RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 PPP1R16BQ96T49 567 aa17.22■□□□□ 0.35
UBXN1-217ENST00000534176 MRPL9Q9BYD2 267 aaKnown RBP17.22■□□□□ 0.35
UBXN1-217ENST00000534176 NFKBIZQ9BYH8 718 aa17.22■□□□□ 0.35
UBXN1-217ENST00000534176 TMEM117Q9H0C3 514 aa17.22■□□□□ 0.35
UBXN1-217ENST00000534176 WRAP73Q9P2S5 460 aaPredicted RBP17.22■□□□□ 0.35
UBXN1-217ENST00000534176 PCDHB12Q9Y5F1 795 aa17.22■□□□□ 0.35
UBXN1-217ENST00000534176 TRANK1O15050 2925 aa17.21■□□□□ 0.35
UBXN1-217ENST00000534176 A0A087WZ62 844 aa17.21■□□□□ 0.35
UBXN1-217ENST00000534176 BMP15O95972 392 aa17.21■□□□□ 0.35
UBXN1-217ENST00000534176 AXLP30530 894 aa17.21■□□□□ 0.35
UBXN1-217ENST00000534176 TECP42680 631 aa17.21■□□□□ 0.35
UBXN1-217ENST00000534176 RARRES1P49788 294 aa17.21■□□□□ 0.35
UBXN1-217ENST00000534176 UBE3AQ05086 875 aa17.21■□□□□ 0.35
UBXN1-217ENST00000534176 CCDC85BQ15834 202 aaPredicted RBP17.21■□□□□ 0.35
UBXN1-217ENST00000534176 MCTP1Q6DN14 999 aa17.21■□□□□ 0.35
UBXN1-217ENST00000534176 CATSPER4Q7RTX7 472 aa17.21■□□□□ 0.35
UBXN1-217ENST00000534176 FERMT3Q86UX7 667 aa17.21■□□□□ 0.35
UBXN1-217ENST00000534176 MICALL1Q8N3F8 863 aa17.21■□□□□ 0.35
UBXN1-217ENST00000534176 PRPF31Q8WWY3 499 aaKnown RBP17.21■□□□□ 0.35
UBXN1-217ENST00000534176 FDXACB1Q9BRP7 624 aaPredicted RBP17.21■□□□□ 0.35
UBXN1-217ENST00000534176 TMEM60Q9H2L4 133 aa17.21■□□□□ 0.35
UBXN1-217ENST00000534176 COL4A4P53420 1690 aaPredicted RBP17.2■□□□□ 0.34
UBXN1-217ENST00000534176 TMEM150BA6NC51 233 aa17.2■□□□□ 0.34
UBXN1-217ENST00000534176 POTEMA6NI47 508 aa17.2■□□□□ 0.34
UBXN1-217ENST00000534176 RFXAPO00287 272 aa17.2■□□□□ 0.34
UBXN1-217ENST00000534176 MGEA5O60502 916 aa17.2■□□□□ 0.34
UBXN1-217ENST00000534176 PDIA4P13667 645 aaKnown RBP17.2■□□□□ 0.34
UBXN1-217ENST00000534176 LAMTOR4Q0VGL1 99 aa17.2■□□□□ 0.34
UBXN1-217ENST00000534176 DRP2Q13474 957 aa17.2■□□□□ 0.34
UBXN1-217ENST00000534176 LARP1BQ659C4 914 aaKnown RBP17.2■□□□□ 0.34
UBXN1-217ENST00000534176 BRAPQ7Z569 592 aa17.2■□□□□ 0.34
UBXN1-217ENST00000534176 CATSPER3Q86XQ3 398 aa17.2■□□□□ 0.34
UBXN1-217ENST00000534176 LRRC43Q8N309 656 aa17.2■□□□□ 0.34
UBXN1-217ENST00000534176 CNNM3Q8NE01 707 aa17.2■□□□□ 0.34
UBXN1-217ENST00000534176 HLA-CQ95604 372 aa17.2■□□□□ 0.34
UBXN1-217ENST00000534176 PGBD4Q96DM1 585 aa17.2■□□□□ 0.34
UBXN1-217ENST00000534176 CCDC51Q96ER9 411 aa17.2■□□□□ 0.34
UBXN1-217ENST00000534176 IFT122Q9HBG6 1241 aa17.2■□□□□ 0.34
UBXN1-217ENST00000534176 LRWD1Q9UFC0 647 aa17.2■□□□□ 0.34
UBXN1-217ENST00000534176 NLRC5Q86WI3 1866 aa17.2■□□□□ 0.34
UBXN1-217ENST00000534176 WNT7AO00755 349 aa17.19■□□□□ 0.34
UBXN1-217ENST00000534176 ZNF623O75123 536 aa17.19■□□□□ 0.34
UBXN1-217ENST00000534176 ERLIN2O94905 339 aa17.19■□□□□ 0.34
UBXN1-217ENST00000534176 LAG3P18627 525 aa17.19■□□□□ 0.34
UBXN1-217ENST00000534176 PPM1AP35813 382 aa17.19■□□□□ 0.34
UBXN1-217ENST00000534176 PTGDRQ13258 359 aa17.19■□□□□ 0.34
UBXN1-217ENST00000534176 CUL4AQ13619 759 aa17.19■□□□□ 0.34
UBXN1-217ENST00000534176 ARL6IP4Q66PJ3 421 aaKnown RBP17.19■□□□□ 0.34
UBXN1-217ENST00000534176 TWF2Q6IBS0 349 aaKnown RBP17.19■□□□□ 0.34
UBXN1-217ENST00000534176 PDE12Q6L8Q7 609 aaKnown RBP17.19■□□□□ 0.34
UBXN1-217ENST00000534176 DTHD1Q6ZMT9 781 aa17.19■□□□□ 0.34
UBXN1-217ENST00000534176 ECHDC2Q86YB7 292 aa17.19■□□□□ 0.34
UBXN1-217ENST00000534176 IFNLR1Q8IU57 520 aaPredicted RBP17.19■□□□□ 0.34
UBXN1-217ENST00000534176 IGSF22Q8N9C0 903 aa17.19■□□□□ 0.34
UBXN1-217ENST00000534176 RNF149Q8NC42 400 aa17.19■□□□□ 0.34
UBXN1-217ENST00000534176 INTS4Q96HW7 963 aaKnown RBP17.19■□□□□ 0.34
UBXN1-217ENST00000534176 ASB2Q96Q27 587 aa17.19■□□□□ 0.34
UBXN1-217ENST00000534176 SH2D3AQ9BRG2 576 aa17.19■□□□□ 0.34
UBXN1-217ENST00000534176 NSUN3Q9H649 340 aaKnown RBP17.19■□□□□ 0.34
UBXN1-217ENST00000534176 AGPAT5Q9NUQ2 364 aa17.19■□□□□ 0.34
UBXN1-217ENST00000534176 STK39Q9UEW8 545 aa17.19■□□□□ 0.34
UBXN1-217ENST00000534176 PIN4Q9Y237 131 aaKnown RBP17.19■□□□□ 0.34
UBXN1-217ENST00000534176 PRRC2BQ5JSZ5 2229 aaKnown RBP17.19■□□□□ 0.34
UBXN1-217ENST00000534176 TBKBP1A7MCY6 615 aa17.18■□□□□ 0.34
UBXN1-217ENST00000534176 SLC26A4O43511 780 aa17.18■□□□□ 0.34
UBXN1-217ENST00000534176 LINC00271P0C7V0 271 aa17.18■□□□□ 0.34
UBXN1-217ENST00000534176 SPATA31C1P0DKV0 1188 aa17.18■□□□□ 0.34
UBXN1-217ENST00000534176 SPOUT1Q5T280 376 aaKnown RBP17.18■□□□□ 0.34
UBXN1-217ENST00000534176 KRT79Q5XKE5 535 aa17.18■□□□□ 0.34
UBXN1-217ENST00000534176 C4orf32Q8N8J7 132 aa17.18■□□□□ 0.34
UBXN1-217ENST00000534176 TMEM143Q96AN5 459 aa17.18■□□□□ 0.34
UBXN1-217ENST00000534176 UBN1Q9NPG3 1134 aa17.18■□□□□ 0.34
UBXN1-217ENST00000534176 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.18■□□□□ 0.34
UBXN1-217ENST00000534176 KCNG1Q9UIX4 513 aa17.18■□□□□ 0.34
UBXN1-217ENST00000534176 MRPL42Q9Y6G3 142 aaKnown RBP17.18■□□□□ 0.34
UBXN1-217ENST00000534176 PHLPP2Q6ZVD8 1323 aa17.18■□□□□ 0.34
UBXN1-217ENST00000534176 ARID2Q68CP9 1835 aa17.17■□□□□ 0.34
UBXN1-217ENST00000534176 ARHGEF35A5YM69 484 aa17.17■□□□□ 0.34
UBXN1-217ENST00000534176 DLL1O00548 723 aa17.17■□□□□ 0.34
UBXN1-217ENST00000534176 CD2BP2O95400 341 aaKnown RBP17.17■□□□□ 0.34
UBXN1-217ENST00000534176 SRGAP2CP0DJJ0 459 aa17.17■□□□□ 0.34
UBXN1-217ENST00000534176 PTENP60484 403 aa17.17■□□□□ 0.34
UBXN1-217ENST00000534176 PPP2R5AQ15172 486 aa17.17■□□□□ 0.34
UBXN1-217ENST00000534176 PUS10Q3MIT2 529 aaKnown RBP17.17■□□□□ 0.34
UBXN1-217ENST00000534176 SPRED2Q7Z698 418 aa17.17■□□□□ 0.34
UBXN1-217ENST00000534176 HACE1Q8IYU2 909 aa17.17■□□□□ 0.34
UBXN1-217ENST00000534176 PIGOQ8TEQ8 1089 aa17.17■□□□□ 0.34
UBXN1-217ENST00000534176 PRIMPOLQ96LW4 560 aa17.17■□□□□ 0.34
UBXN1-217ENST00000534176 PUF60Q9UHX1 559 aaKnown RBP17.17■□□□□ 0.34
UBXN1-217ENST00000534176 LZTS1Q9Y250 596 aa17.17■□□□□ 0.34
UBXN1-217ENST00000534176 CNTNAP2Q9UHC6 1331 aa17.17■□□□□ 0.34
UBXN1-217ENST00000534176 ARL2P36404 184 aa17.16■□□□□ 0.34
UBXN1-217ENST00000534176 CCT6AP40227 531 aaKnown RBP17.16■□□□□ 0.34
UBXN1-217ENST00000534176 TOB1P50616 345 aaPredicted RBP17.16■□□□□ 0.34
UBXN1-217ENST00000534176 ATP2C1P98194 919 aaPredicted RBP17.16■□□□□ 0.34
UBXN1-217ENST00000534176 BMS1Q14692 1282 aaKnown RBP17.16■□□□□ 0.34
UBXN1-217ENST00000534176 PAN2Q504Q3 1202 aaKnown RBP17.16■□□□□ 0.34
UBXN1-217ENST00000534176 NOTUMQ6P988 496 aa17.16■□□□□ 0.34
UBXN1-217ENST00000534176 GLB1LQ6UWU2 654 aa17.16■□□□□ 0.34
UBXN1-217ENST00000534176 ZNF598Q86UK7 904 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms