RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 RINT1Q6NUQ1 792 aa12.57□□□□□ -0.4
TNFRSF1A-208ENST00000536194 C1orf186Q6ZWK4 172 aa12.57□□□□□ -0.4
TNFRSF1A-208ENST00000536194 HERC6Q8IVU3 1022 aa12.57□□□□□ -0.4
TNFRSF1A-208ENST00000536194 DAW1Q8N136 415 aa12.57□□□□□ -0.4
TNFRSF1A-208ENST00000536194 SYT2Q8N9I0 419 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF1A-208ENST00000536194 RNF149Q8NC42 400 aa12.57□□□□□ -0.4
TNFRSF1A-208ENST00000536194 MCPH1Q8NEM0 835 aa12.57□□□□□ -0.4
TNFRSF1A-208ENST00000536194 PHOSPHO2Q8TCD6 241 aa12.57□□□□□ -0.4
TNFRSF1A-208ENST00000536194 BSNDQ8WZ55 320 aa12.57□□□□□ -0.4
TNFRSF1A-208ENST00000536194 CDK5RAP3Q96JB5 506 aa12.57□□□□□ -0.4
TNFRSF1A-208ENST00000536194 GCOM2Q9BZD3 368 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF1A-208ENST00000536194 YBX2Q9Y2T7 364 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1A-208ENST00000536194 ENPP3O14638 875 aa12.56□□□□□ -0.4
TNFRSF1A-208ENST00000536194 GPR182O15218 404 aa12.56□□□□□ -0.4
TNFRSF1A-208ENST00000536194 ARHGEF15O94989 841 aa12.56□□□□□ -0.4
TNFRSF1A-208ENST00000536194 PLA2G4BP0C869 781 aa12.56□□□□□ -0.4
TNFRSF1A-208ENST00000536194 DNAJB2P25686 324 aa12.56□□□□□ -0.4
TNFRSF1A-208ENST00000536194 CDC42EP1Q00587 391 aa12.56□□□□□ -0.4
TNFRSF1A-208ENST00000536194 MXD4Q14582 209 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF1A-208ENST00000536194 NAALADL2Q58DX5 795 aa12.56□□□□□ -0.4
TNFRSF1A-208ENST00000536194 FAM102BQ5T8I3 360 aa12.56□□□□□ -0.4
TNFRSF1A-208ENST00000536194 SHC4Q6S5L8 630 aa12.56□□□□□ -0.4
TNFRSF1A-208ENST00000536194 MYOCDQ8IZQ8 938 aa12.56□□□□□ -0.4
TNFRSF1A-208ENST00000536194 CRIPAKQ8N1N5 446 aa12.56□□□□□ -0.4
TNFRSF1A-208ENST00000536194 KCTD17Q8N5Z5 321 aa12.56□□□□□ -0.4
TNFRSF1A-208ENST00000536194 CALML4Q96GE6 196 aa12.56□□□□□ -0.4
TNFRSF1A-208ENST00000536194 TSPYL2Q9H2G4 693 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF1A-208ENST00000536194 RCOR1Q9UKL0 485 aa12.56□□□□□ -0.4
TNFRSF1A-208ENST00000536194 PCDHA7Q9UN72 937 aa12.56□□□□□ -0.4
TNFRSF1A-208ENST00000536194 FNDC1Q4ZHG4 1894 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF1A-208ENST00000536194 KIAA1671Q9BY89 1806 aa12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 NLRC5Q86WI3 1866 aa12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 ASAP2O43150 1006 aa12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 CUTAO60888 179 aa12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 HIP1RO75146 1068 aa12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 GJB5O95377 273 aa12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 AMHP03971 560 aa12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 ANP32AP39687 249 aaKnown RBP12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 PTENP60484 403 aa12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 KRT85P78386 507 aa12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 POU5F1BQ06416 359 aa12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 MCM6Q14566 821 aa12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 ARSHQ5FYA8 562 aa12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 FAM117BQ6P1L5 589 aa12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 IFNLR1Q8IU57 520 aaPredicted RBP12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 KCNG4Q8TDN1 519 aa12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 LEO1Q8WVC0 666 aaPredicted RBP12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 RAD54LQ92698 747 aa12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 TOP1MTQ969P6 601 aa12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 ADAM2Q99965 735 aa12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 FTHL17Q9BXU8 183 aa12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 CFAP45Q9UL16 551 aa12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 ADGRA3Q8IWK6 1321 aa12.55□□□□□ -0.4
TNFRSF1A-208ENST00000536194 NPHP3-ACAD11A0A0J9YXS1 232 aa12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 LCHNA4D1U4 455 aa12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 C9IYK1 514 aa12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 SSBP05455 408 aaKnown RBP eCLIP12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 NCLP19338 710 aaKnown RBP12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 SFPQP23246 707 aaKnown RBP eCLIP12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 GUCY2CP25092 1073 aa12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 PHKA2P46019 1235 aa12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 NUCB2P80303 420 aa12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 MBTD1Q05BQ5 628 aa12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 RAD51AP2Q09MP3 1159 aa12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 ODR4Q5SWX8 454 aa12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 CDCA2Q69YH5 1023 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 SRGAP1Q7Z6B7 1085 aa12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 RASSF8Q8NHQ8 419 aa12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 LARP4BQ92615 738 aaKnown RBP12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 KIFC3Q9BVG8 833 aa12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 NFKBIZQ9BYH8 718 aa12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 NKX2-4Q9H2Z4 354 aa12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 TTYH1Q9H313 450 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 RGS18Q9NS28 235 aa12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 PCDHA11Q9Y5I1 949 aa12.54□□□□□ -0.4
TNFRSF1A-208ENST00000536194 LRRIQ4A6NIV6 560 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 SFI1A8K8P3 1242 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 UPP2O95045 317 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 EDN1P05305 212 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 HOXA11P31270 313 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 NAMPTP43490 491 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 ME1P48163 572 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 HTRA4P83105 476 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 CACNB1Q02641 598 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 TFDP1Q14186 410 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 DHX8Q14562 1220 aaKnown RBP12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 AMHR2Q16671 573 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 Q7L0L9 218 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 CATSPER4Q7RTX7 472 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 SPRED2Q7Z698 418 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 GPBP1Q86WP2 473 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 PDILTQ8N807 584 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 KIFAP3Q92845 792 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 REEP2Q9BRK0 252 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 PANK2Q9BZ23 570 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 INO80BQ9C086 356 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 RC3H2Q9HBD1 1191 aaKnown RBP12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 GDPD2Q9HCC8 539 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 TSHZ2Q9NRE2 1034 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 AGPAT5Q9NUQ2 364 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms