RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 NSUN3Q9H649 340 aaKnown RBP24.87■■□□□ 1.57
BEST1-207ENST00000533521 IFT122Q9HBG6 1241 aa24.87■■□□□ 1.57
BEST1-207ENST00000533521 TUFT1Q9NNX1 390 aa24.87■■□□□ 1.57
BEST1-207ENST00000533521 NOL7Q9UMY1 257 aaKnown RBP24.87■■□□□ 1.57
BEST1-207ENST00000533521 VCANP13611 3396 aa24.86■■□□□ 1.57
BEST1-207ENST00000533521 MUTP22033 750 aa24.86■■□□□ 1.57
BEST1-207ENST00000533521 MXD4Q14582 209 aaPredicted RBP24.86■■□□□ 1.57
BEST1-207ENST00000533521 ZNF598Q86UK7 904 aaKnown RBP24.86■■□□□ 1.57
BEST1-207ENST00000533521 PRPF31Q8WWY3 499 aaKnown RBP24.86■■□□□ 1.57
BEST1-207ENST00000533521 ATG2AQ2TAZ0 1938 aa24.85■■□□□ 1.57
BEST1-207ENST00000533521 GRM6O15303 877 aa24.85■■□□□ 1.57
BEST1-207ENST00000533521 DGAT1O75907 488 aa24.85■■□□□ 1.57
BEST1-207ENST00000533521 OR52Z1P0C646 297 aa24.85■■□□□ 1.57
BEST1-207ENST00000533521 UBE3AQ05086 875 aa24.85■■□□□ 1.57
BEST1-207ENST00000533521 GNL2Q13823 731 aaKnown RBP24.85■■□□□ 1.57
BEST1-207ENST00000533521 EMC2Q15006 297 aa24.85■■□□□ 1.57
BEST1-207ENST00000533521 PAN2Q504Q3 1202 aaKnown RBP24.85■■□□□ 1.57
BEST1-207ENST00000533521 TTC38Q5R3I4 469 aa24.85■■□□□ 1.57
BEST1-207ENST00000533521 FAM102BQ5T8I3 360 aa24.85■■□□□ 1.57
BEST1-207ENST00000533521 TMX3Q96JJ7 454 aa24.85■■□□□ 1.57
BEST1-207ENST00000533521 POLR3CQ9BUI4 534 aaPredicted RBP24.85■■□□□ 1.57
BEST1-207ENST00000533521 PCDHB12Q9Y5F1 795 aa24.85■■□□□ 1.57
BEST1-207ENST00000533521 MYO7AQ13402 2215 aa24.84■■□□□ 1.57
BEST1-207ENST00000533521 TBKBP1A7MCY6 615 aa24.84■■□□□ 1.57
BEST1-207ENST00000533521 ZNF623O75123 536 aa24.84■■□□□ 1.57
BEST1-207ENST00000533521 TFF2Q03403 129 aa24.84■■□□□ 1.57
BEST1-207ENST00000533521 LAMTOR4Q0VGL1 99 aa24.84■■□□□ 1.57
BEST1-207ENST00000533521 FERMT3Q86UX7 667 aa24.84■■□□□ 1.57
BEST1-207ENST00000533521 IFNLR1Q8IU57 520 aaPredicted RBP24.84■■□□□ 1.57
BEST1-207ENST00000533521 SPPL3Q8TCT6 385 aa24.84■■□□□ 1.57
BEST1-207ENST00000533521 ZNF668Q96K58 619 aaPredicted RBP24.84■■□□□ 1.57
BEST1-207ENST00000533521 NLRP4Q96MN2 994 aa24.84■■□□□ 1.57
BEST1-207ENST00000533521 MTRQ99707 1265 aa24.84■■□□□ 1.57
BEST1-207ENST00000533521 UBE2ZQ9H832 354 aaPredicted RBP24.84■■□□□ 1.57
BEST1-207ENST00000533521 CARNS1A5YM72 827 aa24.83■■□□□ 1.57
BEST1-207ENST00000533521 SPATA31C1P0DKV0 1188 aa24.83■■□□□ 1.57
BEST1-207ENST00000533521 RARRES1P49788 294 aa24.83■■□□□ 1.57
BEST1-207ENST00000533521 GATMP50440 423 aa24.83■■□□□ 1.57
BEST1-207ENST00000533521 RAB27AP51159 221 aa24.83■■□□□ 1.57
BEST1-207ENST00000533521 ERMNQ8TAM6 284 aa24.83■■□□□ 1.57
BEST1-207ENST00000533521 TMEM143Q96AN5 459 aa24.83■■□□□ 1.57
BEST1-207ENST00000533521 CASD1Q96PB1 797 aa24.83■■□□□ 1.57
BEST1-207ENST00000533521 RNF19AQ9NV58 838 aa24.83■■□□□ 1.57
BEST1-207ENST00000533521 DBR1Q9UK59 544 aaKnown RBP24.83■■□□□ 1.57
BEST1-207ENST00000533521 STK24Q9Y6E0 443 aa24.83■■□□□ 1.57
BEST1-207ENST00000533521 XIRP2A4UGR9 3374 aa24.82■■□□□ 1.56
BEST1-207ENST00000533521 POTEMA6NI47 508 aa24.82■■□□□ 1.56
BEST1-207ENST00000533521 ZBTB39O15060 712 aa24.82■■□□□ 1.56
BEST1-207ENST00000533521 ITGB1P05556 798 aa24.82■■□□□ 1.56
BEST1-207ENST00000533521 FGFR1P11362 822 aa24.82■■□□□ 1.56
BEST1-207ENST00000533521 LAG3P18627 525 aa24.82■■□□□ 1.56
BEST1-207ENST00000533521 ATP2B1P20020 1258 aa24.82■■□□□ 1.56
BEST1-207ENST00000533521 RPA1P27694 616 aa24.82■■□□□ 1.56
BEST1-207ENST00000533521 FXR2P51116 673 aaKnown RBP eCLIP24.82■■□□□ 1.56
BEST1-207ENST00000533521 CAMK1Q14012 370 aa24.82■■□□□ 1.56
BEST1-207ENST00000533521 PDIA5Q14554 519 aa24.82■■□□□ 1.56
BEST1-207ENST00000533521 ZNF174Q15697 407 aa24.82■■□□□ 1.56
BEST1-207ENST00000533521 LEXMQ3ZCV2 418 aa24.82■■□□□ 1.56
BEST1-207ENST00000533521 TCEAL5Q5H9L2 206 aa24.82■■□□□ 1.56
BEST1-207ENST00000533521 KSR1Q8IVT5 923 aa24.82■■□□□ 1.56
BEST1-207ENST00000533521 C4orf32Q8N8J7 132 aa24.82■■□□□ 1.56
BEST1-207ENST00000533521 KLHL23Q8NBE8 558 aa24.82■■□□□ 1.56
BEST1-207ENST00000533521 ADAMTS19Q8TE59 1207 aa24.82■■□□□ 1.56
BEST1-207ENST00000533521 PABPC5Q96DU9 382 aaKnown RBP24.82■■□□□ 1.56
BEST1-207ENST00000533521 CWH43Q9H720 699 aa24.82■■□□□ 1.56
BEST1-207ENST00000533521 XPNPEP1Q9NQW7 623 aa24.82■■□□□ 1.56
BEST1-207ENST00000533521 AGPAT5Q9NUQ2 364 aa24.82■■□□□ 1.56
BEST1-207ENST00000533521 TYW1Q9NV66 732 aaKnown RBP24.82■■□□□ 1.56
BEST1-207ENST00000533521 SPTBN5Q9NRC6 3674 aaKnown RBP24.82■■□□□ 1.56
BEST1-207ENST00000533521 BDP1A6H8Y1 2624 aa24.81■■□□□ 1.56
BEST1-207ENST00000533521 LAD1O00515 517 aa24.81■■□□□ 1.56
BEST1-207ENST00000533521 CSDE1O75534 798 aaKnown RBP24.81■■□□□ 1.56
BEST1-207ENST00000533521 ATF7P17544 494 aaPredicted RBP24.81■■□□□ 1.56
BEST1-207ENST00000533521 FGFR4P22455 802 aa24.81■■□□□ 1.56
BEST1-207ENST00000533521 PHKA2P46019 1235 aa24.81■■□□□ 1.56
BEST1-207ENST00000533521 PUS10Q3MIT2 529 aaKnown RBP24.81■■□□□ 1.56
BEST1-207ENST00000533521 PDE12Q6L8Q7 609 aaKnown RBP24.81■■□□□ 1.56
BEST1-207ENST00000533521 CATSPER4Q7RTX7 472 aa24.81■■□□□ 1.56
BEST1-207ENST00000533521 CATSPER3Q86XQ3 398 aa24.81■■□□□ 1.56
BEST1-207ENST00000533521 ABI1Q8IZP0 508 aa24.81■■□□□ 1.56
BEST1-207ENST00000533521 LRRC43Q8N309 656 aa24.81■■□□□ 1.56
BEST1-207ENST00000533521 PPP2R3CQ969Q6 453 aa24.81■■□□□ 1.56
BEST1-207ENST00000533521 NACC1Q96RE7 527 aa24.81■■□□□ 1.56
BEST1-207ENST00000533521 NFKBIZQ9BYH8 718 aa24.81■■□□□ 1.56
BEST1-207ENST00000533521 LZTS1Q9Y250 596 aa24.81■■□□□ 1.56
BEST1-207ENST00000533521 ARL2P36404 184 aa24.8■■□□□ 1.56
BEST1-207ENST00000533521 TECP42680 631 aa24.8■■□□□ 1.56
BEST1-207ENST00000533521 TFDP1Q14186 410 aa24.8■■□□□ 1.56
BEST1-207ENST00000533521 CTC1Q2NKJ3 1217 aa24.8■■□□□ 1.56
BEST1-207ENST00000533521 MRPL9Q9BYD2 267 aaKnown RBP24.8■■□□□ 1.56
BEST1-207ENST00000533521 ALG13Q9NP73 1137 aaKnown RBP24.8■■□□□ 1.56
BEST1-207ENST00000533521 DAXXQ9UER7 740 aaPredicted RBP24.8■■□□□ 1.56
BEST1-207ENST00000533521 PLXNA4Q9HCM2 1894 aa24.79■■□□□ 1.56
BEST1-207ENST00000533521 SRGAP2CP0DJJ0 459 aa24.79■■□□□ 1.56
BEST1-207ENST00000533521 AXLP30530 894 aa24.79■■□□□ 1.56
BEST1-207ENST00000533521 TOB1P50616 345 aaPredicted RBP24.79■■□□□ 1.56
BEST1-207ENST00000533521 PTENP60484 403 aa24.79■■□□□ 1.56
BEST1-207ENST00000533521 PLCB3Q01970 1234 aa24.79■■□□□ 1.56
BEST1-207ENST00000533521 HAUS3Q68CZ6 603 aa24.79■■□□□ 1.56
BEST1-207ENST00000533521 TWF2Q6IBS0 349 aaKnown RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms