RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 TIGD5Q53EQ6 642 aa25.93■■□□□ 1.74
CHFR-222ENST00000544093 RILPL1Q5EBL4 403 aa25.93■■□□□ 1.74
CHFR-222ENST00000544093 PRPF31Q8WWY3 499 aaKnown RBP25.93■■□□□ 1.74
CHFR-222ENST00000544093 TRAIPQ9BWF2 469 aa25.93■■□□□ 1.74
CHFR-222ENST00000544093 MRPL42Q9Y6G3 142 aaKnown RBP25.93■■□□□ 1.74
CHFR-222ENST00000544093 CUL9Q8IWT3 2517 aa25.93■■□□□ 1.74
CHFR-222ENST00000544093 A0A0U1RQF3 1178 aa25.92■■□□□ 1.74
CHFR-222ENST00000544093 SKIP12755 728 aa25.92■■□□□ 1.74
CHFR-222ENST00000544093 RARRES1P49788 294 aa25.92■■□□□ 1.74
CHFR-222ENST00000544093 FXR2P51116 673 aaKnown RBP eCLIP25.92■■□□□ 1.74
CHFR-222ENST00000544093 MRPS5P82675 430 aaKnown RBP25.92■■□□□ 1.74
CHFR-222ENST00000544093 PCBP1Q15365 356 aaKnown RBP eCLIP25.92■■□□□ 1.74
CHFR-222ENST00000544093 TJAP1Q5JTD0 557 aa25.92■■□□□ 1.74
CHFR-222ENST00000544093 MCTP1Q6DN14 999 aa25.92■■□□□ 1.74
CHFR-222ENST00000544093 SRGAP1Q7Z6B7 1085 aa25.92■■□□□ 1.74
CHFR-222ENST00000544093 TMEM143Q96AN5 459 aa25.92■■□□□ 1.74
CHFR-222ENST00000544093 NACC1Q96RE7 527 aa25.92■■□□□ 1.74
CHFR-222ENST00000544093 AAASQ9NRG9 546 aa25.92■■□□□ 1.74
CHFR-222ENST00000544093 DLL1O00548 723 aa25.91■■□□□ 1.74
CHFR-222ENST00000544093 EOMESO95936 686 aa25.91■■□□□ 1.74
CHFR-222ENST00000544093 IBSPP21815 317 aaPredicted RBP25.91■■□□□ 1.74
CHFR-222ENST00000544093 RPA1P27694 616 aa25.91■■□□□ 1.74
CHFR-222ENST00000544093 LAMTOR4Q0VGL1 99 aa25.91■■□□□ 1.74
CHFR-222ENST00000544093 FERMT3Q86UX7 667 aa25.91■■□□□ 1.74
CHFR-222ENST00000544093 CATSPER3Q86XQ3 398 aa25.91■■□□□ 1.74
CHFR-222ENST00000544093 KSR1Q8IVT5 923 aa25.91■■□□□ 1.74
CHFR-222ENST00000544093 IFT122Q9HBG6 1241 aa25.91■■□□□ 1.74
CHFR-222ENST00000544093 DBR1Q9UK59 544 aaKnown RBP25.91■■□□□ 1.74
CHFR-222ENST00000544093 KIAA1671Q9BY89 1806 aa25.91■■□□□ 1.74
CHFR-222ENST00000544093 ZBTB39O15060 712 aa25.9■■□□□ 1.74
CHFR-222ENST00000544093 SPATA31C1P0DKV0 1188 aa25.9■■□□□ 1.74
CHFR-222ENST00000544093 POU5F1BQ06416 359 aa25.9■■□□□ 1.74
CHFR-222ENST00000544093 TFDP1Q14186 410 aa25.9■■□□□ 1.74
CHFR-222ENST00000544093 PDIA5Q14554 519 aa25.9■■□□□ 1.74
CHFR-222ENST00000544093 CSPP1Q1MSJ5 1256 aa25.9■■□□□ 1.74
CHFR-222ENST00000544093 PAN2Q504Q3 1202 aaKnown RBP25.9■■□□□ 1.74
CHFR-222ENST00000544093 CATSPER4Q7RTX7 472 aa25.9■■□□□ 1.74
CHFR-222ENST00000544093 ECHDC2Q86YB7 292 aa25.9■■□□□ 1.74
CHFR-222ENST00000544093 ABI1Q8IZP0 508 aa25.9■■□□□ 1.74
CHFR-222ENST00000544093 C4orf32Q8N8J7 132 aa25.9■■□□□ 1.74
CHFR-222ENST00000544093 TMEM117Q9H0C3 514 aa25.9■■□□□ 1.74
CHFR-222ENST00000544093 PRDM6Q9NQX0 595 aa25.9■■□□□ 1.74
CHFR-222ENST00000544093 TBKBP1A7MCY6 615 aa25.89■■□□□ 1.74
CHFR-222ENST00000544093 SRGAP2CP0DJJ0 459 aa25.89■■□□□ 1.74
CHFR-222ENST00000544093 FGFR4P22455 802 aa25.89■■□□□ 1.74
CHFR-222ENST00000544093 PRPHP41219 470 aa25.89■■□□□ 1.74
CHFR-222ENST00000544093 PHKA2P46019 1235 aa25.89■■□□□ 1.74
CHFR-222ENST00000544093 TOB1P50616 345 aaPredicted RBP25.89■■□□□ 1.74
CHFR-222ENST00000544093 PTGDRQ13258 359 aa25.89■■□□□ 1.74
CHFR-222ENST00000544093 HLA-CQ95604 372 aa25.89■■□□□ 1.74
CHFR-222ENST00000544093 ASB2Q96Q27 587 aa25.89■■□□□ 1.74
CHFR-222ENST00000544093 PIN4Q9Y237 131 aaKnown RBP25.89■■□□□ 1.74
CHFR-222ENST00000544093 CSDE1O75534 798 aaKnown RBP25.88■■□□□ 1.73
CHFR-222ENST00000544093 RAB27AP51159 221 aa25.88■■□□□ 1.73
CHFR-222ENST00000544093 FAM102BQ5T8I3 360 aa25.88■■□□□ 1.73
CHFR-222ENST00000544093 LARP1BQ659C4 914 aaKnown RBP25.88■■□□□ 1.73
CHFR-222ENST00000544093 TWF2Q6IBS0 349 aaKnown RBP25.88■■□□□ 1.73
CHFR-222ENST00000544093 RNF149Q8NC42 400 aa25.88■■□□□ 1.73
CHFR-222ENST00000544093 MCPH1Q8NEM0 835 aa25.88■■□□□ 1.73
CHFR-222ENST00000544093 PIGOQ8TEQ8 1089 aa25.88■■□□□ 1.73
CHFR-222ENST00000544093 XPNPEP1Q9NQW7 623 aa25.88■■□□□ 1.73
CHFR-222ENST00000544093 BMP2KQ9NSY1 1161 aaPredicted RBP25.88■■□□□ 1.73
CHFR-222ENST00000544093 AGPAT5Q9NUQ2 364 aa25.88■■□□□ 1.73
CHFR-222ENST00000544093 LRWD1Q9UFC0 647 aa25.88■■□□□ 1.73
CHFR-222ENST00000544093 PCDHB6Q9Y5E3 794 aa25.88■■□□□ 1.73
CHFR-222ENST00000544093 PCDHB12Q9Y5F1 795 aa25.88■■□□□ 1.73
CHFR-222ENST00000544093 MED24O75448 989 aa25.87■■□□□ 1.73
CHFR-222ENST00000544093 CUL4AQ13619 759 aa25.87■■□□□ 1.73
CHFR-222ENST00000544093 NBR1Q14596 966 aa25.87■■□□□ 1.73
CHFR-222ENST00000544093 SPOUT1Q5T280 376 aaKnown RBP25.87■■□□□ 1.73
CHFR-222ENST00000544093 NSUN3Q9H649 340 aaKnown RBP25.87■■□□□ 1.73
CHFR-222ENST00000544093 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.87■■□□□ 1.73
CHFR-222ENST00000544093 PLAGL2Q9UPG8 496 aa25.87■■□□□ 1.73
CHFR-222ENST00000544093 VCANP13611 3396 aa25.87■■□□□ 1.73
CHFR-222ENST00000544093 FGFR1P11362 822 aa25.86■■□□□ 1.73
CHFR-222ENST00000544093 PDCP20941 246 aa25.86■■□□□ 1.73
CHFR-222ENST00000544093 GATMP50440 423 aa25.86■■□□□ 1.73
CHFR-222ENST00000544093 NCBP1Q09161 790 aaKnown RBP25.86■■□□□ 1.73
CHFR-222ENST00000544093 ZNF598Q86UK7 904 aaKnown RBP25.86■■□□□ 1.73
CHFR-222ENST00000544093 LRRC43Q8N309 656 aa25.86■■□□□ 1.73
CHFR-222ENST00000544093 IGSF22Q8N9C0 903 aa25.86■■□□□ 1.73
CHFR-222ENST00000544093 MRPL9Q9BYD2 267 aaKnown RBP25.86■■□□□ 1.73
CHFR-222ENST00000544093 NFKBIZQ9BYH8 718 aa25.86■■□□□ 1.73
CHFR-222ENST00000544093 XIRP2A4UGR9 3374 aa25.86■■□□□ 1.73
CHFR-222ENST00000544093 NCK2O43639 380 aa25.85■■□□□ 1.73
CHFR-222ENST00000544093 LAG3P18627 525 aa25.85■■□□□ 1.73
CHFR-222ENST00000544093 ARL2P36404 184 aa25.85■■□□□ 1.73
CHFR-222ENST00000544093 PTENP60484 403 aa25.85■■□□□ 1.73
CHFR-222ENST00000544093 POTEGQ6S5H5 508 aa25.85■■□□□ 1.73
CHFR-222ENST00000544093 DTHD1Q6ZMT9 781 aa25.85■■□□□ 1.73
CHFR-222ENST00000544093 IFNLR1Q8IU57 520 aaPredicted RBP25.85■■□□□ 1.73
CHFR-222ENST00000544093 COL25A1Q9BXS0 654 aaPredicted RBP25.85■■□□□ 1.73
CHFR-222ENST00000544093 CARNS1A5YM72 827 aa25.84■■□□□ 1.73
CHFR-222ENST00000544093 GRM6O15303 877 aa25.84■■□□□ 1.73
CHFR-222ENST00000544093 USO1O60763 962 aaKnown RBP25.84■■□□□ 1.73
CHFR-222ENST00000544093 ZNF623O75123 536 aa25.84■■□□□ 1.73
CHFR-222ENST00000544093 ERLIN2O94905 339 aa25.84■■□□□ 1.73
CHFR-222ENST00000544093 AXLP30530 894 aa25.84■■□□□ 1.73
CHFR-222ENST00000544093 CCT6AP40227 531 aaKnown RBP25.84■■□□□ 1.73
CHFR-222ENST00000544093 UBE3AQ05086 875 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms