RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 CASP5P51878 434 aa11.82□□□□□ -0.52
NPIPB3-210ENST00000542817 NLRP11P59045 1033 aaKnown RBP11.82□□□□□ -0.52
NPIPB3-210ENST00000542817 PTENP60484 403 aa11.82□□□□□ -0.52
NPIPB3-210ENST00000542817 MRPS6P82932 125 aaKnown RBP11.82□□□□□ -0.52
NPIPB3-210ENST00000542817 CAMK4Q16566 473 aa11.82□□□□□ -0.52
NPIPB3-210ENST00000542817 AMHR2Q16671 573 aa11.82□□□□□ -0.52
NPIPB3-210ENST00000542817 KIZQ2M2Z5 673 aa11.82□□□□□ -0.52
NPIPB3-210ENST00000542817 TCTN1Q2MV58 587 aa11.82□□□□□ -0.52
NPIPB3-210ENST00000542817 UNC13DQ70J99 1090 aa11.82□□□□□ -0.52
NPIPB3-210ENST00000542817 RHPN2Q8IUC4 686 aa11.82□□□□□ -0.52
NPIPB3-210ENST00000542817 EXOC8Q8IYI6 725 aa11.82□□□□□ -0.52
NPIPB3-210ENST00000542817 TMEM161BQ8NDZ6 487 aa11.82□□□□□ -0.52
NPIPB3-210ENST00000542817 PSPC1Q8WXF1 523 aaKnown RBP11.82□□□□□ -0.52
NPIPB3-210ENST00000542817 PPP1R16BQ96T49 567 aa11.82□□□□□ -0.52
NPIPB3-210ENST00000542817 FDXACB1Q9BRP7 624 aaPredicted RBP11.82□□□□□ -0.52
NPIPB3-210ENST00000542817 CCDC113Q9H0I3 377 aa11.82□□□□□ -0.52
NPIPB3-210ENST00000542817 AGO3Q9H9G7 860 aaKnown RBP11.82□□□□□ -0.52
NPIPB3-210ENST00000542817 ARHGAP28Q9P2N2 729 aa11.82□□□□□ -0.52
NPIPB3-210ENST00000542817 PCDHA5Q9Y5H7 936 aa11.82□□□□□ -0.52
NPIPB3-210ENST00000542817 CDY2AQ9Y6F7 541 aa11.82□□□□□ -0.52
NPIPB3-210ENST00000542817 TET1Q8NFU7 2136 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 CHD9Q3L8U1 2897 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 PVALEFA0A1B0GWK0 134 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 DCDC2CA8MYV0 355 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 PITPNM1O00562 1244 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 KINO60870 393 aaKnown RBP11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 NBNO60934 754 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 CAND2O75155 1236 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 CSDE1O75534 798 aaKnown RBP11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 MBD3O95983 291 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 MYL1P05976 194 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 SRGAP2CP0DJJ0 459 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 CYP2C18P33260 490 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 NCKAP1LP55160 1127 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 PEX3P56589 373 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 AMPD3Q01432 767 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 POU5F1BQ06416 359 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 STK4Q13043 487 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 COASYQ13057 564 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 LPIN1Q14693 890 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 KLHL40Q2TBA0 621 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 KMT5BQ4FZB7 885 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 KANK3Q6NY19 840 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 EPM2AIP1Q7L775 607 aaPredicted RBP11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 SFR1Q86XK3 245 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 KIAA0895Q8NCT3 520 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 CAGE1Q8TC20 777 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 SPIRE2Q8WWL2 714 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 TCP11Q8WWU5 503 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 CCDC43Q96MW1 224 aaKnown RBP11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 NFKBIZQ9BYH8 718 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 CELF4Q9BZC1 486 aaKnown RBP11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 PARVGQ9HBI0 331 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 AKT3Q9Y243 479 aa11.81□□□□□ -0.52
NPIPB3-210ENST00000542817 TLR3O15455 904 aaKnown RBP11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 ASAP2O43150 1006 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 RHOBTB3O94955 611 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 TIMP1P01033 207 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 RPN1P04843 607 aaKnown RBP11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 CTSHP09668 335 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 MAPTP10636 758 aaKnown RBP11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 DARSP14868 501 aaKnown RBP11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 SELPP16109 830 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 TMOD1P28289 359 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 NMT1P30419 496 aaKnown RBP11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 NAMPTP43490 491 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 CRYBB1P53674 252 aaPredicted RBP11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 ASIC1P78348 528 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 MBTD1Q05BQ5 628 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 KCNA1Q09470 495 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 MXD4Q14582 209 aaPredicted RBP11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 FBXO47Q5MNV8 452 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 LRRC8DQ7L1W4 858 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 ZNF720Q7Z2F6 126 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 ZNF410Q86VK4 478 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 RNF149Q8NC42 400 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 SCLYQ96I15 445 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 DRC1Q96MC2 740 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 MAP7D2Q96T17 732 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 OSMRQ99650 979 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 IKZF4Q9H2S9 585 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 HIPK3Q9H422 1215 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 FZD8Q9H461 694 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 ST6GALNAC4Q9H4F1 302 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 C17orf75Q9HAS0 396 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 OLFML3Q9NRN5 406 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 TMEM39AQ9NV64 488 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 PANK4Q9NVE7 773 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 KIAA1468Q9P260 1216 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 NOD1Q9Y239 953 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 USP20Q9Y2K6 914 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 NOC2LQ9Y3T9 749 aaKnown RBP11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 TRPV2Q9Y5S1 764 aa11.8□□□□□ -0.52
NPIPB3-210ENST00000542817 CHD7Q9P2D1 2997 aa11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 PDE4DIPQ5VU43 2346 aa11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 SLC16A4O15374 487 aa11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 FAM13AO94988 1023 aa11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 CXCL10P02778 98 aa11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 KRT18P05783 430 aaKnown RBP11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 MYBP10242 640 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms