RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 ARMCX3Q9UH62 379 aaPredicted RBP10.6□□□□□ -0.71
CHKA-207ENST00000533728 DBR1Q9UK59 544 aaKnown RBP10.6□□□□□ -0.71
CHKA-207ENST00000533728 RAB21Q9UL25 225 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 CCPG1Q9ULG6 757 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 UBIAD1Q9Y5Z9 338 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 BZW2Q9Y6E2 419 aaKnown RBP10.6□□□□□ -0.71
CHKA-207ENST00000533728 LTBP2Q14767 1821 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 A0A0G2JMZ2 1700 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 LCTP09848 1927 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 CTAGE15A4D2H0 777 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 ADCY3O60266 1144 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 FAM13AO94988 1023 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 ZRANB2O95218 330 aaKnown RBP eCLIP10.59□□□□□ -0.71
CHKA-207ENST00000533728 SERPING1P05155 500 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 CTAGE8P0CG41 777 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 EPB41P11171 864 aaKnown RBP10.59□□□□□ -0.71
CHKA-207ENST00000533728 NR2F2P24468 414 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 IREB2P48200 963 aaKnown RBP10.59□□□□□ -0.71
CHKA-207ENST00000533728 KCNQ1P51787 676 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 CLCN6P51797 869 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 KIF11P52732 1056 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 C9orf50Q5SZB4 431 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 SFMBT2Q5VUG0 894 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 CCDC174Q6PII3 467 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 TMCO3Q6UWJ1 677 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 CACNA2D4Q7Z3S7 1137 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 CTAGE6Q86UF2 777 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 SLC9A9Q8IVB4 645 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 CTAGE4Q8IX94 777 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 SMAP1Q8IYB5 467 aaPredicted RBP10.59□□□□□ -0.71
CHKA-207ENST00000533728 LRRN4CLQ8ND94 238 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 GLIS3Q8NEA6 775 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 CYP2W1Q8TAV3 490 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 CLEC4DQ8WXI8 215 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 RUBCNQ92622 972 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 C12orf42Q96LP6 360 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 ZNF577Q9BSK1 485 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 RUSC1Q9BVN2 902 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 ZNF341Q9BYN7 854 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 IRX2Q9BZI1 471 aaPredicted RBP10.59□□□□□ -0.71
CHKA-207ENST00000533728 BHMT2Q9H2M3 363 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 PARVGQ9HBI0 331 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 AS3MTQ9HBK9 375 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 TBC1D22BQ9NU19 505 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 ARHGAP20Q9P2F6 1191 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 GVINP1Q7Z2Y8 2422 aa10.59□□□□□ -0.71
CHKA-207ENST00000533728 NPHP3-ACAD11A0A0J9YXS1 232 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 BTNL10A8MVZ5 291 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 IPO5O00410 1097 aaKnown RBP10.58□□□□□ -0.72
CHKA-207ENST00000533728 TACC1O75410 805 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 GFPT2O94808 682 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 NOL4O94818 638 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 AFPP02771 609 aaKnown RBP10.58□□□□□ -0.72
CHKA-207ENST00000533728 NR3C1P04150 777 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 P4HBP07237 508 aaKnown RBP10.58□□□□□ -0.72
CHKA-207ENST00000533728 ELNP15502 786 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 MCM3P25205 808 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 INPP5BP32019 993 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 HOXD13P35453 343 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 KLK7P49862 253 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 MCCD1P59942 119 aaPredicted RBP10.58□□□□□ -0.72
CHKA-207ENST00000533728 TFF2Q03403 129 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 ACAP1Q15027 740 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 PPP2R5AQ15172 486 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 IQCEQ6IPM2 695 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.58□□□□□ -0.72
CHKA-207ENST00000533728 MIGA2Q7L4E1 593 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 RRAGAQ7L523 313 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 ZNF572Q7Z3I7 529 aaPredicted RBP10.58□□□□□ -0.72
CHKA-207ENST00000533728 C12orf56Q8IXR9 622 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 ANKRD13AQ8IZ07 590 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 KRT222Q8N1A0 295 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 TBC1D5Q92609 795 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 SECISBP2LQ93073 1101 aaKnown RBP10.58□□□□□ -0.72
CHKA-207ENST00000533728 VTI1AQ96AJ9 217 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 DYDC2Q96IM9 177 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 STRA6Q9BX79 667 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 IFIH1Q9BYX4 1025 aaKnown RBP10.58□□□□□ -0.72
CHKA-207ENST00000533728 TANGO6Q9C0B7 1094 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 GBP3Q9H0R5 595 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 GANQ9H2C0 597 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 ST6GALNAC4Q9H4F1 302 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 JADE2Q9NQC1 790 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 FAM207AQ9NSI2 230 aaPredicted RBP10.58□□□□□ -0.72
CHKA-207ENST00000533728 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.58□□□□□ -0.72
CHKA-207ENST00000533728 PPP1R9AQ9ULJ8 1098 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 GUCA1BQ9UMX6 200 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 PCDHB13Q9Y5F0 798 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 PCDHA13Q9Y5I0 950 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 SAR1BQ9Y6B6 198 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 V9GYY5 206 aaPredicted RBP10.58□□□□□ -0.72
CHKA-207ENST00000533728 SIP14410 1827 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 LRRC37A2A6NM11 1700 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 ASTN1O14525 1302 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 PFASO15067 1338 aa10.58□□□□□ -0.72
CHKA-207ENST00000533728 USP24Q9UPU5 2620 aa10.57□□□□□ -0.72
CHKA-207ENST00000533728 A0A0U1RQJ8 604 aa10.57□□□□□ -0.72
CHKA-207ENST00000533728 LRRC53A6NM62 1247 aa10.57□□□□□ -0.72
CHKA-207ENST00000533728 C19orf81C9J6K1 198 aa10.57□□□□□ -0.72
CHKA-207ENST00000533728 ATP2A1O14983 1001 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms