RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 CXCL10P02778 98 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 PLS3P13797 630 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 DARSP14868 501 aaKnown RBP13□□□□□ -0.33
SNHG1-221ENST00000544983 GAP43P17677 238 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 PTMSP20962 102 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 ZNF131P52739 623 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 EFNA5P52803 228 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 FPGSQ05932 587 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 DRP2Q13474 957 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 GIT2Q14161 759 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 DHX8Q14562 1220 aaKnown RBP13□□□□□ -0.33
SNHG1-221ENST00000544983 KIZQ2M2Z5 673 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 LONRF3Q496Y0 759 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 TRAF7Q6Q0C0 670 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 TSHZ1Q6ZSZ6 1077 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 RNF149Q8NC42 400 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 ENGASEQ8NFI3 743 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 SPIRE2Q8WWL2 714 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 APBB2Q92870 758 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 KCNN1Q92952 543 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 REEP2Q9BRK0 252 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 TRIM9Q9C026 710 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 WNT8AQ9H1J5 351 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 GOLPH3LQ9H4A5 285 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 PARVGQ9HBI0 331 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 PVALEFA0A1B0GWK0 134 aa12.99□□□□□ -0.33
SNHG1-221ENST00000544983 MYMKA6NI61 221 aa12.99□□□□□ -0.33
SNHG1-221ENST00000544983 KINO60870 393 aaKnown RBP12.99□□□□□ -0.33
SNHG1-221ENST00000544983 EFCAB14O75071 495 aa12.99□□□□□ -0.33
SNHG1-221ENST00000544983 CTSHP09668 335 aa12.99□□□□□ -0.33
SNHG1-221ENST00000544983 MAPTP10636 758 aaKnown RBP12.99□□□□□ -0.33
SNHG1-221ENST00000544983 SFPQP23246 707 aaKnown RBP eCLIP12.99□□□□□ -0.33
SNHG1-221ENST00000544983 GLRA2P23416 452 aa12.99□□□□□ -0.33
SNHG1-221ENST00000544983 CCL23P55773 120 aa12.99□□□□□ -0.33
SNHG1-221ENST00000544983 PTENP60484 403 aa12.99□□□□□ -0.33
SNHG1-221ENST00000544983 NCBP1Q09161 790 aaKnown RBP12.99□□□□□ -0.33
SNHG1-221ENST00000544983 MAPK7Q13164 816 aa12.99□□□□□ -0.33
SNHG1-221ENST00000544983 SNW1Q13573 536 aaKnown RBP12.99□□□□□ -0.33
SNHG1-221ENST00000544983 FBXO47Q5MNV8 452 aa12.99□□□□□ -0.33
SNHG1-221ENST00000544983 CDCA2Q69YH5 1023 aaPredicted RBP12.99□□□□□ -0.33
SNHG1-221ENST00000544983 KRBA2Q6ZNG9 492 aa12.99□□□□□ -0.33
SNHG1-221ENST00000544983 MAEAQ7L5Y9 396 aa12.99□□□□□ -0.33
SNHG1-221ENST00000544983 ZBTB8OSQ8IWT0 167 aa12.99□□□□□ -0.33
SNHG1-221ENST00000544983 CCDC65Q8IXS2 484 aa12.99□□□□□ -0.33
SNHG1-221ENST00000544983 BADQ92934 168 aa12.99□□□□□ -0.33
SNHG1-221ENST00000544983 NLRP4Q96MN2 994 aa12.99□□□□□ -0.33
SNHG1-221ENST00000544983 FTHL17Q9BXU8 183 aa12.99□□□□□ -0.33
SNHG1-221ENST00000544983 IL23AQ9NPF7 189 aa12.99□□□□□ -0.33
SNHG1-221ENST00000544983 GPRC5CQ9NQ84 441 aa12.99□□□□□ -0.33
SNHG1-221ENST00000544983 SERTAD1Q9UHV2 236 aa12.99□□□□□ -0.33
SNHG1-221ENST00000544983 ZMYND8Q9ULU4 1186 aaPredicted RBP12.99□□□□□ -0.33
SNHG1-221ENST00000544983 TANC1Q9C0D5 1861 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 UMODL1Q5DID0 1318 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 A0A087WZ62 844 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 FRMD3A2A2Y4 597 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 LRRIQ4A6NIV6 560 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 GADD45BO75293 160 aaPredicted RBP12.98□□□□□ -0.33
SNHG1-221ENST00000544983 RPS6KA5O75582 802 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 SRGAP2CP0DJJ0 459 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 ACTN1P12814 892 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 CSF2RAP15509 400 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 ITGB8P26012 769 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 NPTX2P47972 431 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 TMEM62Q0P6H9 643 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 ALCAMQ13740 583 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 CAPSQ13938 189 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 PLEKHG4Q58EX7 1191 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 PSRC1Q6PGN9 363 aaPredicted RBP12.98□□□□□ -0.33
SNHG1-221ENST00000544983 DAW1Q8N136 415 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 DEPTORQ8TB45 409 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 ASAP3Q8TDY4 903 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 SEPT8Q92599 483 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 CCDC47Q96A33 483 aaKnown RBP12.98□□□□□ -0.33
SNHG1-221ENST00000544983 DNAJC19Q96DA6 116 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 PAGE5Q96GU1 130 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 PRIMPOLQ96LW4 560 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 FDXACB1Q9BRP7 624 aaPredicted RBP12.98□□□□□ -0.33
SNHG1-221ENST00000544983 IFIH1Q9BYX4 1025 aaKnown RBP12.98□□□□□ -0.33
SNHG1-221ENST00000544983 GTPBP4Q9BZE4 634 aaKnown RBP12.98□□□□□ -0.33
SNHG1-221ENST00000544983 IFT122Q9HBG6 1241 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 OLFML3Q9NRN5 406 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 LMBRD1Q9NUN5 540 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
SNHG1-221ENST00000544983 GINS2Q9Y248 185 aa12.98□□□□□ -0.33
SNHG1-221ENST00000544983 H0YGN5 161 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 GTPBP6O43824 516 aaPredicted RBP12.97□□□□□ -0.33
SNHG1-221ENST00000544983 NBNO60934 754 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 BAIAP3O94812 1187 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 SYN1P17600 705 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 AXLP30530 894 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 PEX3P56589 373 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 ASIC1P78348 528 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 RAD51AP2Q09MP3 1159 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 PAK2Q13177 524 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 LPIN1Q14693 890 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 MBTPS1Q14703 1052 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 FAM187BQ17R55 369 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 CNKSR3Q6P9H4 555 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 STXBP4Q6ZWJ1 553 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 UNC13DQ70J99 1090 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms