RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 FANCCQ00597 558 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 MXD4Q14582 209 aaPredicted RBP25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 GRIK4Q16099 956 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 EDRF1Q3B7T1 1238 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 KAT2BQ92831 832 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 ACCSQ96QU6 501 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 MAGEC2Q9UBF1 373 aaPredicted RBP25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 DDX20Q9UHI6 824 aaKnown RBP25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 TRAF3IP3Q9Y228 551 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 PTCH2Q9Y6C5 1203 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 MSCO60682 206 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 PGK1P00558 417 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 GLRA2P23416 452 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 HOXD13P35453 343 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 CHMP4BP1P59074 171 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 PURAQ00577 322 aaKnown RBP25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 FKBP3Q00688 224 aaKnown RBP25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 EFCAB12Q6NXP0 572 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 SYCP3Q8IZU3 236 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 LRRC71Q8N4P6 559 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 METTL13Q8N6R0 699 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 TMEM161BQ8NDZ6 487 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 ASAP3Q8TDY4 903 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 MYADML2A6NDP7 307 aa25.21■■□□□ 1.63
RBFOX1-206ENST00000535565 KLRC1P26715 233 aa25.21■■□□□ 1.63
RBFOX1-206ENST00000535565 TMOD1P28289 359 aa25.21■■□□□ 1.63
RBFOX1-206ENST00000535565 KCNA1Q09470 495 aa25.21■■□□□ 1.63
RBFOX1-206ENST00000535565 HS2ST1Q7LGA3 356 aa25.21■■□□□ 1.63
RBFOX1-206ENST00000535565 DEPTORQ8TB45 409 aa25.21■■□□□ 1.63
RBFOX1-206ENST00000535565 GOLGA5Q8TBA6 731 aa25.21■■□□□ 1.63
RBFOX1-206ENST00000535565 EXOC7Q9UPT5 735 aa25.21■■□□□ 1.63
RBFOX1-206ENST00000535565 NRCAMQ92823 1304 aa25.21■■□□□ 1.63
RBFOX1-206ENST00000535565 SIP14410 1827 aa25.21■■□□□ 1.63
RBFOX1-206ENST00000535565 ZMYM2Q9UBW7 1377 aa25.21■■□□□ 1.63
RBFOX1-206ENST00000535565 DENND3A2RUS2 1198 aa25.2■■□□□ 1.62
RBFOX1-206ENST00000535565 LRRIQ4A6NIV6 560 aa25.2■■□□□ 1.62
RBFOX1-206ENST00000535565 KCNJ18B7U540 433 aa25.2■■□□□ 1.62
RBFOX1-206ENST00000535565 HAS3O00219 553 aa25.2■■□□□ 1.62
RBFOX1-206ENST00000535565 CBFA2T2O43439 604 aa25.2■■□□□ 1.62
RBFOX1-206ENST00000535565 ADAMTS4O75173 837 aa25.2■■□□□ 1.62
RBFOX1-206ENST00000535565 SMIM10L2AP0DMW4 78 aa25.2■■□□□ 1.62
RBFOX1-206ENST00000535565 SMIM10L2BP0DMW5 78 aa25.2■■□□□ 1.62
RBFOX1-206ENST00000535565 EEF1GP26641 437 aaKnown RBP25.2■■□□□ 1.62
RBFOX1-206ENST00000535565 CCDC173Q0VFZ6 552 aa25.2■■□□□ 1.62
RBFOX1-206ENST00000535565 KCNJ12Q14500 433 aa25.2■■□□□ 1.62
RBFOX1-206ENST00000535565 MTHFD1LQ6UB35 978 aa25.2■■□□□ 1.62
RBFOX1-206ENST00000535565 DNAJC5GQ8N7S2 189 aa25.2■■□□□ 1.62
RBFOX1-206ENST00000535565 PRPF31Q8WWY3 499 aaKnown RBP25.2■■□□□ 1.62
RBFOX1-206ENST00000535565 CTAGE1Q96RT6 745 aa25.2■■□□□ 1.62
RBFOX1-206ENST00000535565 MTG1Q9BT17 334 aaPredicted RBP25.2■■□□□ 1.62
RBFOX1-206ENST00000535565 GBP3Q9H0R5 595 aa25.2■■□□□ 1.62
RBFOX1-206ENST00000535565 HMX1Q9NP08 348 aaPredicted RBP25.2■■□□□ 1.62
RBFOX1-206ENST00000535565 SUCLA2Q9P2R7 463 aaPredicted RBP25.2■■□□□ 1.62
RBFOX1-206ENST00000535565 FRMPD3Q5JV73 1810 aa25.2■■□□□ 1.62
RBFOX1-206ENST00000535565 ZNF75DP51815 510 aa25.19■■□□□ 1.62
RBFOX1-206ENST00000535565 DRP2Q13474 957 aa25.19■■□□□ 1.62
RBFOX1-206ENST00000535565 TCP11X2Q5H9J9 407 aa25.19■■□□□ 1.62
RBFOX1-206ENST00000535565 KSR1Q8IVT5 923 aa25.19■■□□□ 1.62
RBFOX1-206ENST00000535565 CEP63Q96MT8 703 aa25.19■■□□□ 1.62
RBFOX1-206ENST00000535565 KIFC3Q9BVG8 833 aa25.19■■□□□ 1.62
RBFOX1-206ENST00000535565 ARHGAP28Q9P2N2 729 aa25.19■■□□□ 1.62
RBFOX1-206ENST00000535565 TBX20Q9UMR3 447 aa25.19■■□□□ 1.62
RBFOX1-206ENST00000535565 ASAP2O43150 1006 aa25.18■■□□□ 1.62
RBFOX1-206ENST00000535565 TPM3P06753 285 aa25.18■■□□□ 1.62
RBFOX1-206ENST00000535565 RPL13P26373 211 aaKnown RBP25.18■■□□□ 1.62
RBFOX1-206ENST00000535565 CST5P28325 142 aaPredicted RBP25.18■■□□□ 1.62
RBFOX1-206ENST00000535565 MKRN4PQ13434 485 aaPredicted RBP25.18■■□□□ 1.62
RBFOX1-206ENST00000535565 TFDP1Q14186 410 aa25.18■■□□□ 1.62
RBFOX1-206ENST00000535565 CREBRFQ8IUR6 639 aa25.18■■□□□ 1.62
RBFOX1-206ENST00000535565 IFNKQ9P0W0 207 aa25.18■■□□□ 1.62
RBFOX1-206ENST00000535565 CGNQ9P2M7 1197 aaKnown RBP25.18■■□□□ 1.62
RBFOX1-206ENST00000535565 ADGRA3Q8IWK6 1321 aa25.18■■□□□ 1.62
RBFOX1-206ENST00000535565 CLCN3P51790 818 aa25.18■■□□□ 1.62
RBFOX1-206ENST00000535565 UBASH3AP57075 661 aa25.18■■□□□ 1.62
RBFOX1-206ENST00000535565 LAMTOR4Q0VGL1 99 aa25.18■■□□□ 1.62
RBFOX1-206ENST00000535565 CAPSQ13938 189 aa25.18■■□□□ 1.62
RBFOX1-206ENST00000535565 LRRC55Q6ZSA7 311 aa25.18■■□□□ 1.62
RBFOX1-206ENST00000535565 PCSK9Q8NBP7 692 aaKnown RBP25.18■■□□□ 1.62
RBFOX1-206ENST00000535565 LMBR1Q8WVP7 490 aa25.18■■□□□ 1.62
RBFOX1-206ENST00000535565 KCNN1Q92952 543 aa25.18■■□□□ 1.62
RBFOX1-206ENST00000535565 MRFAP1L1Q96HT8 127 aa25.18■■□□□ 1.62
RBFOX1-206ENST00000535565 SETD4Q9NVD3 440 aa25.18■■□□□ 1.62
RBFOX1-206ENST00000535565 PTPN22Q9Y2R2 807 aa25.18■■□□□ 1.62
RBFOX1-206ENST00000535565 SCN10AQ9Y5Y9 1956 aa25.17■■□□□ 1.62
RBFOX1-206ENST00000535565 CETN3O15182 167 aa25.17■■□□□ 1.62
RBFOX1-206ENST00000535565 TGFB1I1O43294 461 aa25.17■■□□□ 1.62
RBFOX1-206ENST00000535565 NR2F2P24468 414 aa25.17■■□□□ 1.62
RBFOX1-206ENST00000535565 SNRPFP62306 86 aaKnown RBP25.17■■□□□ 1.62
RBFOX1-206ENST00000535565 STRN3Q13033 797 aa25.17■■□□□ 1.62
RBFOX1-206ENST00000535565 ADAM9Q13443 819 aa25.17■■□□□ 1.62
RBFOX1-206ENST00000535565 NFIL3Q16649 462 aa25.17■■□□□ 1.62
RBFOX1-206ENST00000535565 RNF180Q86T96 592 aa25.17■■□□□ 1.62
RBFOX1-206ENST00000535565 IRF2BP1Q8IU81 584 aa25.17■■□□□ 1.62
RBFOX1-206ENST00000535565 RHPN2Q8IUC4 686 aa25.17■■□□□ 1.62
RBFOX1-206ENST00000535565 MAP4K3Q8IVH8 894 aa25.17■■□□□ 1.62
RBFOX1-206ENST00000535565 KLHDC9Q8NEP7 349 aa25.17■■□□□ 1.62
RBFOX1-206ENST00000535565 EEF2KMTQ96G04 330 aa25.17■■□□□ 1.62
RBFOX1-206ENST00000535565 CNOT6LQ96LI5 555 aaKnown RBP25.17■■□□□ 1.62
RBFOX1-206ENST00000535565 LIMA1Q9UHB6 759 aaKnown RBP25.17■■□□□ 1.62
RBFOX1-206ENST00000535565 PHLPP2Q6ZVD8 1323 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms