RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 TMEM169Q96HH4 297 aa17.15■□□□□ 0.34
UBE3B-211ENST00000539843 MSLNLQ96KJ4 702 aa17.15■□□□□ 0.34
UBE3B-211ENST00000539843 NLRP4Q96MN2 994 aa17.15■□□□□ 0.34
UBE3B-211ENST00000539843 CASD1Q96PB1 797 aa17.15■□□□□ 0.34
UBE3B-211ENST00000539843 CWH43Q9H720 699 aa17.15■□□□□ 0.34
UBE3B-211ENST00000539843 BARX2Q9UMQ3 279 aaPredicted RBP17.15■□□□□ 0.34
UBE3B-211ENST00000539843 KCNJ14Q9UNX9 436 aa17.15■□□□□ 0.34
UBE3B-211ENST00000539843 PIN4Q9Y237 131 aaKnown RBP17.15■□□□□ 0.34
UBE3B-211ENST00000539843 LOXHD1Q8IVV2 1947 aa17.15■□□□□ 0.34
UBE3B-211ENST00000539843 MYO7AQ13402 2215 aa17.15■□□□□ 0.34
UBE3B-211ENST00000539843 EVPLQ92817 2033 aa17.14■□□□□ 0.34
UBE3B-211ENST00000539843 M0R2N6 131 aa17.14■□□□□ 0.33
UBE3B-211ENST00000539843 PER2O15055 1255 aa17.14■□□□□ 0.33
UBE3B-211ENST00000539843 TBX3O15119 743 aa17.14■□□□□ 0.33
UBE3B-211ENST00000539843 MAFO75444 373 aaPredicted RBP17.14■□□□□ 0.33
UBE3B-211ENST00000539843 P4HBP07237 508 aaKnown RBP17.14■□□□□ 0.33
UBE3B-211ENST00000539843 SCRN1Q12765 414 aa17.14■□□□□ 0.33
UBE3B-211ENST00000539843 PPP2R5CQ13362 524 aa17.14■□□□□ 0.33
UBE3B-211ENST00000539843 GLB1LQ6UWU2 654 aa17.14■□□□□ 0.33
UBE3B-211ENST00000539843 PGBD4Q96DM1 585 aa17.14■□□□□ 0.33
UBE3B-211ENST00000539843 CCDC43Q96MW1 224 aaKnown RBP17.14■□□□□ 0.33
UBE3B-211ENST00000539843 AIFM3Q96NN9 605 aa17.14■□□□□ 0.33
UBE3B-211ENST00000539843 PHF20Q9BVI0 1012 aa17.14■□□□□ 0.33
UBE3B-211ENST00000539843 C11orf16Q9NQ32 467 aa17.14■□□□□ 0.33
UBE3B-211ENST00000539843 CLEC1BQ9P126 229 aa17.14■□□□□ 0.33
UBE3B-211ENST00000539843 REV3LO60673 3130 aa17.14■□□□□ 0.33
UBE3B-211ENST00000539843 KIAA1671Q9BY89 1806 aa17.13■□□□□ 0.33
UBE3B-211ENST00000539843 A0A087WZ62 844 aa17.13■□□□□ 0.33
UBE3B-211ENST00000539843 FSCN2O14926 492 aa17.13■□□□□ 0.33
UBE3B-211ENST00000539843 GAS2O43903 313 aaKnown RBP17.13■□□□□ 0.33
UBE3B-211ENST00000539843 PFKFB2O60825 505 aa17.13■□□□□ 0.33
UBE3B-211ENST00000539843 RFC5P40937 340 aa17.13■□□□□ 0.33
UBE3B-211ENST00000539843 ERVFC1P60507 584 aa17.13■□□□□ 0.33
UBE3B-211ENST00000539843 RNASELQ05823 741 aaKnown RBP17.13■□□□□ 0.33
UBE3B-211ENST00000539843 SMC1AQ14683 1233 aaKnown RBP17.13■□□□□ 0.33
UBE3B-211ENST00000539843 B3GNT9Q6UX72 402 aa17.13■□□□□ 0.33
UBE3B-211ENST00000539843 PIK3AP1Q6ZUJ8 805 aa17.13■□□□□ 0.33
UBE3B-211ENST00000539843 HELQQ8TDG4 1101 aa17.13■□□□□ 0.33
UBE3B-211ENST00000539843 TCP11Q8WWU5 503 aa17.13■□□□□ 0.33
UBE3B-211ENST00000539843 CEP170P1Q96L14 293 aa17.13■□□□□ 0.33
UBE3B-211ENST00000539843 MFSD14AQ96MC6 490 aa17.13■□□□□ 0.33
UBE3B-211ENST00000539843 FDXACB1Q9BRP7 624 aaPredicted RBP17.13■□□□□ 0.33
UBE3B-211ENST00000539843 PHF7Q9BWX1 381 aaPredicted RBP17.13■□□□□ 0.33
UBE3B-211ENST00000539843 CYP26B1Q9NR63 512 aa17.13■□□□□ 0.33
UBE3B-211ENST00000539843 ORC3Q9UBD5 711 aaPredicted RBP17.13■□□□□ 0.33
UBE3B-211ENST00000539843 USP15Q9Y4E8 981 aaPredicted RBP17.13■□□□□ 0.33
UBE3B-211ENST00000539843 IGKV6-21A0A0C4DH24 114 aa17.12■□□□□ 0.33
UBE3B-211ENST00000539843 SLC37A4O43826 429 aa17.12■□□□□ 0.33
UBE3B-211ENST00000539843 EDIL3O43854 480 aa17.12■□□□□ 0.33
UBE3B-211ENST00000539843 HOXB8P17481 243 aaPredicted RBP17.12■□□□□ 0.33
UBE3B-211ENST00000539843 ATF7P17544 494 aaPredicted RBP17.12■□□□□ 0.33
UBE3B-211ENST00000539843 FGFR4P22455 802 aa17.12■□□□□ 0.33
UBE3B-211ENST00000539843 KRT2P35908 639 aa17.12■□□□□ 0.33
UBE3B-211ENST00000539843 PHKA2P46019 1235 aa17.12■□□□□ 0.33
UBE3B-211ENST00000539843 TRIM29Q14134 588 aa17.12■□□□□ 0.33
UBE3B-211ENST00000539843 TPRNQ4KMQ1 711 aa17.12■□□□□ 0.33
UBE3B-211ENST00000539843 HERC4Q5GLZ8 1057 aaPredicted RBP17.12■□□□□ 0.33
UBE3B-211ENST00000539843 RNF135Q8IUD6 432 aa17.12■□□□□ 0.33
UBE3B-211ENST00000539843 URGCPQ8TCY9 931 aa17.12■□□□□ 0.33
UBE3B-211ENST00000539843 PSPC1Q8WXF1 523 aaKnown RBP17.12■□□□□ 0.33
UBE3B-211ENST00000539843 CASP10Q92851 521 aa17.12■□□□□ 0.33
UBE3B-211ENST00000539843 TRAIPQ9BWF2 469 aa17.12■□□□□ 0.33
UBE3B-211ENST00000539843 KCNMB3Q9NPA1 279 aa17.12■□□□□ 0.33
UBE3B-211ENST00000539843 HCSTQ9UBK5 93 aa17.12■□□□□ 0.33
UBE3B-211ENST00000539843 STK39Q9UEW8 545 aa17.12■□□□□ 0.33
UBE3B-211ENST00000539843 MUTYHQ9UIF7 546 aa17.12■□□□□ 0.33
UBE3B-211ENST00000539843 PCDHGC5Q9Y5F6 944 aa17.12■□□□□ 0.33
UBE3B-211ENST00000539843 COL4A3BPQ9Y5P4 624 aa17.12■□□□□ 0.33
UBE3B-211ENST00000539843 GLP2RO95838 553 aa17.11■□□□□ 0.33
UBE3B-211ENST00000539843 TECP42680 631 aa17.11■□□□□ 0.33
UBE3B-211ENST00000539843 NCBP1Q09161 790 aaKnown RBP17.11■□□□□ 0.33
UBE3B-211ENST00000539843 DRP2Q13474 957 aa17.11■□□□□ 0.33
UBE3B-211ENST00000539843 GIT2Q14161 759 aa17.11■□□□□ 0.33
UBE3B-211ENST00000539843 EPHA7Q15375 998 aa17.11■□□□□ 0.33
UBE3B-211ENST00000539843 NPY5RQ15761 445 aa17.11■□□□□ 0.33
UBE3B-211ENST00000539843 CLLU1OSQ5K130 101 aa17.11■□□□□ 0.33
UBE3B-211ENST00000539843 PLA2G4FQ68DD2 849 aa17.11■□□□□ 0.33
UBE3B-211ENST00000539843 NCAPH2Q6IBW4 605 aa17.11■□□□□ 0.33
UBE3B-211ENST00000539843 ANO5Q75V66 913 aa17.11■□□□□ 0.33
UBE3B-211ENST00000539843 SH2D3AQ9BRG2 576 aa17.11■□□□□ 0.33
UBE3B-211ENST00000539843 LXNQ9BS40 222 aa17.11■□□□□ 0.33
UBE3B-211ENST00000539843 KCNH6Q9H252 994 aa17.11■□□□□ 0.33
UBE3B-211ENST00000539843 FAM105AQ9NUU6 356 aa17.11■□□□□ 0.33
UBE3B-211ENST00000539843 FNDC1Q4ZHG4 1894 aaPredicted RBP17.1■□□□□ 0.33
UBE3B-211ENST00000539843 TMEM150BA6NC51 233 aa17.1■□□□□ 0.33
UBE3B-211ENST00000539843 ASAP2O43150 1006 aa17.1■□□□□ 0.33
UBE3B-211ENST00000539843 ZC3H11AO75152 810 aaKnown RBP eCLIP17.1■□□□□ 0.33
UBE3B-211ENST00000539843 CSDE1O75534 798 aaKnown RBP17.1■□□□□ 0.33
UBE3B-211ENST00000539843 YWHABP31946 246 aaKnown RBP17.1■□□□□ 0.33
UBE3B-211ENST00000539843 CES5AQ6NT32 575 aa17.1■□□□□ 0.33
UBE3B-211ENST00000539843 LLGL2Q6P1M3 1020 aa17.1■□□□□ 0.33
UBE3B-211ENST00000539843 TMEM184AQ6ZMB5 413 aa17.1■□□□□ 0.33
UBE3B-211ENST00000539843 LRRC55Q6ZSA7 311 aa17.1■□□□□ 0.33
UBE3B-211ENST00000539843 SRGAP1Q7Z6B7 1085 aa17.1■□□□□ 0.33
UBE3B-211ENST00000539843 ZNF598Q86UK7 904 aaKnown RBP17.1■□□□□ 0.33
UBE3B-211ENST00000539843 C4orf19Q8IY42 314 aa17.1■□□□□ 0.33
UBE3B-211ENST00000539843 SLC39A11Q8N1S5 342 aa17.1■□□□□ 0.33
UBE3B-211ENST00000539843 RPGRIP1Q96KN7 1286 aa17.1■□□□□ 0.33
UBE3B-211ENST00000539843 ZSWIM4Q9H7M6 989 aa17.1■□□□□ 0.33
UBE3B-211ENST00000539843 RNF19AQ9NV58 838 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms