RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 SWSAP1Q6NVH7 229 aa5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 KLHDC10Q6PID8 442 aa5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 APOA5Q6Q788 366 aa5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 KIAA1211Q6ZU35 1233 aa5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 FASTKD5Q7L8L6 764 aaKnown RBP5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 TBC1D1Q86TI0 1168 aaPredicted RBP5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 FBXO11Q86XK2 927 aa5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 SIRT2Q8IXJ6 389 aa5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 NKAIN3Q8N8D7 197 aa5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 PCYOX1LQ8NBM8 494 aa5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 ANKS1AQ92625 1134 aa5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 FATE1Q969F0 183 aa5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 HDAC10Q969S8 669 aa5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 EAF2Q96CJ1 260 aaPredicted RBP5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 MTFMTQ96DP5 389 aaKnown RBP5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 PAWRQ96IZ0 340 aaKnown RBP5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 CHAMP1Q96JM3 812 aa5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 PTCHD1Q96NR3 888 aa5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 KCNJ15Q99712 375 aa5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 C22orf23Q9BZE7 217 aa5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 PDGFDQ9GZP0 370 aaPredicted RBP5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 MS4A5Q9H3V2 200 aa5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 EPB41L1Q9H4G0 881 aa5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 PPARGC1AQ9UBK2 798 aaKnown RBP5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 SNX13Q9Y5W8 968 aa5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 ATP23Q9Y6H3 246 aa5.08□□□□□ -1.6
AC055878.1-201ENST00000531858 A6NCN8 305 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 POM121BA6NF01 834 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 CCDC154A6NI56 674 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 B4E171 279 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 MEIS1O00470 390 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 NCK2O43639 380 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 PLA2G6O60733 806 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 ARIH2O95376 493 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 HSP90AB1P08238 724 aaKnown RBP5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 GSTM1P09488 218 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 ZNF865P0CJ78 1059 aaPredicted RBP5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 SRFP11831 508 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 NID1P14543 1247 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 RRM1P23921 792 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 BCL6P41182 706 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 TSPAN7P41732 249 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 CEBPAP49715 358 aaPredicted RBP5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 FXR1P51114 621 aaKnown RBP eCLIP5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 DAG1Q14118 895 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 SPIDRQ14159 915 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 FGL2Q14314 439 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 NBPF8Q3BBV2 869 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 ZACNQ401N2 412 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 CT83Q5H943 113 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 PITRM1Q5JRX3 1037 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 RTP2Q5QGT7 225 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 ACAD11Q709F0 780 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 CHSY3Q70JA7 882 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 TTC7BQ86TV6 843 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 GALNT15Q8N3T1 639 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 C7orf31Q8N865 590 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 TCTN2Q96GX1 697 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 SUCLG2Q96I99 432 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 Q96M66 194 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 STK33Q9BYT3 514 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 TRIT1Q9H3H1 467 aaKnown RBP5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 JMJD4Q9H9V9 463 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 SMC4Q9NTJ3 1288 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 CEP83Q9Y592 693 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 X6R8D5 127 aa5.07□□□□□ -1.6
AC055878.1-201ENST00000531858 RPGRIP1LQ68CZ1 1315 aa5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 ST20-MTHFSA0A0A6YYL1 179 aa5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 WTIPA6NIX2 430 aaPredicted RBP5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 EIF3FO00303 357 aaPredicted RBP5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 SYT5O00445 386 aa5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 KRIT1O00522 736 aa5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 SCDO00767 359 aa5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 DGKIO75912 1065 aa5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 EOMESO95936 686 aa5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 CD4P01730 458 aa5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 XBP1P17861 261 aa5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 HSPA7P48741 367 aa5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 ALDH9A1P49189 494 aa5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 PCBP3P57721 371 aaKnown RBP5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 RAB1AP62820 205 aa5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 MALLQ13021 153 aa5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 CDC37Q16543 378 aaPredicted RBP5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 FBXO47Q5MNV8 452 aa5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 HIBCHQ6NVY1 386 aaPredicted RBP5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 NEK10Q6ZWH5 1172 aa5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 RIOX2Q8IUF8 465 aa5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 SIAH1Q8IUQ4 282 aa5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 DMRTC2Q8IXT2 367 aaPredicted RBP5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 RNF152Q8N8N0 203 aa5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 UHMK1Q8TAS1 419 aaKnown RBP5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 RTF1Q92541 710 aaKnown RBP5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 EZH1Q92800 747 aaPredicted RBP5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 RGMAQ96B86 450 aa5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 SLC2A13Q96QE2 648 aa5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 NUDT16L1Q9BRJ7 211 aaKnown RBP5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 ACE2Q9BYF1 805 aaPredicted RBP5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 MRPL18Q9H0U6 180 aaKnown RBP5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 ATP6V0A4Q9HBG4 840 aa5.06□□□□□ -1.6
AC055878.1-201ENST00000531858 ZNF287Q9HBT7 754 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms