RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 PABPC5Q96DU9 382 aaKnown RBP13.26□□□□□ -0.29
KNTC1-208ENST00000535410 DYDC2Q96IM9 177 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 NLRP4Q96MN2 994 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 HSD17B14Q9BPX1 270 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 EIF2AK1Q9BQI3 630 aaKnown RBP13.26□□□□□ -0.29
KNTC1-208ENST00000535410 FDXACB1Q9BRP7 624 aaPredicted RBP13.26□□□□□ -0.29
KNTC1-208ENST00000535410 TRAIPQ9BWF2 469 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 MRPL9Q9BYD2 267 aaKnown RBP13.26□□□□□ -0.29
KNTC1-208ENST00000535410 DHX33Q9H6R0 707 aaKnown RBP13.26□□□□□ -0.29
KNTC1-208ENST00000535410 RGL1Q9NZL6 768 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 COL4A3BPQ9Y5P4 624 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 STK24Q9Y6E0 443 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 TMEM150BA6NC51 233 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 DGAT1O75907 488 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 LINC00271P0C7V0 271 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 ATP2B1P20020 1258 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 MCM7P33993 719 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 CYP4A11Q02928 519 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 SPIRE1Q08AE8 756 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 TFDP1Q14186 410 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 CTTNQ14247 550 aaKnown RBP13.25□□□□□ -0.29
KNTC1-208ENST00000535410 FAM102BQ5T8I3 360 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 PLA2G4FQ68DD2 849 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 TWF2Q6IBS0 349 aaKnown RBP13.25□□□□□ -0.29
KNTC1-208ENST00000535410 EP400NLQ6ZTU2 488 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 THNSL1Q8IYQ7 743 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 LRRC43Q8N309 656 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 RNF169Q8NCN4 708 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 SPPL3Q8TCT6 385 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 MICAL1Q8TDZ2 1067 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 PRPF31Q8WWY3 499 aaKnown RBP13.25□□□□□ -0.29
KNTC1-208ENST00000535410 PGBD4Q96DM1 585 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 MTMR9Q96QG7 549 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 MTRQ99707 1265 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 SH2D3AQ9BRG2 576 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 ALG13Q9NP73 1137 aaKnown RBP13.25□□□□□ -0.29
KNTC1-208ENST00000535410 TYW1Q9NV66 732 aaKnown RBP13.25□□□□□ -0.29
KNTC1-208ENST00000535410 DAXXQ9UER7 740 aaPredicted RBP13.25□□□□□ -0.29
KNTC1-208ENST00000535410 EVPLQ92817 2033 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 SIP14410 1827 aa13.25□□□□□ -0.29
KNTC1-208ENST00000535410 FAM205CA6NFA0 338 aa13.24□□□□□ -0.29
KNTC1-208ENST00000535410 DTNBO60941 627 aa13.24□□□□□ -0.29
KNTC1-208ENST00000535410 ITGB1P05556 798 aa13.24□□□□□ -0.29
KNTC1-208ENST00000535410 SRGAP2CP0DJJ0 459 aa13.24□□□□□ -0.29
KNTC1-208ENST00000535410 FGFR1P11362 822 aa13.24□□□□□ -0.29
KNTC1-208ENST00000535410 PHKA2P46019 1235 aa13.24□□□□□ -0.29
KNTC1-208ENST00000535410 KCNQ1P51787 676 aa13.24□□□□□ -0.29
KNTC1-208ENST00000535410 POU5F1BQ06416 359 aa13.24□□□□□ -0.29
KNTC1-208ENST00000535410 DRP2Q13474 957 aa13.24□□□□□ -0.29
KNTC1-208ENST00000535410 EMC2Q15006 297 aa13.24□□□□□ -0.29
KNTC1-208ENST00000535410 NOSTRINQ8IVI9 506 aa13.24□□□□□ -0.29
KNTC1-208ENST00000535410 POF1BQ8WVV4 589 aa13.24□□□□□ -0.29
KNTC1-208ENST00000535410 ZNF668Q96K58 619 aaPredicted RBP13.24□□□□□ -0.29
KNTC1-208ENST00000535410 RAB34Q9BZG1 259 aa13.24□□□□□ -0.29
KNTC1-208ENST00000535410 TUFT1Q9NNX1 390 aa13.24□□□□□ -0.29
KNTC1-208ENST00000535410 PIN4Q9Y237 131 aaKnown RBP13.24□□□□□ -0.29
KNTC1-208ENST00000535410 LZTS1Q9Y250 596 aa13.24□□□□□ -0.29
KNTC1-208ENST00000535410 EYSQ5T1H1 3165 aa13.23□□□□□ -0.29
KNTC1-208ENST00000535410 ZNF623O75123 536 aa13.23□□□□□ -0.29
KNTC1-208ENST00000535410 ERLIN2O94905 339 aa13.23□□□□□ -0.29
KNTC1-208ENST00000535410 AXLP30530 894 aa13.23□□□□□ -0.29
KNTC1-208ENST00000535410 ALDH7A1P49419 539 aaKnown RBP13.23□□□□□ -0.29
KNTC1-208ENST00000535410 PLCB3Q01970 1234 aa13.23□□□□□ -0.29
KNTC1-208ENST00000535410 GUCY1B3Q02153 619 aa13.23□□□□□ -0.29
KNTC1-208ENST00000535410 LAMTOR4Q0VGL1 99 aa13.23□□□□□ -0.29
KNTC1-208ENST00000535410 COL19A1Q14993 1142 aa13.23□□□□□ -0.29
KNTC1-208ENST00000535410 GLB1LQ6UWU2 654 aa13.23□□□□□ -0.29
KNTC1-208ENST00000535410 FERMT3Q86UX7 667 aa13.23□□□□□ -0.29
KNTC1-208ENST00000535410 COLGALT1Q8NBJ5 622 aa13.23□□□□□ -0.29
KNTC1-208ENST00000535410 CNNM3Q8NE01 707 aa13.23□□□□□ -0.29
KNTC1-208ENST00000535410 TMEM143Q96AN5 459 aa13.23□□□□□ -0.29
KNTC1-208ENST00000535410 ZNF558Q96NG5 402 aa13.23□□□□□ -0.29
KNTC1-208ENST00000535410 CASD1Q96PB1 797 aa13.23□□□□□ -0.29
KNTC1-208ENST00000535410 NACC1Q96RE7 527 aa13.23□□□□□ -0.29
KNTC1-208ENST00000535410 CDCA3Q99618 268 aaPredicted RBP13.23□□□□□ -0.29
KNTC1-208ENST00000535410 KIF2CQ99661 725 aa13.23□□□□□ -0.29
KNTC1-208ENST00000535410 UBN1Q9NPG3 1134 aa13.23□□□□□ -0.29
KNTC1-208ENST00000535410 CLDND1Q9NY35 253 aa13.23□□□□□ -0.29
KNTC1-208ENST00000535410 STK39Q9UEW8 545 aa13.23□□□□□ -0.29
KNTC1-208ENST00000535410 FGF18O76093 207 aa13.22□□□□□ -0.29
KNTC1-208ENST00000535410 OR52Z1P0C646 297 aa13.22□□□□□ -0.29
KNTC1-208ENST00000535410 SRGAP2BP0DMP2 458 aa13.22□□□□□ -0.29
KNTC1-208ENST00000535410 MUTP22033 750 aa13.22□□□□□ -0.29
KNTC1-208ENST00000535410 FGFR4P22455 802 aa13.22□□□□□ -0.29
KNTC1-208ENST00000535410 GATMP50440 423 aa13.22□□□□□ -0.29
KNTC1-208ENST00000535410 ST3GAL1Q11201 340 aa13.22□□□□□ -0.29
KNTC1-208ENST00000535410 ZNF174Q15697 407 aa13.22□□□□□ -0.29
KNTC1-208ENST00000535410 TTC38Q5R3I4 469 aa13.22□□□□□ -0.29
KNTC1-208ENST00000535410 HAUS3Q68CZ6 603 aa13.22□□□□□ -0.29
KNTC1-208ENST00000535410 PTCRAQ6ISU1 281 aaPredicted RBP13.22□□□□□ -0.29
KNTC1-208ENST00000535410 KSR1Q8IVT5 923 aa13.22□□□□□ -0.29
KNTC1-208ENST00000535410 RNF149Q8NC42 400 aa13.22□□□□□ -0.29
KNTC1-208ENST00000535410 MCPH1Q8NEM0 835 aa13.22□□□□□ -0.29
KNTC1-208ENST00000535410 POLR3CQ9BUI4 534 aaPredicted RBP13.22□□□□□ -0.29
KNTC1-208ENST00000535410 IFT122Q9HBG6 1241 aa13.22□□□□□ -0.29
KNTC1-208ENST00000535410 NGRNQ9NPE2 291 aaKnown RBP13.22□□□□□ -0.29
KNTC1-208ENST00000535410 TLR9Q9NR96 1032 aa13.22□□□□□ -0.29
KNTC1-208ENST00000535410 SPG21Q9NZD8 308 aa13.22□□□□□ -0.29
KNTC1-208ENST00000535410 KANSL3Q9P2N6 904 aa13.22□□□□□ -0.29
KNTC1-208ENST00000535410 WRAP73Q9P2S5 460 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms