RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 FSD2A1L4K1 749 aa18.27■□□□□ 0.52
TRIM65-203ENST00000540812 TMEM221A6NGB7 291 aa18.27■□□□□ 0.52
TRIM65-203ENST00000540812 M0R296 226 aa18.27■□□□□ 0.52
TRIM65-203ENST00000540812 DEXIO95424 95 aa18.27■□□□□ 0.52
TRIM65-203ENST00000540812 PPM1AP35813 382 aa18.27■□□□□ 0.52
TRIM65-203ENST00000540812 NHLH1Q02575 133 aa18.27■□□□□ 0.52
TRIM65-203ENST00000540812 STK3Q13188 491 aa18.27■□□□□ 0.52
TRIM65-203ENST00000540812 XKR3Q5GH77 459 aa18.27■□□□□ 0.52
TRIM65-203ENST00000540812 TRIM67Q6ZTA4 783 aa18.27■□□□□ 0.52
TRIM65-203ENST00000540812 SLC39A11Q8N1S5 342 aa18.27■□□□□ 0.52
TRIM65-203ENST00000540812 DAGLBQ8NCG7 672 aa18.27■□□□□ 0.52
TRIM65-203ENST00000540812 ZNF274Q96GC6 653 aaPredicted RBP18.27■□□□□ 0.52
TRIM65-203ENST00000540812 GCOM2Q9BZD3 368 aaPredicted RBP18.27■□□□□ 0.52
TRIM65-203ENST00000540812 C22orf23Q9BZE7 217 aa18.27■□□□□ 0.52
TRIM65-203ENST00000540812 SPG21Q9NZD8 308 aa18.27■□□□□ 0.52
TRIM65-203ENST00000540812 CYP46A1Q9Y6A2 500 aa18.27■□□□□ 0.52
TRIM65-203ENST00000540812 ZDBF2Q9HCK1 2354 aa18.27■□□□□ 0.52
TRIM65-203ENST00000540812 A0A087WZ62 844 aa18.26■□□□□ 0.51
TRIM65-203ENST00000540812 NT5C1B-RDH14C9J2C7 533 aa18.26■□□□□ 0.51
TRIM65-203ENST00000540812 SLC37A4O43826 429 aa18.26■□□□□ 0.51
TRIM65-203ENST00000540812 EOMESO95936 686 aa18.26■□□□□ 0.51
TRIM65-203ENST00000540812 ZXDAP98168 799 aa18.26■□□□□ 0.51
TRIM65-203ENST00000540812 KRT17Q04695 432 aa18.26■□□□□ 0.51
TRIM65-203ENST00000540812 TMC7Q7Z402 723 aa18.26■□□□□ 0.51
TRIM65-203ENST00000540812 KSR1Q8IVT5 923 aa18.26■□□□□ 0.51
TRIM65-203ENST00000540812 FDXACB1Q9BRP7 624 aaPredicted RBP18.26■□□□□ 0.51
TRIM65-203ENST00000540812 DACT1Q9NYF0 836 aa18.26■□□□□ 0.51
TRIM65-203ENST00000540812 SUCLA2Q9P2R7 463 aaPredicted RBP18.26■□□□□ 0.51
TRIM65-203ENST00000540812 CDH22Q9UJ99 828 aa18.26■□□□□ 0.51
TRIM65-203ENST00000540812 DDX11L8A8MPP1 907 aa18.25■□□□□ 0.51
TRIM65-203ENST00000540812 EML1O00423 815 aa18.25■□□□□ 0.51
TRIM65-203ENST00000540812 CPLX1O14810 134 aa18.25■□□□□ 0.51
TRIM65-203ENST00000540812 SRGAP2BP0DMP2 458 aa18.25■□□□□ 0.51
TRIM65-203ENST00000540812 INF2Q27J81 1249 aa18.25■□□□□ 0.51
TRIM65-203ENST00000540812 PLA2G4FQ68DD2 849 aa18.25■□□□□ 0.51
TRIM65-203ENST00000540812 ANO5Q75V66 913 aa18.25■□□□□ 0.51
TRIM65-203ENST00000540812 LPPQ93052 612 aa18.25■□□□□ 0.51
TRIM65-203ENST00000540812 KCNH6Q9H252 994 aa18.25■□□□□ 0.51
TRIM65-203ENST00000540812 DDX25Q9UHL0 483 aaKnown RBP18.25■□□□□ 0.51
TRIM65-203ENST00000540812 KCNJ14Q9UNX9 436 aa18.25■□□□□ 0.51
TRIM65-203ENST00000540812 C2orf71A6NGG8 1288 aa18.24■□□□□ 0.51
TRIM65-203ENST00000540812 MEIS3P2A8K0S8 358 aa18.24■□□□□ 0.51
TRIM65-203ENST00000540812 DTNBO60941 627 aa18.24■□□□□ 0.51
TRIM65-203ENST00000540812 MAFO75444 373 aaPredicted RBP18.24■□□□□ 0.51
TRIM65-203ENST00000540812 SP100P23497 879 aaPredicted RBP18.24■□□□□ 0.51
TRIM65-203ENST00000540812 PHKA2P46019 1235 aa18.24■□□□□ 0.51
TRIM65-203ENST00000540812 BCAR1P56945 870 aa18.24■□□□□ 0.51
TRIM65-203ENST00000540812 SMC1AQ14683 1233 aaKnown RBP18.24■□□□□ 0.51
TRIM65-203ENST00000540812 NONOQ15233 471 aaKnown RBP eCLIP18.24■□□□□ 0.512e-8■■■■□ 21
TRIM65-203ENST00000540812 LONRF3Q496Y0 759 aa18.24■□□□□ 0.51
TRIM65-203ENST00000540812 TWF2Q6IBS0 349 aaKnown RBP18.24■□□□□ 0.51
TRIM65-203ENST00000540812 MOXD1Q6UVY6 613 aa18.24■□□□□ 0.51
TRIM65-203ENST00000540812 BMP8AQ7Z5Y6 402 aa18.24■□□□□ 0.51
TRIM65-203ENST00000540812 TMEM173Q86WV6 379 aaPredicted RBP18.24■□□□□ 0.51
TRIM65-203ENST00000540812 RHPN2Q8IUC4 686 aa18.24■□□□□ 0.51
TRIM65-203ENST00000540812 MRPL43Q8N983 215 aaKnown RBP18.24■□□□□ 0.51
TRIM65-203ENST00000540812 TM6SF1Q9BZW5 370 aa18.24■□□□□ 0.51
TRIM65-203ENST00000540812 CHST12Q9NRB3 414 aa18.24■□□□□ 0.51
TRIM65-203ENST00000540812 VAV3Q9UKW4 847 aa18.24■□□□□ 0.51
TRIM65-203ENST00000540812 SFPQP23246 707 aaKnown RBP eCLIP18.23■□□□□ 0.51
TRIM65-203ENST00000540812 MRE11P49959 708 aa18.23■□□□□ 0.51
TRIM65-203ENST00000540812 DNM2P50570 870 aa18.23■□□□□ 0.51
TRIM65-203ENST00000540812 PSMC5P62195 406 aa18.23■□□□□ 0.51
TRIM65-203ENST00000540812 CDC42EP1Q00587 391 aa18.23■□□□□ 0.51
TRIM65-203ENST00000540812 LETM2Q2VYF4 491 aa18.23■□□□□ 0.51
TRIM65-203ENST00000540812 IER5LQ5T953 404 aa18.23■□□□□ 0.51
TRIM65-203ENST00000540812 GALNT17Q6IS24 598 aa18.23■□□□□ 0.51
TRIM65-203ENST00000540812 ZNF410Q86VK4 478 aa18.23■□□□□ 0.51
TRIM65-203ENST00000540812 ZNF579Q8NAF0 562 aaKnown RBP18.23■□□□□ 0.51
TRIM65-203ENST00000540812 PBXIP1Q96AQ6 731 aa18.23■□□□□ 0.51
TRIM65-203ENST00000540812 MRPL9Q9BYD2 267 aaKnown RBP18.23■□□□□ 0.51
TRIM65-203ENST00000540812 PIN4Q9Y237 131 aaKnown RBP18.23■□□□□ 0.51
TRIM65-203ENST00000540812 HCFC2Q9Y5Z7 792 aa18.23■□□□□ 0.51
TRIM65-203ENST00000540812 EPB41L2O43491 1005 aaKnown RBP18.22■□□□□ 0.51
TRIM65-203ENST00000540812 CLASP2O75122 1294 aaKnown RBP18.22■□□□□ 0.51
TRIM65-203ENST00000540812 HOXB8P17481 243 aaPredicted RBP18.22■□□□□ 0.51
TRIM65-203ENST00000540812 NPEPPSP55786 919 aa18.22■□□□□ 0.51
TRIM65-203ENST00000540812 KRT25Q7Z3Z0 450 aa18.22■□□□□ 0.51
TRIM65-203ENST00000540812 PRSS33Q8NF86 280 aa18.22■□□□□ 0.51
TRIM65-203ENST00000540812 AUTS2Q8WXX7 1259 aa18.22■□□□□ 0.51
TRIM65-203ENST00000540812 CASP10Q92851 521 aa18.22■□□□□ 0.51
TRIM65-203ENST00000540812 NLRP4Q96MN2 994 aa18.22■□□□□ 0.51
TRIM65-203ENST00000540812 TRAIPQ9BWF2 469 aa18.22■□□□□ 0.51
TRIM65-203ENST00000540812 KCNMB3Q9NPA1 279 aa18.22■□□□□ 0.51
TRIM65-203ENST00000540812 PDRG1Q9NUG6 133 aa18.22■□□□□ 0.51
TRIM65-203ENST00000540812 FAM105AQ9NUU6 356 aa18.22■□□□□ 0.51
TRIM65-203ENST00000540812 WRAP73Q9P2S5 460 aaPredicted RBP18.22■□□□□ 0.51
TRIM65-203ENST00000540812 ZC3H11AO75152 810 aaKnown RBP eCLIP18.21■□□□□ 0.51
TRIM65-203ENST00000540812 CXCL14O95715 111 aa18.21■□□□□ 0.51
TRIM65-203ENST00000540812 CA8P35219 290 aa18.21■□□□□ 0.51
TRIM65-203ENST00000540812 ALDH7A1P49419 539 aaKnown RBP18.21■□□□□ 0.51
TRIM65-203ENST00000540812 SIGLEC14Q08ET2 396 aa18.21■□□□□ 0.51
TRIM65-203ENST00000540812 SCRN1Q12765 414 aa18.21■□□□□ 0.51
TRIM65-203ENST00000540812 PPP2R5CQ13362 524 aa18.21■□□□□ 0.51
TRIM65-203ENST00000540812 CPLX2Q6PUV4 134 aaKnown RBP18.21■□□□□ 0.51
TRIM65-203ENST00000540812 CATSPER4Q7RTX7 472 aa18.21■□□□□ 0.51
TRIM65-203ENST00000540812 FAM177A1Q8N128 213 aaPredicted RBP18.21■□□□□ 0.51
TRIM65-203ENST00000540812 VPS52Q8N1B4 723 aa18.21■□□□□ 0.51
TRIM65-203ENST00000540812 BCL7CQ8WUZ0 217 aaPredicted RBP18.21■□□□□ 0.51
TRIM65-203ENST00000540812 TMEM169Q96HH4 297 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms