RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 NLRP7Q8WX94 980 aa20.33■□□□□ 0.85
UBXN1-216ENST00000533908 LARP6Q9BRS8 491 aaKnown RBP20.33■□□□□ 0.85
UBXN1-216ENST00000533908 A0A087WZ62 844 aa20.32■□□□□ 0.84
UBXN1-216ENST00000533908 FSD2A1L4K1 749 aa20.32■□□□□ 0.84
UBXN1-216ENST00000533908 C2orf71A6NGG8 1288 aa20.32■□□□□ 0.84
UBXN1-216ENST00000533908 SP100P23497 879 aaPredicted RBP20.32■□□□□ 0.84
UBXN1-216ENST00000533908 PPM1AP35813 382 aa20.32■□□□□ 0.84
UBXN1-216ENST00000533908 SIGLEC14Q08ET2 396 aa20.32■□□□□ 0.84
UBXN1-216ENST00000533908 MIER3Q7Z3K6 550 aa20.32■□□□□ 0.84
UBXN1-216ENST00000533908 FBXL6Q8N531 539 aa20.32■□□□□ 0.84
UBXN1-216ENST00000533908 SCLT1Q96NL6 688 aa20.32■□□□□ 0.84
UBXN1-216ENST00000533908 AIFM3Q96NN9 605 aa20.32■□□□□ 0.84
UBXN1-216ENST00000533908 FDXACB1Q9BRP7 624 aaPredicted RBP20.32■□□□□ 0.84
UBXN1-216ENST00000533908 PCDHA4Q9UN74 947 aa20.32■□□□□ 0.84
UBXN1-216ENST00000533908 HCFC2Q9Y5Z7 792 aa20.32■□□□□ 0.84
UBXN1-216ENST00000533908 MEIS3P2A8K0S8 358 aa20.31■□□□□ 0.84
UBXN1-216ENST00000533908 CLASP2O75122 1294 aaKnown RBP20.31■□□□□ 0.84
UBXN1-216ENST00000533908 HOXB8P17481 243 aaPredicted RBP20.31■□□□□ 0.84
UBXN1-216ENST00000533908 BCAR1P56945 870 aa20.31■□□□□ 0.84
UBXN1-216ENST00000533908 PTPN21Q16825 1174 aa20.31■□□□□ 0.84
UBXN1-216ENST00000533908 LONRF3Q496Y0 759 aa20.31■□□□□ 0.84
UBXN1-216ENST00000533908 XKR3Q5GH77 459 aa20.31■□□□□ 0.84
UBXN1-216ENST00000533908 KANK3Q6NY19 840 aa20.31■□□□□ 0.84
UBXN1-216ENST00000533908 TMEM173Q86WV6 379 aaPredicted RBP20.31■□□□□ 0.84
UBXN1-216ENST00000533908 KSR1Q8IVT5 923 aa20.31■□□□□ 0.84
UBXN1-216ENST00000533908 ETNPPLQ8TBG4 499 aa20.31■□□□□ 0.84
UBXN1-216ENST00000533908 LPPQ93052 612 aa20.31■□□□□ 0.84
UBXN1-216ENST00000533908 MBOAT7Q96N66 472 aa20.31■□□□□ 0.84
UBXN1-216ENST00000533908 SEPT9Q9UHD8 586 aaPredicted RBP20.31■□□□□ 0.84
UBXN1-216ENST00000533908 ZDBF2Q9HCK1 2354 aa20.3■□□□□ 0.84
UBXN1-216ENST00000533908 PSMA5P28066 241 aa20.3■□□□□ 0.84
UBXN1-216ENST00000533908 PHKA2P46019 1235 aa20.3■□□□□ 0.84
UBXN1-216ENST00000533908 VCPP55072 806 aaKnown RBP20.3■□□□□ 0.84
UBXN1-216ENST00000533908 TCF15Q12870 199 aa20.3■□□□□ 0.84
UBXN1-216ENST00000533908 SMC1AQ14683 1233 aaKnown RBP20.3■□□□□ 0.84
UBXN1-216ENST00000533908 RUFY3Q7L099 469 aa20.3■□□□□ 0.84
UBXN1-216ENST00000533908 RDM1Q8NG50 284 aa20.3■□□□□ 0.84
UBXN1-216ENST00000533908 FEZF2Q8TBJ5 459 aa20.3■□□□□ 0.84
UBXN1-216ENST00000533908 AUTS2Q8WXX7 1259 aa20.3■□□□□ 0.84
UBXN1-216ENST00000533908 GCOM2Q9BZD3 368 aaPredicted RBP20.3■□□□□ 0.84
UBXN1-216ENST00000533908 ZSWIM6Q9HCJ5 1215 aa20.3■□□□□ 0.84
UBXN1-216ENST00000533908 CHST12Q9NRB3 414 aa20.3■□□□□ 0.84
UBXN1-216ENST00000533908 DACT1Q9NYF0 836 aa20.3■□□□□ 0.84
UBXN1-216ENST00000533908 DDX11L8A8MPP1 907 aa20.29■□□□□ 0.84
UBXN1-216ENST00000533908 EML1O00423 815 aa20.29■□□□□ 0.84
UBXN1-216ENST00000533908 MAFO75444 373 aaPredicted RBP20.29■□□□□ 0.84
UBXN1-216ENST00000533908 CXCL14O95715 111 aa20.29■□□□□ 0.84
UBXN1-216ENST00000533908 WEE2P0C1S8 567 aa20.29■□□□□ 0.84
UBXN1-216ENST00000533908 SRGAP2BP0DMP2 458 aa20.29■□□□□ 0.84
UBXN1-216ENST00000533908 SSRP1Q08945 709 aaKnown RBP20.29■□□□□ 0.84
UBXN1-216ENST00000533908 ANO5Q75V66 913 aa20.29■□□□□ 0.84
UBXN1-216ENST00000533908 BLIDQ8IZY5 108 aa20.29■□□□□ 0.84
UBXN1-216ENST00000533908 C12orf76Q8N812 135 aaPredicted RBP20.29■□□□□ 0.84
UBXN1-216ENST00000533908 ZNF579Q8NAF0 562 aaKnown RBP20.29■□□□□ 0.84
UBXN1-216ENST00000533908 BCL7CQ8WUZ0 217 aaPredicted RBP20.29■□□□□ 0.84
UBXN1-216ENST00000533908 TRAIPQ9BWF2 469 aa20.29■□□□□ 0.84
UBXN1-216ENST00000533908 POMKQ9H5K3 350 aa20.29■□□□□ 0.84
UBXN1-216ENST00000533908 SUCLA2Q9P2R7 463 aaPredicted RBP20.29■□□□□ 0.84
UBXN1-216ENST00000533908 B4GALT3O60512 393 aa20.28■□□□□ 0.84
UBXN1-216ENST00000533908 PDGFBP01127 241 aaPredicted RBP20.28■□□□□ 0.84
UBXN1-216ENST00000533908 ALDH7A1P49419 539 aaKnown RBP20.28■□□□□ 0.84
UBXN1-216ENST00000533908 RHPN2Q8IUC4 686 aa20.28■□□□□ 0.84
UBXN1-216ENST00000533908 SUGP1Q8IWZ8 645 aaKnown RBP20.28■□□□□ 0.84
UBXN1-216ENST00000533908 VPS52Q8N1B4 723 aa20.28■□□□□ 0.84
UBXN1-216ENST00000533908 CASP10Q92851 521 aa20.28■□□□□ 0.84
UBXN1-216ENST00000533908 ADAM7Q9H2U9 754 aa20.28■□□□□ 0.84
UBXN1-216ENST00000533908 NRDE2Q9H7Z3 1164 aa20.28■□□□□ 0.84
UBXN1-216ENST00000533908 KMT2EQ8IZD2 1858 aa20.28■□□□□ 0.84
UBXN1-216ENST00000533908 SLC37A4O43826 429 aa20.27■□□□□ 0.84
UBXN1-216ENST00000533908 DTNBO60941 627 aa20.27■□□□□ 0.84
UBXN1-216ENST00000533908 OFD1O75665 1012 aa20.27■□□□□ 0.84
UBXN1-216ENST00000533908 AVPR2P30518 371 aa20.27■□□□□ 0.84
UBXN1-216ENST00000533908 CDC42EP1Q00587 391 aa20.27■□□□□ 0.84
UBXN1-216ENST00000533908 PLA2G4FQ68DD2 849 aa20.27■□□□□ 0.84
UBXN1-216ENST00000533908 TRIM22Q8IYM9 498 aa20.27■□□□□ 0.84
UBXN1-216ENST00000533908 DAGLBQ8NCG7 672 aa20.27■□□□□ 0.84
UBXN1-216ENST00000533908 VN1R3Q9BXE9 311 aa20.27■□□□□ 0.84
UBXN1-216ENST00000533908 MRPL9Q9BYD2 267 aaKnown RBP20.27■□□□□ 0.84
UBXN1-216ENST00000533908 ZBP1Q9H171 429 aa20.27■□□□□ 0.84
UBXN1-216ENST00000533908 SMOC2Q9H3U7 446 aa20.27■□□□□ 0.84
UBXN1-216ENST00000533908 TSHZ2Q9NRE2 1034 aa20.27■□□□□ 0.84
UBXN1-216ENST00000533908 TBC1D13Q9NVG8 400 aa20.27■□□□□ 0.84
UBXN1-216ENST00000533908 C2CD4DB7Z1M9 353 aa20.26■□□□□ 0.83
UBXN1-216ENST00000533908 ZNF623O75123 536 aa20.26■□□□□ 0.83
UBXN1-216ENST00000533908 ZC3H11AO75152 810 aaKnown RBP eCLIP20.26■□□□□ 0.83
UBXN1-216ENST00000533908 GALTP07902 379 aa20.26■□□□□ 0.83
UBXN1-216ENST00000533908 DNM2P50570 870 aa20.26■□□□□ 0.83
UBXN1-216ENST00000533908 AFF1P51825 1210 aaKnown RBP20.26■□□□□ 0.83
UBXN1-216ENST00000533908 NPEPPSP55786 919 aa20.26■□□□□ 0.83
UBXN1-216ENST00000533908 INF2Q27J81 1249 aa20.26■□□□□ 0.83
UBXN1-216ENST00000533908 TWF2Q6IBS0 349 aaKnown RBP20.26■□□□□ 0.83
UBXN1-216ENST00000533908 MOXD1Q6UVY6 613 aa20.26■□□□□ 0.83
UBXN1-216ENST00000533908 KREMEN2Q8NCW0 462 aa20.26■□□□□ 0.83
UBXN1-216ENST00000533908 SLC22A17Q8WUG5 538 aa20.26■□□□□ 0.83
UBXN1-216ENST00000533908 ZNF274Q96GC6 653 aaPredicted RBP20.26■□□□□ 0.83
UBXN1-216ENST00000533908 IGSF21Q96ID5 467 aa20.26■□□□□ 0.83
UBXN1-216ENST00000533908 C22orf23Q9BZE7 217 aa20.26■□□□□ 0.83
UBXN1-216ENST00000533908 IFT122Q9HBG6 1241 aa20.26■□□□□ 0.83
UBXN1-216ENST00000533908 FAM105AQ9NUU6 356 aa20.26■□□□□ 0.83
UBXN1-216ENST00000533908 WRAP73Q9P2S5 460 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms