RNA–Protein interactions for RNA: ENST00000538966.5

PLXNB3-209, Transcript of plexin B3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PLXNB3, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-209ENST00000538966 C16orf87Q6PH81 154 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 TGS1Q96RS0 853 aaKnown RBP15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 SLC13A1Q9BZW2 595 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 DHX36Q9H2U1 1008 aaKnown RBP15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 ANKARQ7Z5J8 1434 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 ZRANB2O95218 330 aaKnown RBP eCLIP15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 SURF1Q15526 300 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 SNX19Q92543 992 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 ZNF668Q96K58 619 aaPredicted RBP15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 ZBTB18Q99592 522 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 FSD1LQ9BXM9 530 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 EDEM3Q9BZQ6 932 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 LMCD1Q9NZU5 365 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 DIAPH2O60879 1101 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 ABCD1P33897 745 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 GNL1P36915 607 aaPredicted RBP15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 COPS2P61201 443 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 POU5F1BQ06416 359 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 RASSF3Q86WH2 238 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 CCNYL1Q8N7R7 359 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 PPM1NQ8N819 430 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 STRBPQ96SI9 672 aaKnown RBP15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 SH3GLB2Q9NR46 395 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 USP17L15C9J2P7 530 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 USP17L13C9JLJ4 530 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 USP17L11C9JVI0 530 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 USP17L18D6R9N7 530 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 USP17L22D6RA61 530 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 USP17L17D6RBQ6 530 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 USP17L19D6RCP7 530 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 USP17L20D6RJB6 530 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 TEX33O43247 280 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 SNX2O60749 519 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 PPP2R2AP63151 447 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 USP17L24Q0WX57 530 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 USP17L6PQ6QN14 398 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 ACAD11Q709F0 780 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 ZNF564Q8TBZ8 553 aaPredicted RBP15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 CYP4F11Q9HBI6 524 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 SARS2Q9NP81 518 aaKnown RBP15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 ANP32DO95626 131 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 ALCAMQ13740 583 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 FAM83BQ5T0W9 1011 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 SLFN12LQ6IEE8 588 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 DHX40Q8IX18 779 aaKnown RBP15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 RBM41Q96IZ5 413 aaKnown RBP15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 ATG3Q9NT62 314 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 CDK12Q9NYV4 1490 aaPredicted RBP15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 GMNCA6NCL1 334 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 SYCE1LA8MT33 242 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 MYL3P08590 195 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 STAT3P40763 770 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 FAM161BQ96MY7 647 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 PP2D1A8MPX8 630 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 ESRRBO95718 433 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 GH2P01242 217 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 MMS22LQ6ZRQ5 1243 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 ARHGEF25Q86VW2 580 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 NLRP14Q86W24 1093 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 VPS39Q96JC1 886 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 CCDC90BQ9GZT6 254 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 POTEB3A0JP26 581 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 POTECB2RU33 542 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 HAUS5O94927 633 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 FSCBQ5H9T9 825 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 GRAMD4Q6IC98 578 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 POTEBQ6S5H4 581 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 TTLL11Q8NHH1 800 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 ING2Q9H160 280 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 ADA2Q9NZK5 511 aa15.12■□□□□ 0.01
PLXNB3-209ENST00000538966 MTMR1Q13613 665 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 ANO4Q32M45 955 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 ZNF699Q32M78 642 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 AGR3Q8TD06 166 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 GANCQ8TET4 914 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 CDC42BPAQ5VT25 1732 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 ERFP50548 548 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 GPS1Q13098 491 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 TBC1D9BQ66K14 1250 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 BZW1Q7L1Q6 419 aaKnown RBP15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 GGT7Q9UJ14 662 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 SNAP23O00161 211 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 NUDCD3Q8IVD9 361 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 MOSPD1Q9UJG1 213 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 UBE4BO95155 1302 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 MAP3K4Q9Y6R4 1608 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 FAM196BA6NMK8 535 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 PRELPP51888 382 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 RAVER2Q9HCJ3 691 aaKnown RBP15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 SUGT1Q9Y2Z0 365 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 DNAJC6O75061 913 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 BBOX1O75936 387 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 PDIA2Q13087 525 aaKnown RBP15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 PFKFB3Q16875 520 aaPredicted RBP15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 CATSPER4Q7RTX7 472 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 FAM160B2Q86V87 743 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 ZBED8Q8IZ13 594 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 IFT43Q96FT9 208 aa15.11■□□□□ 0.01
PLXNB3-209ENST00000538966 ATP6V0A4Q9HBG4 840 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms