RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 FAM86B2P0C5J1 330 aa16.53■□□□□ 0.24
COPS7A-220ENST00000544725 DARSP14868 501 aaKnown RBP16.53■□□□□ 0.24
COPS7A-220ENST00000544725 SYNE3Q6ZMZ3 975 aa16.53■□□□□ 0.24
COPS7A-220ENST00000544725 DDX53Q86TM3 631 aaKnown RBP16.53■□□□□ 0.24
COPS7A-220ENST00000544725 MICU3Q86XE3 530 aa16.53■□□□□ 0.24
COPS7A-220ENST00000544725 LRRC71Q8N4P6 559 aa16.53■□□□□ 0.24
COPS7A-220ENST00000544725 LINC01465Q8N7H1 131 aa16.53■□□□□ 0.24
COPS7A-220ENST00000544725 ZNF713Q8N859 430 aaPredicted RBP16.53■□□□□ 0.24
COPS7A-220ENST00000544725 ZNF577Q9BSK1 485 aa16.53■□□□□ 0.24
COPS7A-220ENST00000544725 IGSF9Q9P2J2 1179 aa16.53■□□□□ 0.24
COPS7A-220ENST00000544725 PCDHA10Q9Y5I2 948 aa16.53■□□□□ 0.24
COPS7A-220ENST00000544725 STK25O00506 426 aa16.52■□□□□ 0.24
COPS7A-220ENST00000544725 GPC3P51654 580 aa16.52■□□□□ 0.24
COPS7A-220ENST00000544725 DGLUCYQ7Z3D6 616 aa16.52■□□□□ 0.24
COPS7A-220ENST00000544725 TMEM173Q86WV6 379 aaPredicted RBP16.52■□□□□ 0.24
COPS7A-220ENST00000544725 RMDN1Q96DB5 314 aa16.52■□□□□ 0.24
COPS7A-220ENST00000544725 IGSF21Q96ID5 467 aa16.52■□□□□ 0.24
COPS7A-220ENST00000544725 KCNK12Q9HB15 430 aa16.52■□□□□ 0.24
COPS7A-220ENST00000544725 RBM28Q9NW13 759 aaKnown RBP16.52■□□□□ 0.24
COPS7A-220ENST00000544725 GABBR1Q9UBS5 961 aa16.52■□□□□ 0.24
COPS7A-220ENST00000544725 CNTNAP5Q8WYK1 1306 aa16.51■□□□□ 0.23
COPS7A-220ENST00000544725 NCOR2Q9Y618 2525 aa16.51■□□□□ 0.23
COPS7A-220ENST00000544725 IGLV3-22A0A075B6J6 115 aa16.51■□□□□ 0.23
COPS7A-220ENST00000544725 RFX1P22670 979 aa16.51■□□□□ 0.23
COPS7A-220ENST00000544725 CLK2P49760 499 aaKnown RBP16.51■□□□□ 0.23
COPS7A-220ENST00000544725 SETQ01105 290 aaPredicted RBP16.51■□□□□ 0.23
COPS7A-220ENST00000544725 SGMS1Q86VZ5 419 aa16.51■□□□□ 0.23
COPS7A-220ENST00000544725 NLRP7Q8WX94 980 aa16.51■□□□□ 0.23
COPS7A-220ENST00000544725 ZNF668Q96K58 619 aaPredicted RBP16.51■□□□□ 0.23
COPS7A-220ENST00000544725 EMILIN2Q9BXX0 1053 aa16.51■□□□□ 0.23
COPS7A-220ENST00000544725 CHST12Q9NRB3 414 aa16.51■□□□□ 0.23
COPS7A-220ENST00000544725 NRBP2Q9NSY0 501 aa16.51■□□□□ 0.23
COPS7A-220ENST00000544725 BARHL2Q9NY43 387 aa16.51■□□□□ 0.23
COPS7A-220ENST00000544725 STK39Q9UEW8 545 aa16.51■□□□□ 0.23
COPS7A-220ENST00000544725 MED19A0JLT2 244 aaPredicted RBP16.5■□□□□ 0.23
COPS7A-220ENST00000544725 GALTP07902 379 aa16.5■□□□□ 0.23
COPS7A-220ENST00000544725 CYP3A4P08684 503 aa16.5■□□□□ 0.23
COPS7A-220ENST00000544725 SKIP12755 728 aa16.5■□□□□ 0.23
COPS7A-220ENST00000544725 FGFR4P22455 802 aa16.5■□□□□ 0.23
COPS7A-220ENST00000544725 PHKA2P46019 1235 aa16.5■□□□□ 0.23
COPS7A-220ENST00000544725 NONOQ15233 471 aaKnown RBP eCLIP16.5■□□□□ 0.23
COPS7A-220ENST00000544725 LETM2Q2VYF4 491 aa16.5■□□□□ 0.23
COPS7A-220ENST00000544725 GLB1LQ6UWU2 654 aa16.5■□□□□ 0.23
COPS7A-220ENST00000544725 C15orf39Q6ZRI6 1047 aa16.5■□□□□ 0.23
COPS7A-220ENST00000544725 LRRC2Q9BYS8 371 aa16.5■□□□□ 0.23
COPS7A-220ENST00000544725 WNT16Q9UBV4 365 aa16.5■□□□□ 0.23
COPS7A-220ENST00000544725 SAMM50Q9Y512 469 aa16.5■□□□□ 0.23
COPS7A-220ENST00000544725 V9GY48 417 aaPredicted RBP16.5■□□□□ 0.23
COPS7A-220ENST00000544725 OATP04181 439 aa16.49■□□□□ 0.23
COPS7A-220ENST00000544725 KLRC2P26717 231 aa16.49■□□□□ 0.23
COPS7A-220ENST00000544725 CDC42EP1Q00587 391 aa16.49■□□□□ 0.23
COPS7A-220ENST00000544725 RNASELQ05823 741 aaKnown RBP16.49■□□□□ 0.23
COPS7A-220ENST00000544725 DNAH14Q0VDD8 3507 aa16.49■□□□□ 0.23
COPS7A-220ENST00000544725 PTPN14Q15678 1187 aa16.49■□□□□ 0.23
COPS7A-220ENST00000544725 NOMO2Q5JPE7 1267 aa16.49■□□□□ 0.23
COPS7A-220ENST00000544725 JAKMIP3Q5VZ66 844 aa16.49■□□□□ 0.23
COPS7A-220ENST00000544725 KIAA2013Q8IYS2 634 aa16.49■□□□□ 0.23
COPS7A-220ENST00000544725 FEZF2Q8TBJ5 459 aa16.49■□□□□ 0.23
COPS7A-220ENST00000544725 TRAIPQ9BWF2 469 aa16.49■□□□□ 0.23
COPS7A-220ENST00000544725 GCOM2Q9BZD3 368 aaPredicted RBP16.49■□□□□ 0.23
COPS7A-220ENST00000544725 NRDE2Q9H7Z3 1164 aa16.49■□□□□ 0.23
COPS7A-220ENST00000544725 TBC1D13Q9NVG8 400 aa16.49■□□□□ 0.23
COPS7A-220ENST00000544725 EPG5Q9HCE0 2579 aa16.48■□□□□ 0.23
COPS7A-220ENST00000544725 DENND4AQ7Z401 1863 aa16.48■□□□□ 0.23
COPS7A-220ENST00000544725 WDR64B1ANS9 1081 aa16.48■□□□□ 0.23
COPS7A-220ENST00000544725 CFHP08603 1231 aa16.48■□□□□ 0.23
COPS7A-220ENST00000544725 CLCN4P51793 760 aa16.48■□□□□ 0.23
COPS7A-220ENST00000544725 TBC1D8BQ0IIM8 1120 aa16.48■□□□□ 0.23
COPS7A-220ENST00000544725 COL9A3Q14050 684 aaPredicted RBP16.48■□□□□ 0.23
COPS7A-220ENST00000544725 PUM1Q14671 1186 aaKnown RBP eCLIP16.48■□□□□ 0.23
COPS7A-220ENST00000544725 RTN1Q16799 776 aa16.48■□□□□ 0.23
COPS7A-220ENST00000544725 TWF2Q6IBS0 349 aaKnown RBP16.48■□□□□ 0.23
COPS7A-220ENST00000544725 ZC3H14Q6PJT7 736 aaKnown RBP16.48■□□□□ 0.23
COPS7A-220ENST00000544725 BCL7CQ8WUZ0 217 aaPredicted RBP16.48■□□□□ 0.23
COPS7A-220ENST00000544725 CRYGNQ8WXF5 182 aa16.48■□□□□ 0.23
COPS7A-220ENST00000544725 KLHL5Q96PQ7 755 aa16.48■□□□□ 0.23
COPS7A-220ENST00000544725 HINFPQ9BQA5 517 aa16.48■□□□□ 0.23
COPS7A-220ENST00000544725 INPP5FQ9Y2H2 1132 aa16.48■□□□□ 0.23
COPS7A-220ENST00000544725 R4GN57 208 aa16.48■□□□□ 0.23
COPS7A-220ENST00000544725 CEP250Q9BV73 2442 aa16.47■□□□□ 0.23
COPS7A-220ENST00000544725 SLC27A2O14975 620 aa16.47■□□□□ 0.23
COPS7A-220ENST00000544725 NARSO43776 548 aaKnown RBP16.47■□□□□ 0.23
COPS7A-220ENST00000544725 CSDE1O75534 798 aaKnown RBP16.47■□□□□ 0.23
COPS7A-220ENST00000544725 SFPQP23246 707 aaKnown RBP eCLIP16.47■□□□□ 0.23
COPS7A-220ENST00000544725 SLC11A1P49279 550 aa16.47■□□□□ 0.23
COPS7A-220ENST00000544725 PRKCEQ02156 737 aa16.47■□□□□ 0.23
COPS7A-220ENST00000544725 FUT2Q10981 343 aa16.47■□□□□ 0.23
COPS7A-220ENST00000544725 ELMSAN1Q6PJG2 1045 aa16.47■□□□□ 0.23
COPS7A-220ENST00000544725 APOA5Q6Q788 366 aa16.47■□□□□ 0.23
COPS7A-220ENST00000544725 CMASQ8NFW8 434 aaPredicted RBP16.47■□□□□ 0.23
COPS7A-220ENST00000544725 STAMQ92783 540 aa16.47■□□□□ 0.23
COPS7A-220ENST00000544725 LPPQ93052 612 aa16.47■□□□□ 0.23
COPS7A-220ENST00000544725 GBP3Q9H0R5 595 aa16.47■□□□□ 0.23
COPS7A-220ENST00000544725 MYH9P35579 1960 aaKnown RBP16.47■□□□□ 0.23
COPS7A-220ENST00000544725 CACNA1BQ00975 2339 aa16.47■□□□□ 0.23
COPS7A-220ENST00000544725 KRBA1A5PL33 1030 aa16.46■□□□□ 0.23
COPS7A-220ENST00000544725 ZNF862O60290 1169 aa16.46■□□□□ 0.23
COPS7A-220ENST00000544725 CNPP09543 421 aaKnown RBP16.46■□□□□ 0.23
COPS7A-220ENST00000544725 GBP2P32456 591 aaPredicted RBP16.46■□□□□ 0.23
COPS7A-220ENST00000544725 RAB27AP51159 221 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms