RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 RPL21P46778 160 aaKnown RBP15.34■□□□□ 0.05
SRP54-202ENST00000546080 NOVP48745 357 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 CASP4P49662 377 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 IRX1P78414 480 aaPredicted RBP15.34■□□□□ 0.05
SRP54-202ENST00000546080 UBAP2Q5T6F2 1119 aaKnown RBP15.34■□□□□ 0.05
SRP54-202ENST00000546080 BZW1Q7L1Q6 419 aaKnown RBP15.34■□□□□ 0.05
SRP54-202ENST00000546080 EPM2AIP1Q7L775 607 aaPredicted RBP15.34■□□□□ 0.05
SRP54-202ENST00000546080 ARHGEF26Q96DR7 871 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 HOMER3Q9NSC5 361 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 TMOD4Q9NZQ9 345 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 ROBO1Q9Y6N7 1651 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 PODXLO00592 558 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 RIPK2O43353 540 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 DIAPH2O60879 1101 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 HSPA6P17066 643 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 VCAM1P19320 739 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 CCND1P24385 295 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 CALRP27797 417 aaKnown RBP15.34■□□□□ 0.05
SRP54-202ENST00000546080 PTGIRP43119 386 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 MAP2K1Q02750 393 aaPredicted RBP15.34■□□□□ 0.05
SRP54-202ENST00000546080 CCDC38Q502W7 563 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 BARGINQ6ZT62 677 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 OLIG1Q8TAK6 271 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 KLHL29Q96CT2 875 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 REEP2Q9BRK0 252 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 JMJD4Q9H9V9 463 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 SEPT11Q9NVA2 429 aaKnown RBP15.34■□□□□ 0.05
SRP54-202ENST00000546080 SLAIN2Q9P270 581 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 DBR1Q9UK59 544 aaKnown RBP15.34■□□□□ 0.05
SRP54-202ENST00000546080 PCDHB13Q9Y5F0 798 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 ASTN1O14525 1302 aa15.33■□□□□ 0.04
SRP54-202ENST00000546080 IRS2Q9Y4H2 1338 aa15.33■□□□□ 0.04
SRP54-202ENST00000546080 PPP1R11O60927 126 aaPredicted RBP15.33■□□□□ 0.04
SRP54-202ENST00000546080 COPS2P61201 443 aa15.33■□□□□ 0.04
SRP54-202ENST00000546080 AUHQ13825 339 aaKnown RBP15.33■□□□□ 0.04
SRP54-202ENST00000546080 GALNTL6Q49A17 601 aa15.33■□□□□ 0.04
SRP54-202ENST00000546080 NAIF1Q69YI7 327 aaPredicted RBP15.33■□□□□ 0.04
SRP54-202ENST00000546080 MGARPQ8TDB4 240 aa15.33■□□□□ 0.04
SRP54-202ENST00000546080 ALG3Q92685 438 aa15.33■□□□□ 0.04
SRP54-202ENST00000546080 PRCCQ92733 491 aaPredicted RBP15.33■□□□□ 0.04
SRP54-202ENST00000546080 IFT74Q96LB3 600 aa15.33■□□□□ 0.04
SRP54-202ENST00000546080 ZNF570Q96NI8 536 aa15.33■□□□□ 0.04
SRP54-202ENST00000546080 THAP2Q9H0W7 228 aa15.33■□□□□ 0.04
SRP54-202ENST00000546080 TAOK3Q9H2K8 898 aa15.33■□□□□ 0.04
SRP54-202ENST00000546080 FGFR1OP2Q9NVK5 253 aa15.33■□□□□ 0.04
SRP54-202ENST00000546080 FAM170AA1A519 330 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 TCP11X1B4DZS4 312 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 CLIC2O15247 247 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 GCKP35557 465 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 PABPC4Q13310 644 aaKnown RBP eCLIP15.32■□□□□ 0.041e-8■■□□□ 12.5
SRP54-202ENST00000546080 DRAP1Q14919 205 aaPredicted RBP15.32■□□□□ 0.04
SRP54-202ENST00000546080 LRRC14Q15048 493 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 TNFAIP8L3Q5GJ75 292 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 AADACL2Q6P093 401 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 ADGRF4Q8IZF3 695 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 SPDL1Q96EA4 605 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 STK33Q9BYT3 514 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 PSTPIP2Q9H939 334 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 GCNT3O95395 438 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 RARGP13631 454 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 PLCG2P16885 1265 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 TNFAIP3P21580 790 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 EIF6P56537 245 aaKnown RBP15.32■□□□□ 0.04
SRP54-202ENST00000546080 BNIP1Q12981 228 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 TBC1D9BQ66K14 1250 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 MFSD5Q6N075 450 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 EXOC3L1Q86VI1 746 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 UBL4BQ8N7F7 174 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 RUNDC3BQ96NL0 473 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 MTMR4Q9NYA4 1195 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 PCYOX1Q9UHG3 505 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 DNAJC12Q9UKB3 198 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 DNM3Q9UQ16 869 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 STK38LQ9Y2H1 464 aa15.32■□□□□ 0.04
SRP54-202ENST00000546080 ARFGEF1Q9Y6D6 1849 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 ANKRD62A6NC57 917 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 MEIS1O00470 390 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 KIF3CO14782 793 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 KRT16P08779 473 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 SNHG28P0DPA3 235 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 LACTBP83111 547 aaPredicted RBP15.31■□□□□ 0.04
SRP54-202ENST00000546080 CCDC137Q6PK04 289 aaKnown RBP15.31■□□□□ 0.04
SRP54-202ENST00000546080 CATSPER3Q86XQ3 398 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 SLFN12Q8IYM2 578 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 KIF2BQ8N4N8 673 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 PRELID2Q8N945 189 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 SYT2Q8N9I0 419 aaPredicted RBP15.31■□□□□ 0.04
SRP54-202ENST00000546080 ERMNQ8TAM6 284 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 PLCD4Q9BRC7 762 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 ROPN1BQ9BZX4 212 aaPredicted RBP15.31■□□□□ 0.04
SRP54-202ENST00000546080 NYXQ9GZU5 481 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 ROPN1Q9HAT0 212 aaPredicted RBP15.31■□□□□ 0.04
SRP54-202ENST00000546080 ANKIB1Q9P2G1 1089 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 A8MUI8 341 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 MIF4GDA9UHW6 222 aaKnown RBP15.31■□□□□ 0.04
SRP54-202ENST00000546080 O00370 1275 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 CCNHP51946 323 aaPredicted RBP15.31■□□□□ 0.04
SRP54-202ENST00000546080 PSMC6P62333 389 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 BMT2Q1RMZ1 405 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 SEL1L2Q5TEA6 688 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms