RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 PLEKHG4Q58EX7 1191 aa24.67■■□□□ 1.54
LRRK1-208ENST00000532029 ARSHQ5FYA8 562 aa24.67■■□□□ 1.54
LRRK1-208ENST00000532029 CNKSR3Q6P9H4 555 aa24.67■■□□□ 1.54
LRRK1-208ENST00000532029 CHRDL2Q6WN34 429 aa24.67■■□□□ 1.54
LRRK1-208ENST00000532029 ZNF365Q70YC5 407 aa24.67■■□□□ 1.54
LRRK1-208ENST00000532029 CEP57L1Q8IYX8 460 aa24.67■■□□□ 1.54
LRRK1-208ENST00000532029 OSBPL7Q9BZF2 842 aa24.67■■□□□ 1.54
LRRK1-208ENST00000532029 LRRC27Q9C0I9 530 aa24.67■■□□□ 1.54
LRRK1-208ENST00000532029 MAGEF1Q9HAY2 307 aa24.67■■□□□ 1.54
LRRK1-208ENST00000532029 HPSEQ9Y251 543 aa24.67■■□□□ 1.54
LRRK1-208ENST00000532029 NOC2LQ9Y3T9 749 aaKnown RBP24.67■■□□□ 1.54
LRRK1-208ENST00000532029 SCN5AQ14524 2016 aa24.66■■□□□ 1.54
LRRK1-208ENST00000532029 NPHP3-ACAD11A0A0J9YXS1 232 aa24.66■■□□□ 1.54
LRRK1-208ENST00000532029 FAM237AA0A1B0GTK4 181 aa24.66■■□□□ 1.54
LRRK1-208ENST00000532029 LRRIQ4A6NIV6 560 aa24.66■■□□□ 1.54
LRRK1-208ENST00000532029 CD52P31358 61 aa24.66■■□□□ 1.54
LRRK1-208ENST00000532029 BMP8BP34820 402 aa24.66■■□□□ 1.54
LRRK1-208ENST00000532029 NDUFA8P51970 172 aa24.66■■□□□ 1.54
LRRK1-208ENST00000532029 C16orf59Q7L2K0 433 aa24.66■■□□□ 1.54
LRRK1-208ENST00000532029 DBF4BQ8NFT6 615 aa24.66■■□□□ 1.54
LRRK1-208ENST00000532029 TMEM40Q8WWA1 233 aa24.66■■□□□ 1.54
LRRK1-208ENST00000532029 APBB2Q92870 758 aa24.66■■□□□ 1.54
LRRK1-208ENST00000532029 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.66■■□□□ 1.54
LRRK1-208ENST00000532029 TNMDQ9H2S6 317 aa24.66■■□□□ 1.54
LRRK1-208ENST00000532029 USP25Q9UHP3 1055 aa24.66■■□□□ 1.54
LRRK1-208ENST00000532029 ODF2LQ9ULJ1 636 aa24.66■■□□□ 1.54
LRRK1-208ENST00000532029 SIP14410 1827 aa24.65■■□□□ 1.54
LRRK1-208ENST00000532029 GPR182O15218 404 aa24.65■■□□□ 1.54
LRRK1-208ENST00000532029 TBCAO75347 108 aaKnown RBP24.65■■□□□ 1.54
LRRK1-208ENST00000532029 NAMPTP43490 491 aa24.65■■□□□ 1.54
LRRK1-208ENST00000532029 AMPD3Q01432 767 aa24.65■■□□□ 1.54
LRRK1-208ENST00000532029 CACNB1Q02641 598 aaPredicted RBP24.65■■□□□ 1.54
LRRK1-208ENST00000532029 POU5F1BQ06416 359 aa24.65■■□□□ 1.54
LRRK1-208ENST00000532029 NFX1Q12986 1120 aaKnown RBP24.65■■□□□ 1.54
LRRK1-208ENST00000532029 TMEM240Q5SV17 173 aa24.65■■□□□ 1.54
LRRK1-208ENST00000532029 SRGAP1Q7Z6B7 1085 aa24.65■■□□□ 1.54
LRRK1-208ENST00000532029 TMEM87AQ8NBN3 555 aa24.65■■□□□ 1.54
LRRK1-208ENST00000532029 VWCEQ96DN2 955 aa24.65■■□□□ 1.54
LRRK1-208ENST00000532029 GBP4Q96PP9 640 aa24.65■■□□□ 1.54
LRRK1-208ENST00000532029 REEP2Q9BRK0 252 aa24.65■■□□□ 1.54
LRRK1-208ENST00000532029 MTIF3Q9H2K0 278 aaKnown RBP24.65■■□□□ 1.54
LRRK1-208ENST00000532029 GOLPH3LQ9H4A5 285 aa24.65■■□□□ 1.54
LRRK1-208ENST00000532029 AGO3Q9H9G7 860 aaKnown RBP24.65■■□□□ 1.54
LRRK1-208ENST00000532029 PADI3Q9ULW8 664 aa24.65■■□□□ 1.54
LRRK1-208ENST00000532029 FAM13AO94988 1023 aa24.64■■□□□ 1.54
LRRK1-208ENST00000532029 SFPQP23246 707 aaKnown RBP eCLIP24.64■■□□□ 1.54
LRRK1-208ENST00000532029 PTENP60484 403 aa24.64■■□□□ 1.54
LRRK1-208ENST00000532029 MAPK7Q13164 816 aa24.64■■□□□ 1.54
LRRK1-208ENST00000532029 DMP1Q13316 513 aaPredicted RBP24.64■■□□□ 1.54
LRRK1-208ENST00000532029 GIT2Q14161 759 aa24.64■■□□□ 1.54
LRRK1-208ENST00000532029 IKBKEQ14164 716 aa24.64■■□□□ 1.54
LRRK1-208ENST00000532029 OTOP2Q7RTS6 562 aa24.64■■□□□ 1.54
LRRK1-208ENST00000532029 DYMQ7RTS9 669 aa24.64■■□□□ 1.54
LRRK1-208ENST00000532029 FAM228AQ86W67 206 aa24.64■■□□□ 1.54
LRRK1-208ENST00000532029 ZBTB8OSQ8IWT0 167 aa24.64■■□□□ 1.54
LRRK1-208ENST00000532029 DAW1Q8N136 415 aa24.64■■□□□ 1.54
LRRK1-208ENST00000532029 DEPTORQ8TB45 409 aa24.64■■□□□ 1.54
LRRK1-208ENST00000532029 BSNDQ8WZ55 320 aa24.64■■□□□ 1.54
LRRK1-208ENST00000532029 C17orf75Q9HAS0 396 aa24.64■■□□□ 1.54
LRRK1-208ENST00000532029 IFT122Q9HBG6 1241 aa24.64■■□□□ 1.54
LRRK1-208ENST00000532029 KBTBD4Q9NVX7 518 aa24.64■■□□□ 1.54
LRRK1-208ENST00000532029 SERTAD1Q9UHV2 236 aa24.64■■□□□ 1.54
LRRK1-208ENST00000532029 MYMKA6NI61 221 aa24.63■■□□□ 1.53
LRRK1-208ENST00000532029 SFI1A8K8P3 1242 aa24.63■■□□□ 1.53
LRRK1-208ENST00000532029 SLFN14P0C7P3 912 aa24.63■■□□□ 1.53
LRRK1-208ENST00000532029 PEX3P56589 373 aa24.63■■□□□ 1.53
LRRK1-208ENST00000532029 CLEC17AQ6ZS10 378 aa24.63■■□□□ 1.53
LRRK1-208ENST00000532029 DDX12PQ92771 950 aa24.63■■□□□ 1.53
LRRK1-208ENST00000532029 STAMQ92783 540 aa24.63■■□□□ 1.53
LRRK1-208ENST00000532029 C2orf40Q9H1Z8 148 aa24.63■■□□□ 1.53
LRRK1-208ENST00000532029 ZHX3Q9H4I2 956 aa24.63■■□□□ 1.53
LRRK1-208ENST00000532029 ERVK-5Q9HDB9 667 aa24.63■■□□□ 1.53
LRRK1-208ENST00000532029 KCNG1Q9UIX4 513 aa24.63■■□□□ 1.53
LRRK1-208ENST00000532029 ST3GAL5Q9UNP4 418 aa24.63■■□□□ 1.53
LRRK1-208ENST00000532029 CCDC169A6NNP5 214 aa24.62■■□□□ 1.53
LRRK1-208ENST00000532029 ZBBXA8MT70 800 aa24.62■■□□□ 1.53
LRRK1-208ENST00000532029 CSDE1O75534 798 aaKnown RBP24.62■■□□□ 1.53
LRRK1-208ENST00000532029 BAIAP3O94812 1187 aa24.62■■□□□ 1.53
LRRK1-208ENST00000532029 PLS3P13797 630 aa24.62■■□□□ 1.53
LRRK1-208ENST00000532029 C9orf50Q5SZB4 431 aa24.62■■□□□ 1.53
LRRK1-208ENST00000532029 CATSPER4Q7RTX7 472 aa24.62■■□□□ 1.53
LRRK1-208ENST00000532029 IFNLR1Q8IU57 520 aaPredicted RBP24.62■■□□□ 1.53
LRRK1-208ENST00000532029 HERVK_113Q902F9 699 aa24.62■■□□□ 1.53
LRRK1-208ENST00000532029 NFKBIZQ9BYH8 718 aa24.62■■□□□ 1.53
LRRK1-208ENST00000532029 LARSQ9P2J5 1176 aaKnown RBP24.62■■□□□ 1.53
LRRK1-208ENST00000532029 ABHD14A-ACY1A0A1B0GW23 586 aa24.61■■□□□ 1.53
LRRK1-208ENST00000532029 INO80B-WBP1J3KQ70 363 aa24.61■■□□□ 1.53
LRRK1-208ENST00000532029 ACTN4O43707 911 aaKnown RBP24.61■■□□□ 1.53
LRRK1-208ENST00000532029 EFCAB14O75071 495 aa24.61■■□□□ 1.53
LRRK1-208ENST00000532029 FGFR4P22455 802 aa24.61■■□□□ 1.53
LRRK1-208ENST00000532029 SMTNP53814 917 aa24.61■■□□□ 1.53
LRRK1-208ENST00000532029 SHHQ15465 462 aa24.61■■□□□ 1.53
LRRK1-208ENST00000532029 LONRF3Q496Y0 759 aa24.61■■□□□ 1.53
LRRK1-208ENST00000532029 FAM43BQ6ZT52 329 aaPredicted RBP24.61■■□□□ 1.53
LRRK1-208ENST00000532029 RNPC3Q96LT9 517 aaKnown RBP24.61■■□□□ 1.53
LRRK1-208ENST00000532029 FTHL17Q9BXU8 183 aa24.61■■□□□ 1.53
LRRK1-208ENST00000532029 PARVGQ9HBI0 331 aa24.61■■□□□ 1.53
LRRK1-208ENST00000532029 KMT5AQ9NQR1 393 aa24.61■■□□□ 1.53
LRRK1-208ENST00000532029 COLQQ9Y215 455 aaPredicted RBP24.61■■□□□ 1.53
LRRK1-208ENST00000532029 GADD45BO75293 160 aaPredicted RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms