RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 PHC1P78364 1004 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 PRSS53Q2L4Q9 553 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 IZUMO3Q5VZ72 239 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 CREB3L3Q68CJ9 461 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 TTLL7Q6ZT98 887 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 IRF2BP1Q8IU81 584 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 CMIPQ8IY22 773 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.32□□□□□ -1.4
PRKDC-209ENST00000540819 MVB12AQ96EY5 273 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 DDX11Q96FC9 970 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 CERS4Q9HA82 394 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 DMRT3Q9NQL9 472 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 TOPORSQ9NS56 1045 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-209ENST00000540819 CDC23Q9UJX2 597 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 PADI4Q9UM07 663 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 DIS3Q9Y2L1 958 aaKnown RBP6.32□□□□□ -1.4
PRKDC-209ENST00000540819 COQ6Q9Y2Z9 468 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 TMX2Q9Y320 296 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 NOC2LQ9Y3T9 749 aaKnown RBP6.32□□□□□ -1.4
PRKDC-209ENST00000540819 ANKRD18BA2A2Z9 1011 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 AREL1O15033 823 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 DHX16O60231 1041 aaKnown RBP6.31□□□□□ -1.4
PRKDC-209ENST00000540819 MGEA5O60502 916 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 UBXN7O94888 489 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 DDX58O95786 925 aaKnown RBP6.31□□□□□ -1.4
PRKDC-209ENST00000540819 ZGLP1P0C6A0 271 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 LSP1P33241 339 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 ECI1P42126 302 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 PIK3CBP42338 1070 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 RAD52P43351 418 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 AUHQ13825 339 aaKnown RBP6.31□□□□□ -1.4
PRKDC-209ENST00000540819 FAM47CQ5HY64 1035 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 AGAP9Q5VTM2 703 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 PGBD2Q6P3X8 592 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 FASTKD5Q7L8L6 764 aaKnown RBP6.31□□□□□ -1.4
PRKDC-209ENST00000540819 OVCH1Q7RTY7 1134 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 ZNF605Q86T29 641 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 DTWD2Q8NBA8 298 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 BAHD1Q8TBE0 780 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-209ENST00000540819 CYB5D2Q8WUJ1 264 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 KIAA1191Q96A73 305 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 FERMT2Q96AC1 680 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 ORAI2Q96SN7 254 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 B3GNT5Q9BYG0 378 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 HELLSQ9NRZ9 838 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 H2AFY2Q9P0M6 372 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-209ENST00000540819 FBXO10Q9UK96 956 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 NUB1Q9Y5A7 615 aa6.31□□□□□ -1.4
PRKDC-209ENST00000540819 RHPN2P1A8MT19 583 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 CSTBP04080 98 aaKnown RBP6.3□□□□□ -1.4
PRKDC-209ENST00000540819 DHRS4L1P0CG22 281 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 ELF1P32519 619 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 TECP42680 631 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 CASP5P51878 434 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 ZBED6P86452 979 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 CHRNEQ04844 493 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 DUSP4Q13115 394 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 PAK1Q13153 545 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 SNX17Q15036 470 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 NR0B2Q15466 257 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 FKBP15Q5T1M5 1219 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 DENND5AQ6IQ26 1287 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 USP45Q70EL2 814 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 KREMEN2Q8NCW0 462 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 PCDH19Q8TAB3 1148 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 SLC30A5Q8TAD4 765 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 SYTL5Q8TDW5 730 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-209ENST00000540819 PANK1Q8TE04 598 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 PPP1R13LQ8WUF5 828 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 TRAPPC12Q8WVT3 735 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 LRTOMTQ8WZ04 291 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 LTV1Q96GA3 475 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-209ENST00000540819 NELL2Q99435 816 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 PHF20Q9BVI0 1012 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 TTLL2Q9BWV7 592 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 LSM14BQ9BX40 385 aaKnown RBP6.3□□□□□ -1.4
PRKDC-209ENST00000540819 AP1M1Q9BXS5 423 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 BTBD1Q9H0C5 482 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 KMT5AQ9NQR1 393 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 STARD7Q9NQZ5 370 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 ACAD8Q9UKU7 415 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 PCDHA11Q9Y5I1 949 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 FHOD1Q9Y613 1164 aa6.3□□□□□ -1.4
PRKDC-209ENST00000540819 CAPN8A6NHC0 703 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 ADAMTS3O15072 1205 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 GSTA4O15217 222 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 PLOD3O60568 738 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 PEX10O60683 326 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 GFPT2O94808 682 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 SRGAP2CP0DJJ0 459 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 TGFB3P10600 412 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 AGXTP21549 392 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 KRT9P35527 623 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 STT3AP46977 705 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 ZNF445P59923 1031 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 RNF4P78317 190 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 DLG4P78352 724 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 AMPD2Q01433 879 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 TAF12Q16514 161 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 ANO4Q32M45 955 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms