.22
CCDC38-205ENST00000546947 BRAPQ7Z569 592 aa16.42■□□□□ 0.22
CCDC38-205ENST00000546947 ZNF598Q86UK7 904 aaKnown RBP16.42■□□□□ 0.22
CCDC38-205ENST00000546947 IFNLR1Q8IU57 520 aaPredicted RBP16.42■□□□□ 0.22
CCDC38-205ENST00000546947 ABI1Q8IZP0 508 aa16.42■□□□□ 0.22
CCDC38-205ENST00000546947 RSPH1Q8WYR4 309 aa16.42■□□□□ 0.22
CCDC38-205ENST00000546947 INTS4Q96HW7 963 aaKnown RBP16.42■□□□□ 0.22
CCDC38-205ENST00000546947 NFKBIZQ9BYH8 718 aa16.42■□□□□ 0.22
CCDC38-205ENST00000546947 AAASQ9NRG9 546 aa16.42■□□□□ 0.22
CCDC38-205ENST00000546947 RNF19AQ9NV58 838 aa16.42■□□□□ 0.22
CCDC38-205ENST00000546947 ARHGEF35A5YM69 484 aa16.41■□□□□ 0.22
CCDC38-205ENST00000546947 ATF7P17544 494 aaPredicted RBP16.41■□□□□ 0.22
CCDC38-205ENST00000546947 AXLP30530 894 aa16.41■□□□□ 0.22
CCDC38-205ENST00000546947 MRPS5P82675 430 aaKnown RBP16.41■□□□□ 0.22
CCDC38-205ENST00000546947 CAPSQ13938 189 aa16.41■□□□□ 0.22
CCDC38-205ENST00000546947 TJAP1Q5JTD0 557 aa16.41■□□□□ 0.22
CCDC38-205ENST00000546947 KRT79Q5XKE5 535 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms