RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 ZNF564Q8TBZ8 553 aaPredicted RBP16.45■□□□□ 0.22
PCDHA3-202ENST00000532566 NLRP7Q8WX94 980 aa16.45■□□□□ 0.22
PCDHA3-202ENST00000532566 CFAP57Q96MR6 1250 aa16.45■□□□□ 0.22
PCDHA3-202ENST00000532566 SLC37A4O43826 429 aa16.45■□□□□ 0.22
PCDHA3-202ENST00000532566 PSMC4P43686 418 aa16.45■□□□□ 0.22
PCDHA3-202ENST00000532566 ADCY2Q08462 1091 aa16.45■□□□□ 0.22
PCDHA3-202ENST00000532566 NAA25Q14CX7 972 aa16.45■□□□□ 0.22
PCDHA3-202ENST00000532566 C6orf118Q5T5N4 469 aa16.45■□□□□ 0.22
PCDHA3-202ENST00000532566 ARHGEF18Q6ZSZ5 1173 aa16.45■□□□□ 0.22
PCDHA3-202ENST00000532566 L2HGDHQ9H9P8 463 aa16.45■□□□□ 0.22
PCDHA3-202ENST00000532566 STK38LQ9Y2H1 464 aa16.45■□□□□ 0.22
PCDHA3-202ENST00000532566 ZNF211Q13398 564 aaPredicted RBP16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 TMEM270Q6UE05 265 aa16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 APOBEC3FQ8IUX4 373 aaKnown RBP16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 FBXL13Q8NEE6 735 aa16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 MTRQ99707 1265 aa16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 NBPF3Q9H094 633 aa16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 RPAP3Q9H6T3 665 aaPredicted RBP16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 KCND2Q9NZV8 630 aa16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 ZNF70Q9UC06 446 aaPredicted RBP16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 HNRNPH2P55795 449 aaKnown RBP16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 ZNF394Q53GI3 561 aa16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 OR6B2Q6IFH4 312 aa16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 SDCCAG8Q86SQ7 713 aaPredicted RBP16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 NME8Q8N427 588 aa16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 PSPC1Q8WXF1 523 aaKnown RBP16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 TAF1DQ9H5J8 278 aaPredicted RBP16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 ZNF302Q9NR11 478 aa16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 FAM205AQ6ZU69 1335 aa16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 MON2Q7Z3U7 1717 aa16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 RGL2O15211 777 aa16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 YWHABP31946 246 aaKnown RBP16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 PCK1P35558 622 aa16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 MYO1EQ12965 1108 aa16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 KCTD17Q8N5Z5 321 aa16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 RPS6KC1Q96S38 1066 aa16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 C11orf70Q9BRQ4 267 aa16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 SLITRK6Q9H5Y7 841 aa16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 NOC2LQ9Y3T9 749 aaKnown RBP16.44■□□□□ 0.22
PCDHA3-202ENST00000532566 PSMD14O00487 310 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 ZNF185O15231 689 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 SLC12A2P55011 1212 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 GRB10Q13322 594 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 PDCLQ13371 301 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 ZKSCAN8Q15776 578 aaPredicted RBP16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 ENOSF1Q7L5Y1 443 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 EFCAB13Q8IY85 973 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 C7orf31Q8N865 590 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 SLC4A9Q96Q91 983 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 ZBTB12Q9Y330 459 aaPredicted RBP16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 C3P01024 1663 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 RSBN1LQ6PCB5 846 aaPredicted RBP16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 RAB3IL1Q8TBN0 382 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 TIPINQ9BVW5 301 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 NUB1Q9Y5A7 615 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 SYNJ2BP-COX16A0A087WUM0 186 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 MYBP10242 640 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 FMO5P49326 533 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 BASP1P80723 227 aaKnown RBP16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 ADCY1Q08828 1119 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 AFAP1L2Q8N4X5 818 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 NUP85Q9BW27 656 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 STK33Q9BYT3 514 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 NACA2Q9H009 215 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 COX16Q9P0S2 106 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 ACTN1P12814 892 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 TMED2Q15363 201 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 KCTD6Q8NC69 237 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 CDKL2Q92772 493 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 LRRC1Q9BTT6 524 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 POLR3FQ9H1D9 316 aaPredicted RBP16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 TBK1Q9UHD2 729 aa16.43■□□□□ 0.22
PCDHA3-202ENST00000532566 EXOC1LA0A1B0GW35 172 aa16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 ZBTB7AO95365 584 aa16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 ACSL3O95573 720 aa16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 KLK7P49862 253 aa16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 MRPS9P82933 396 aaKnown RBP16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 NFIAQ12857 509 aa16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 MORC4Q8TE76 937 aa16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 RBM41Q96IZ5 413 aaKnown RBP16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 PLAGL2Q9UPG8 496 aa16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 A0A087WUV0 522 aaPredicted RBP16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 TBXAS1P24557 533 aaPredicted RBP16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 EN1Q05925 392 aaPredicted RBP16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 CDKAL1Q5VV42 579 aa16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 STYK1Q6J9G0 422 aa16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 SNX25Q9H3E2 840 aa16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 SEPT10Q9P0V9 454 aa16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 APEX2Q9UBZ4 518 aa16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 PRPSAP2O60256 369 aa16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 CHRNA3P32297 505 aa16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 TSNAXIP1Q2TAA8 658 aa16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 TTI2Q6NXR4 508 aa16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 PASD1Q8IV76 773 aa16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 GPD1LQ8N335 351 aa16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 PPP1R16BQ96T49 567 aa16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 AGPAT1Q99943 283 aa16.42■□□□□ 0.22
PCDHA3-202ENST00000532566 TJP3O95049 919 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 SLC9A1P19634 815 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 SMC1BQ8NDV3 1235 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms