RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 PABPC5Q96DU9 382 aaKnown RBP13.48□□□□□ -0.25
COPB1-206ENST00000529210 UHRF1Q96T88 793 aaPredicted RBP13.48□□□□□ -0.25
COPB1-206ENST00000529210 SH2D3AQ9BRG2 576 aa13.48□□□□□ -0.25
COPB1-206ENST00000529210 FDXACB1Q9BRP7 624 aaPredicted RBP13.48□□□□□ -0.25
COPB1-206ENST00000529210 CWH43Q9H720 699 aa13.48□□□□□ -0.25
COPB1-206ENST00000529210 IFT122Q9HBG6 1241 aa13.48□□□□□ -0.25
COPB1-206ENST00000529210 ANKEF1Q9NU02 776 aa13.48□□□□□ -0.25
COPB1-206ENST00000529210 COL4A3BPQ9Y5P4 624 aa13.48□□□□□ -0.25
COPB1-206ENST00000529210 MYO7AQ13402 2215 aa13.48□□□□□ -0.25
COPB1-206ENST00000529210 PLXNA4Q9HCM2 1894 aa13.47□□□□□ -0.25
COPB1-206ENST00000529210 TNFRSF10AO00220 468 aa13.47□□□□□ -0.25
COPB1-206ENST00000529210 ZNF623O75123 536 aa13.47□□□□□ -0.25
COPB1-206ENST00000529210 ITGB1P05556 798 aa13.47□□□□□ -0.25
COPB1-206ENST00000529210 ATF7P17544 494 aaPredicted RBP13.47□□□□□ -0.25
COPB1-206ENST00000529210 U2AF2P26368 475 aaKnown RBP eCLIP13.47□□□□□ -0.257e-14■■□□□ 13.2
COPB1-206ENST00000529210 GATMP50440 423 aa13.47□□□□□ -0.25
COPB1-206ENST00000529210 KCNQ1P51787 676 aa13.47□□□□□ -0.25
COPB1-206ENST00000529210 POLGP54098 1239 aaPredicted RBP13.47□□□□□ -0.25
COPB1-206ENST00000529210 TCEAL5Q5H9L2 206 aa13.47□□□□□ -0.25
COPB1-206ENST00000529210 SRGAP1Q7Z6B7 1085 aa13.47□□□□□ -0.25
COPB1-206ENST00000529210 IFNLR1Q8IU57 520 aaPredicted RBP13.47□□□□□ -0.25
COPB1-206ENST00000529210 RHPN2Q8IUC4 686 aa13.47□□□□□ -0.25
COPB1-206ENST00000529210 ZNF579Q8NAF0 562 aaKnown RBP13.47□□□□□ -0.25
COPB1-206ENST00000529210 TCP11Q8WWU5 503 aa13.47□□□□□ -0.25
COPB1-206ENST00000529210 PSPC1Q8WXF1 523 aaKnown RBP13.47□□□□□ -0.25
COPB1-206ENST00000529210 SCLT1Q96NL6 688 aa13.47□□□□□ -0.25
COPB1-206ENST00000529210 CASD1Q96PB1 797 aa13.47□□□□□ -0.25
COPB1-206ENST00000529210 TMEM60Q9H2L4 133 aa13.47□□□□□ -0.25
COPB1-206ENST00000529210 AAASQ9NRG9 546 aa13.47□□□□□ -0.25
COPB1-206ENST00000529210 TCF20Q9UGU0 1960 aaKnown RBP13.47□□□□□ -0.25
COPB1-206ENST00000529210 TBKBP1A7MCY6 615 aa13.46□□□□□ -0.25
COPB1-206ENST00000529210 ST18O60284 1047 aa13.46□□□□□ -0.25
COPB1-206ENST00000529210 DGAT1O75907 488 aa13.46□□□□□ -0.25
COPB1-206ENST00000529210 SKIP12755 728 aa13.46□□□□□ -0.25
COPB1-206ENST00000529210 LAG3P18627 525 aa13.46□□□□□ -0.25
COPB1-206ENST00000529210 MUTP22033 750 aa13.46□□□□□ -0.25
COPB1-206ENST00000529210 CYP4A11Q02928 519 aa13.46□□□□□ -0.25
COPB1-206ENST00000529210 CTTNQ14247 550 aaKnown RBP13.46□□□□□ -0.25
COPB1-206ENST00000529210 EMC2Q15006 297 aa13.46□□□□□ -0.25
COPB1-206ENST00000529210 PUS10Q3MIT2 529 aaKnown RBP13.46□□□□□ -0.25
COPB1-206ENST00000529210 PAN2Q504Q3 1202 aaKnown RBP13.46□□□□□ -0.25
COPB1-206ENST00000529210 FERMT3Q86UX7 667 aa13.46□□□□□ -0.25
COPB1-206ENST00000529210 NOSTRINQ8IVI9 506 aa13.46□□□□□ -0.25
COPB1-206ENST00000529210 FAM184AQ8NB25 1140 aa13.46□□□□□ -0.25
COPB1-206ENST00000529210 KLHL23Q8NBE8 558 aa13.46□□□□□ -0.25
COPB1-206ENST00000529210 ZNF668Q96K58 619 aaPredicted RBP13.46□□□□□ -0.25
COPB1-206ENST00000529210 TUFT1Q9NNX1 390 aa13.46□□□□□ -0.25
COPB1-206ENST00000529210 XPNPEP1Q9NQW7 623 aa13.46□□□□□ -0.25
COPB1-206ENST00000529210 TYW1Q9NV66 732 aaKnown RBP13.46□□□□□ -0.25
COPB1-206ENST00000529210 LZTS1Q9Y250 596 aa13.46□□□□□ -0.25
COPB1-206ENST00000529210 PCDHB12Q9Y5F1 795 aa13.46□□□□□ -0.25
COPB1-206ENST00000529210 CARNS1A5YM72 827 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 ZBTB39O15060 712 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 SPATA31C1P0DKV0 1188 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 FGFR1P11362 822 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 DNAJB1P25685 340 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 MCM7P33993 719 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 TXKP42681 527 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 PHKA2P46019 1235 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 MCM2P49736 904 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 RARRES1P49788 294 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 RAB27AP51159 221 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 PLCB3Q01970 1234 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 GUCY1B3Q02153 619 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 LAMTOR4Q0VGL1 99 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 MXD4Q14582 209 aaPredicted RBP13.45□□□□□ -0.26
COPB1-206ENST00000529210 XKR9Q5GH70 373 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 TPH2Q8IWU9 490 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 LRRC43Q8N309 656 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 COLGALT1Q8NBJ5 622 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.45□□□□□ -0.26
COPB1-206ENST00000529210 POF1BQ8WVV4 589 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 PRPF31Q8WWY3 499 aaKnown RBP13.45□□□□□ -0.26
COPB1-206ENST00000529210 PPP2R3CQ969Q6 453 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 MTRQ99707 1265 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 POLR3CQ9BUI4 534 aaPredicted RBP13.45□□□□□ -0.26
COPB1-206ENST00000529210 NFKBIZQ9BYH8 718 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 UPF2Q9HAU5 1272 aaKnown RBP13.45□□□□□ -0.26
COPB1-206ENST00000529210 ALG13Q9NP73 1137 aaKnown RBP13.45□□□□□ -0.26
COPB1-206ENST00000529210 AGPAT5Q9NUQ2 364 aa13.45□□□□□ -0.26
COPB1-206ENST00000529210 POTEMA6NI47 508 aa13.44□□□□□ -0.26
COPB1-206ENST00000529210 CSDE1O75534 798 aaKnown RBP13.44□□□□□ -0.26
COPB1-206ENST00000529210 OR52Z1P0C646 297 aa13.44□□□□□ -0.26
COPB1-206ENST00000529210 FGFR4P22455 802 aa13.44□□□□□ -0.26
COPB1-206ENST00000529210 RPA1P27694 616 aa13.44□□□□□ -0.26
COPB1-206ENST00000529210 PPM1AP35813 382 aa13.44□□□□□ -0.26
COPB1-206ENST00000529210 LTBRP36941 435 aa13.44□□□□□ -0.26
COPB1-206ENST00000529210 FOSBP53539 338 aa13.44□□□□□ -0.26
COPB1-206ENST00000529210 HYAL1Q12794 435 aa13.44□□□□□ -0.26
COPB1-206ENST00000529210 CLLU1OSQ5K130 101 aa13.44□□□□□ -0.26
COPB1-206ENST00000529210 PDE12Q6L8Q7 609 aaKnown RBP13.44□□□□□ -0.26
COPB1-206ENST00000529210 LRRC55Q6ZSA7 311 aa13.44□□□□□ -0.26
COPB1-206ENST00000529210 KSR1Q8IVT5 923 aa13.44□□□□□ -0.26
COPB1-206ENST00000529210 C4orf32Q8N8J7 132 aa13.44□□□□□ -0.26
COPB1-206ENST00000529210 TMEM143Q96AN5 459 aa13.44□□□□□ -0.26
COPB1-206ENST00000529210 NLRP4Q96MN2 994 aa13.44□□□□□ -0.26
COPB1-206ENST00000529210 TBC1D32Q96NH3 1257 aa13.44□□□□□ -0.26
COPB1-206ENST00000529210 MRPL9Q9BYD2 267 aaKnown RBP13.44□□□□□ -0.26
COPB1-206ENST00000529210 FAM105AQ9NUU6 356 aa13.44□□□□□ -0.26
COPB1-206ENST00000529210 DBR1Q9UK59 544 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms