RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 USP8P40818 1118 aa13.65□□□□□ -0.22
SFSWAP-208ENST00000539506 IFNAR2P48551 515 aa13.65□□□□□ -0.22
SFSWAP-208ENST00000539506 ZNF211Q13398 564 aaPredicted RBP13.65□□□□□ -0.22
SFSWAP-208ENST00000539506 USP38Q8NB14 1042 aa13.65□□□□□ -0.22
SFSWAP-208ENST00000539506 RAPGEF5Q92565 580 aa13.65□□□□□ -0.22
SFSWAP-208ENST00000539506 SPAG5Q96R06 1193 aa13.65□□□□□ -0.22
SFSWAP-208ENST00000539506 SELENOSQ9BQE4 189 aa13.65□□□□□ -0.22
SFSWAP-208ENST00000539506 BAIAP2L1Q9UHR4 511 aa13.65□□□□□ -0.22
SFSWAP-208ENST00000539506 CLRN2A0PK11 232 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 GMNCA6NCL1 334 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 FOXO6A8MYZ6 492 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 KRIT1O00522 736 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 FAM107AO95990 144 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 CCDC172P0C7W6 258 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 IFFO1Q0D2I5 559 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 AADACL2Q6P093 401 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 TMBIM4Q9HC24 238 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 GCNT4Q9P109 453 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 DDX3XO00571 662 aaKnown RBP eCLIP13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 ENTPD3O75355 529 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 APBA3O96018 575 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 ARP10275 920 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 STAT2P52630 851 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 ALKBH5Q6P6C2 394 aaKnown RBP13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 FAM228AQ86W67 206 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 MTFR1LQ9H019 292 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 TAF1DQ9H5J8 278 aaPredicted RBP13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.64□□□□□ -0.231e-6■■■■■ 34
SFSWAP-208ENST00000539506 MLXIPLQ9NP71 852 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 OLFML3Q9NRN5 406 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 TSKSQ9UJT2 592 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 TMEM59LQ9UK28 342 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 PNMA2Q9UL42 364 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 FSBPO95073 299 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 TNFRSF8P28908 595 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 FAM133BQ5BKY9 247 aaKnown RBP13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 MICALCLQ6ZW33 695 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 MYCT1Q8N699 235 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 METTL13Q8N6R0 699 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 BANK1Q8NDB2 785 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 SEC16BQ96JE7 1060 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 GLIS2Q9BZE0 524 aaPredicted RBP13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 VCPKMTQ9H867 229 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 SLC24A3Q9HC58 644 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 SEPT11Q9NVA2 429 aaKnown RBP13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 ODF2LQ9ULJ1 636 aa13.64□□□□□ -0.23
SFSWAP-208ENST00000539506 H0YIN7 160 aa13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 TBCAO75347 108 aaKnown RBP13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 SHBGP04278 402 aa13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 PRKCIP41743 596 aa13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 GSCP56915 257 aaPredicted RBP13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 ZYXQ15942 572 aaKnown RBP13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 CCDC38Q502W7 563 aa13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 LRCH2Q5VUJ6 765 aa13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 PNMA8AQ86V59 439 aaPredicted RBP13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 TCP11Q8WWU5 503 aa13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 RUBCNQ92622 972 aa13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 GLG1Q92896 1179 aa13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 SLC5A5Q92911 643 aa13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 RBBP6Q7Z6E9 1792 aaKnown RBP13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 BTNL10A8MVZ5 291 aa13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 MYCNP04198 464 aaPredicted RBP13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 ECHS1P30084 290 aa13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 CBWD6Q4V339 395 aa13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 CBWD3Q5JTY5 395 aa13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 CBWD5Q5RIA9 395 aa13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 GPR88Q9GZN0 384 aa13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 OSGEPQ9NPF4 335 aa13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 FBXO28Q9NVF7 368 aa13.63□□□□□ -0.23
SFSWAP-208ENST00000539506 SLC16A3O15427 465 aaKnown RBP13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 GFPT2O94808 682 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 CLTAP09496 248 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 TNNC1P63316 161 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 ADCY1Q08828 1119 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 PPP2R5CQ13362 524 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 ACCSLQ4AC99 568 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 CYB5D1Q6P9G0 228 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 LNX1Q8TBB1 728 aaPredicted RBP13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 UNC45AQ9H3U1 944 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 TPX2Q9ULW0 747 aaKnown RBP13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 TMX2Q9Y320 296 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 PLSCR1O15162 318 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 LRRN2O75325 713 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 PPP1R7Q15435 360 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 GLE1Q53GS7 698 aaKnown RBP13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 CC2D2BQ6DHV5 1058 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 STYK1Q6J9G0 422 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 HIBCHQ6NVY1 386 aaPredicted RBP13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 ZNF720Q7Z2F6 126 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 DAAM2Q86T65 1068 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 MGARPQ8TDB4 240 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 RNF14Q9UBS8 474 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 NOC2LQ9Y3T9 749 aaKnown RBP13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 L3MBTL1Q9Y468 752 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 CAND2O75155 1236 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 UPP2O95045 317 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 KIF4AO95239 1232 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 NF2P35240 595 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 PARP9Q8IXQ6 854 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 TPCN2Q8NHX9 752 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms