RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 ZNF558Q96NG5 402 aa14.96□□□□□ -0.01
AMBRA1-210ENST00000531542 LARP6Q9BRS8 491 aaKnown RBP14.96□□□□□ -0.01
AMBRA1-210ENST00000531542 MRPL9Q9BYD2 267 aaKnown RBP14.96□□□□□ -0.01
AMBRA1-210ENST00000531542 SEPT9Q9UHD8 586 aaPredicted RBP14.96□□□□□ -0.01
AMBRA1-210ENST00000531542 KCNJ14Q9UNX9 436 aa14.96□□□□□ -0.01
AMBRA1-210ENST00000531542 ATG2AQ2TAZ0 1938 aa14.96□□□□□ -0.02
AMBRA1-210ENST00000531542 DDX11L8A8MPP1 907 aa14.95□□□□□ -0.02
AMBRA1-210ENST00000531542 LOC730098B7Z3J9 87 aa14.95□□□□□ -0.02
AMBRA1-210ENST00000531542 EML1O00423 815 aa14.95□□□□□ -0.02
AMBRA1-210ENST00000531542 SLC37A4O43826 429 aa14.95□□□□□ -0.02
AMBRA1-210ENST00000531542 P4HBP07237 508 aaKnown RBP14.95□□□□□ -0.02
AMBRA1-210ENST00000531542 CLUL1Q15846 466 aa14.95□□□□□ -0.02
AMBRA1-210ENST00000531542 LETM2Q2VYF4 491 aa14.95□□□□□ -0.02
AMBRA1-210ENST00000531542 MTERF2Q49AM1 385 aa14.95□□□□□ -0.02
AMBRA1-210ENST00000531542 CLLU1OSQ5K130 101 aa14.95□□□□□ -0.02
AMBRA1-210ENST00000531542 ERICH6BQ5W0A0 696 aa14.95□□□□□ -0.02
AMBRA1-210ENST00000531542 RBM23Q86U06 439 aaKnown RBP14.95□□□□□ -0.02
AMBRA1-210ENST00000531542 SCLT1Q96NL6 688 aa14.95□□□□□ -0.02
AMBRA1-210ENST00000531542 KCNH6Q9H252 994 aa14.95□□□□□ -0.02
AMBRA1-210ENST00000531542 CYP26B1Q9NR63 512 aa14.95□□□□□ -0.02
AMBRA1-210ENST00000531542 SPG21Q9NZD8 308 aa14.95□□□□□ -0.02
AMBRA1-210ENST00000531542 SUCLA2Q9P2R7 463 aaPredicted RBP14.95□□□□□ -0.02
AMBRA1-210ENST00000531542 HCSTQ9UBK5 93 aa14.95□□□□□ -0.02
AMBRA1-210ENST00000531542 TPCN1Q9ULQ1 816 aa14.95□□□□□ -0.02
AMBRA1-210ENST00000531542 FNDC1Q4ZHG4 1894 aaPredicted RBP14.95□□□□□ -0.02
AMBRA1-210ENST00000531542 A0A087WZ62 844 aa14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 FAM86C2PA6NEL3 165 aa14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 GAS2O43903 313 aaKnown RBP14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 EIF5BO60841 1220 aaKnown RBP14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 SRGAP2BP0DMP2 458 aa14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 IBSPP21815 317 aaPredicted RBP14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 PHKA2P46019 1235 aa14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 RAB27AP51159 221 aa14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 EPHA7Q15375 998 aa14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 RNF135Q8IUD6 432 aa14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 C4orf19Q8IY42 314 aa14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 SLFN12Q8IYM2 578 aa14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 SLC39A11Q8N1S5 342 aa14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 SLC7A3Q8WY07 619 aa14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 SUSD6Q92537 303 aa14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 HAS1Q92839 578 aa14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 TCF25Q9BQ70 676 aa14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 FDXACB1Q9BRP7 624 aaPredicted RBP14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 DHX33Q9H6R0 707 aaKnown RBP14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 BARX2Q9UMQ3 279 aaPredicted RBP14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 PCDHGC5Q9Y5F6 944 aa14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 KIAA1671Q9BY89 1806 aa14.94□□□□□ -0.02
AMBRA1-210ENST00000531542 TMEM150BA6NC51 233 aa14.93□□□□□ -0.02
AMBRA1-210ENST00000531542 CTDNEP1O95476 244 aa14.93□□□□□ -0.02
AMBRA1-210ENST00000531542 NEFLP07196 543 aa14.93□□□□□ -0.02
AMBRA1-210ENST00000531542 HOXB8P17481 243 aaPredicted RBP14.93□□□□□ -0.02
AMBRA1-210ENST00000531542 RFC5P40937 340 aa14.93□□□□□ -0.02
AMBRA1-210ENST00000531542 ALDH7A1P49419 539 aaKnown RBP14.93□□□□□ -0.02
AMBRA1-210ENST00000531542 PCBP1Q15365 356 aaKnown RBP eCLIP14.93□□□□□ -0.02
AMBRA1-210ENST00000531542 RHPN2Q8IUC4 686 aa14.93□□□□□ -0.02
AMBRA1-210ENST00000531542 MRPL43Q8N983 215 aaKnown RBP14.93□□□□□ -0.02
AMBRA1-210ENST00000531542 VN1R2Q8NFZ6 395 aa14.93□□□□□ -0.02
AMBRA1-210ENST00000531542 ZNF668Q96K58 619 aaPredicted RBP14.93□□□□□ -0.02
AMBRA1-210ENST00000531542 PHF7Q9BWX1 381 aaPredicted RBP14.93□□□□□ -0.02
AMBRA1-210ENST00000531542 S1PR5Q9H228 398 aa14.93□□□□□ -0.02
AMBRA1-210ENST00000531542 IFT122Q9HBG6 1241 aa14.93□□□□□ -0.02
AMBRA1-210ENST00000531542 USP15Q9Y4E8 981 aaPredicted RBP14.93□□□□□ -0.02
AMBRA1-210ENST00000531542 PIEZO1Q92508 2521 aa14.92□□□□□ -0.02
AMBRA1-210ENST00000531542 PER2O15055 1255 aa14.92□□□□□ -0.02
AMBRA1-210ENST00000531542 ASAP2O43150 1006 aa14.92□□□□□ -0.02
AMBRA1-210ENST00000531542 CCNT1O60563 726 aaKnown RBP14.92□□□□□ -0.02
AMBRA1-210ENST00000531542 CSPG5O95196 566 aa14.92□□□□□ -0.02
AMBRA1-210ENST00000531542 FDPSP14324 419 aaKnown RBP14.92□□□□□ -0.02
AMBRA1-210ENST00000531542 FGFR4P22455 802 aa14.92□□□□□ -0.02
AMBRA1-210ENST00000531542 SPIRE1Q08AE8 756 aa14.92□□□□□ -0.02
AMBRA1-210ENST00000531542 PIK3AP1Q6ZUJ8 805 aa14.92□□□□□ -0.02
AMBRA1-210ENST00000531542 OTUD6AQ7L8S5 288 aa14.92□□□□□ -0.02
AMBRA1-210ENST00000531542 SRGAP1Q7Z6B7 1085 aa14.92□□□□□ -0.02
AMBRA1-210ENST00000531542 OXER1Q8TDS5 423 aa14.92□□□□□ -0.02
AMBRA1-210ENST00000531542 TNFRSF25Q93038 417 aa14.92□□□□□ -0.02
AMBRA1-210ENST00000531542 ORC3Q9UBD5 711 aaPredicted RBP14.92□□□□□ -0.02
AMBRA1-210ENST00000531542 STK39Q9UEW8 545 aa14.92□□□□□ -0.02
AMBRA1-210ENST00000531542 IRAK3Q9Y616 596 aa14.92□□□□□ -0.02
AMBRA1-210ENST00000531542 CSDE1O75534 798 aaKnown RBP14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 LYPLA2O95372 231 aa14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 HOXD11P31277 338 aaPredicted RBP14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 POLGP54098 1239 aaPredicted RBP14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 AK2P54819 239 aa14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 POU5F1BQ06416 359 aa14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 GIT2Q14161 759 aa14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 SMC1AQ14683 1233 aaKnown RBP14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 BMS1Q14692 1282 aaKnown RBP14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 TWF2Q6IBS0 349 aaKnown RBP14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 ANKRD54Q6NXT1 300 aa14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 TMC7Q7Z402 723 aa14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 BMP8AQ7Z5Y6 402 aa14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 MRPL10Q7Z7H8 261 aaKnown RBP14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 RNF169Q8NCN4 708 aa14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 HELQQ8TDG4 1101 aa14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 TCP11Q8WWU5 503 aa14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 PSPC1Q8WXF1 523 aaKnown RBP14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 EDAQ92838 391 aa14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 PGBD4Q96DM1 585 aa14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 CEP170P1Q96L14 293 aa14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 SH2D3AQ9BRG2 576 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms