RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 CNOT8Q9UFF9 292 aaKnown RBP14.88□□□□□ -0.03
VPS33A-208ENST00000543633 ADAMTSL1Q8N6G6 1762 aa14.88□□□□□ -0.03
VPS33A-208ENST00000543633 ANKRD62A6NC57 917 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 SPDYE3A6NKU9 549 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 KIF22Q14807 665 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 ERMARDQ5T6L9 678 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 SLFN13Q68D06 897 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 NEK9Q8TD19 979 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 XPO6Q96QU8 1125 aaKnown RBP14.87□□□□□ -0.03
VPS33A-208ENST00000543633 RUSC1Q9BVN2 902 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 PABPC3Q9H361 631 aaKnown RBP14.87□□□□□ -0.03
VPS33A-208ENST00000543633 POLD4Q9HCU8 107 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 SLC40A1Q9NP59 571 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 DMAC2Q9NW81 257 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 CCDC169A6NNP5 214 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 MPHOSPH10O00566 681 aaKnown RBP14.87□□□□□ -0.03
VPS33A-208ENST00000543633 DNAJC8O75937 253 aaPredicted RBP14.87□□□□□ -0.03
VPS33A-208ENST00000543633 FAM13AO94988 1023 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 MMP10P09238 476 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 DRD4P21917 467 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 BAG6P46379 1132 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 TRAF1Q13077 416 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 GMCL1P1Q8NEA9 526 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 MORC4Q8TE76 937 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 CHMP6Q96FZ7 201 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 CCDC114Q96M63 670 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 EIF2AK1Q9BQI3 630 aaKnown RBP14.87□□□□□ -0.03
VPS33A-208ENST00000543633 STMN4Q9H169 189 aaPredicted RBP14.87□□□□□ -0.03
VPS33A-208ENST00000543633 BHMT2Q9H2M3 363 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 CCDC134Q9H6E4 229 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 BCCIPQ9P287 314 aaKnown RBP eCLIP14.87□□□□□ -0.03
VPS33A-208ENST00000543633 CNOT7Q9UIV1 285 aaKnown RBP14.87□□□□□ -0.03
VPS33A-208ENST00000543633 DNAJC12Q9UKB3 198 aa14.87□□□□□ -0.03
VPS33A-208ENST00000543633 RSPH10B2B2RC85 870 aa14.86□□□□□ -0.03
VPS33A-208ENST00000543633 PIK3CDO00329 1044 aa14.86□□□□□ -0.03
VPS33A-208ENST00000543633 MEIS1O00470 390 aa14.86□□□□□ -0.03
VPS33A-208ENST00000543633 RSPH10BP0C881 870 aa14.86□□□□□ -0.03
VPS33A-208ENST00000543633 CHRNA3P32297 505 aa14.86□□□□□ -0.03
VPS33A-208ENST00000543633 ZNF131P52739 623 aa14.86□□□□□ -0.03
VPS33A-208ENST00000543633 MAPK7Q13164 816 aa14.86□□□□□ -0.03
VPS33A-208ENST00000543633 DRAP1Q14919 205 aaPredicted RBP14.86□□□□□ -0.03
VPS33A-208ENST00000543633 DCAF12L1Q5VU92 463 aa14.86□□□□□ -0.03
VPS33A-208ENST00000543633 RINT1Q6NUQ1 792 aa14.86□□□□□ -0.03
VPS33A-208ENST00000543633 BTNL9Q6UXG8 535 aa14.86□□□□□ -0.03
VPS33A-208ENST00000543633 HS2ST1Q7LGA3 356 aa14.86□□□□□ -0.03
VPS33A-208ENST00000543633 FBXO11Q86XK2 927 aa14.86□□□□□ -0.03
VPS33A-208ENST00000543633 SLC9A9Q8IVB4 645 aa14.86□□□□□ -0.03
VPS33A-208ENST00000543633 GLYCTKQ8IVS8 523 aa14.86□□□□□ -0.03
VPS33A-208ENST00000543633 GMCL1Q96IK5 515 aa14.86□□□□□ -0.03
VPS33A-208ENST00000543633 CELF4Q9BZC1 486 aaKnown RBP14.86□□□□□ -0.03
VPS33A-208ENST00000543633 OSBPL7Q9BZF2 842 aa14.86□□□□□ -0.03
VPS33A-208ENST00000543633 INTS2Q9H0H0 1204 aaKnown RBP14.86□□□□□ -0.03
VPS33A-208ENST00000543633 DPH5Q9H2P9 285 aa14.86□□□□□ -0.03
VPS33A-208ENST00000543633 APEX2Q9UBZ4 518 aa14.86□□□□□ -0.03
VPS33A-208ENST00000543633 ODF2LQ9ULJ1 636 aa14.86□□□□□ -0.03
VPS33A-208ENST00000543633 C6orf229H3BNL8 230 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 MSH4O15457 936 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 PHF2O75151 1096 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 GSTA1P08263 222 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 TMOD1P28289 359 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 RDXP35241 583 aaKnown RBP14.85□□□□□ -0.03
VPS33A-208ENST00000543633 PMS2P54278 862 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 KLRC3Q07444 240 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 XRCC4Q13426 336 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 QPCTQ16769 361 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 KIAA1755Q5JYT7 1200 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 DENND2CQ68D51 928 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 CDC42EP5Q6NZY7 148 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 SP8Q8IXZ3 490 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 SGSM3Q96HU1 749 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 TRIM51Q9BSJ1 452 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 GPR88Q9GZN0 384 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 PARVGQ9HBI0 331 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 STK32BQ9NY57 414 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 PCYOX1Q9UHG3 505 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 SYNPO2Q9UMS6 1093 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 PCDHB13Q9Y5F0 798 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 FAM86B1E9PN63 330 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 PODXLO00592 558 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 ASAP2O43150 1006 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 AGTP01019 485 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 FAM86B2P0C5J1 330 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 EEF2P13639 858 aaKnown RBP14.85□□□□□ -0.03
VPS33A-208ENST00000543633 VCAM1P19320 739 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 TNFAIP3P21580 790 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 MMP13P45452 471 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 MYL7Q01449 175 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 ADCY2Q08462 1091 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 ITIH4Q14624 930 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 MSL1Q68DK7 614 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 GJB7Q6PEY0 223 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 C1orf186Q6ZWK4 172 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 CPLX4Q7Z7G2 160 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 JAMLQ86YT9 394 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 TMEM174Q8WUU8 243 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 TEKT1Q969V4 418 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 P2RX7Q99572 595 aaKnown RBP14.85□□□□□ -0.03
VPS33A-208ENST00000543633 EPB41L4BQ9H329 900 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 OSGEPQ9NPF4 335 aa14.85□□□□□ -0.03
VPS33A-208ENST00000543633 PPP1R9AQ9ULJ8 1098 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms