RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 CEP89Q96ST8 783 aa10.73□□□□□ -0.69
CHD7-208ENST00000528280 KIF2CQ99661 725 aa10.73□□□□□ -0.69
CHD7-208ENST00000528280 HSD17B14Q9BPX1 270 aa10.73□□□□□ -0.69
CHD7-208ENST00000528280 EIF2AK1Q9BQI3 630 aaKnown RBP10.73□□□□□ -0.69
CHD7-208ENST00000528280 LXNQ9BS40 222 aa10.73□□□□□ -0.69
CHD7-208ENST00000528280 TRAIPQ9BWF2 469 aa10.73□□□□□ -0.69
CHD7-208ENST00000528280 NSUN3Q9H649 340 aaKnown RBP10.73□□□□□ -0.69
CHD7-208ENST00000528280 RC3H2Q9HBD1 1191 aaKnown RBP10.73□□□□□ -0.69
CHD7-208ENST00000528280 CD320Q9NPF0 282 aa10.73□□□□□ -0.69
CHD7-208ENST00000528280 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.72□□□□□ -0.69
CHD7-208ENST00000528280 MUTP22033 750 aa10.72□□□□□ -0.69
CHD7-208ENST00000528280 POU5F1BQ06416 359 aa10.72□□□□□ -0.69
CHD7-208ENST00000528280 SPIRE1Q08AE8 756 aa10.72□□□□□ -0.69
CHD7-208ENST00000528280 SPRED2Q7Z698 418 aa10.72□□□□□ -0.69
CHD7-208ENST00000528280 DYDC2Q96IM9 177 aa10.72□□□□□ -0.69
CHD7-208ENST00000528280 FBXL18Q96ME1 805 aa10.72□□□□□ -0.69
CHD7-208ENST00000528280 CCDC43Q96MW1 224 aaKnown RBP10.72□□□□□ -0.69
CHD7-208ENST00000528280 PPP1R16BQ96T49 567 aa10.72□□□□□ -0.69
CHD7-208ENST00000528280 TMEM117Q9H0C3 514 aa10.72□□□□□ -0.69
CHD7-208ENST00000528280 DHX33Q9H6R0 707 aaKnown RBP10.72□□□□□ -0.69
CHD7-208ENST00000528280 TUFT1Q9NNX1 390 aa10.72□□□□□ -0.69
CHD7-208ENST00000528280 RGL1Q9NZL6 768 aa10.72□□□□□ -0.69
CHD7-208ENST00000528280 PUF60Q9UHX1 559 aaKnown RBP10.72□□□□□ -0.69
CHD7-208ENST00000528280 PLAGL2Q9UPG8 496 aa10.72□□□□□ -0.69
CHD7-208ENST00000528280 FAM50BQ9Y247 325 aa10.72□□□□□ -0.69
CHD7-208ENST00000528280 A0A087WZ62 844 aa10.71□□□□□ -0.69
CHD7-208ENST00000528280 FSD2A1L4K1 749 aa10.71□□□□□ -0.69
CHD7-208ENST00000528280 TBKBP1A7MCY6 615 aa10.71□□□□□ -0.69
CHD7-208ENST00000528280 MGEA5O60502 916 aa10.71□□□□□ -0.69
CHD7-208ENST00000528280 DGAT1O75907 488 aa10.71□□□□□ -0.69
CHD7-208ENST00000528280 SIP14410 1827 aa10.71□□□□□ -0.69
CHD7-208ENST00000528280 U2AF2P26368 475 aaKnown RBP eCLIP10.71□□□□□ -0.69
CHD7-208ENST00000528280 MCM7P33993 719 aa10.71□□□□□ -0.69
CHD7-208ENST00000528280 RAB27AP51159 221 aa10.71□□□□□ -0.69
CHD7-208ENST00000528280 NPEPPSP55786 919 aa10.71□□□□□ -0.69
CHD7-208ENST00000528280 GUCY1B3Q02153 619 aa10.71□□□□□ -0.69
CHD7-208ENST00000528280 KRT17Q04695 432 aa10.71□□□□□ -0.69
CHD7-208ENST00000528280 TFDP1Q14186 410 aa10.71□□□□□ -0.69
CHD7-208ENST00000528280 CTTNQ14247 550 aaKnown RBP10.71□□□□□ -0.69
CHD7-208ENST00000528280 PDIA5Q14554 519 aa10.71□□□□□ -0.69
CHD7-208ENST00000528280 BMS1Q14692 1282 aaKnown RBP10.71□□□□□ -0.69
CHD7-208ENST00000528280 WDR81Q562E7 1941 aa10.71□□□□□ -0.69
CHD7-208ENST00000528280 ECHDC2Q86YB7 292 aa10.71□□□□□ -0.69
CHD7-208ENST00000528280 NOSTRINQ8IVI9 506 aa10.71□□□□□ -0.69
CHD7-208ENST00000528280 PRPF31Q8WWY3 499 aaKnown RBP10.71□□□□□ -0.69
CHD7-208ENST00000528280 PGBD4Q96DM1 585 aa10.71□□□□□ -0.69
CHD7-208ENST00000528280 NACC1Q96RE7 527 aa10.71□□□□□ -0.69
CHD7-208ENST00000528280 MTRQ99707 1265 aa10.71□□□□□ -0.69
CHD7-208ENST00000528280 FDXACB1Q9BRP7 624 aaPredicted RBP10.71□□□□□ -0.69
CHD7-208ENST00000528280 RAB34Q9BZG1 259 aa10.71□□□□□ -0.69
CHD7-208ENST00000528280 COL4A3BPQ9Y5P4 624 aa10.71□□□□□ -0.69
CHD7-208ENST00000528280 MRPL42Q9Y6G3 142 aaKnown RBP10.71□□□□□ -0.69
CHD7-208ENST00000528280 FAM205CA6NFA0 338 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 LAD1O00515 517 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 DTNBO60941 627 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 ZNF623O75123 536 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 SRGAP2CP0DJJ0 459 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 LAG3P18627 525 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 ATP2B1P20020 1258 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 AXLP30530 894 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 FOSBP53539 338 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 FOXK2Q01167 660 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 CYP4A11Q02928 519 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 LAMTOR4Q0VGL1 99 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 ST3GAL1Q11201 340 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 LEXMQ3ZCV2 418 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 PAN2Q504Q3 1202 aaKnown RBP10.7□□□□□ -0.7
CHD7-208ENST00000528280 FAM102BQ5T8I3 360 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 PLA2G4FQ68DD2 849 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 CATSPER4Q7RTX7 472 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 KLHL23Q8NBE8 558 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 CNNM3Q8NE01 707 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 SPPL3Q8TCT6 385 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 PABPC5Q96DU9 382 aaKnown RBP10.7□□□□□ -0.7
CHD7-208ENST00000528280 NLRP4Q96MN2 994 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 POLR3CQ9BUI4 534 aaPredicted RBP10.7□□□□□ -0.7
CHD7-208ENST00000528280 MRPL9Q9BYD2 267 aaKnown RBP10.7□□□□□ -0.7
CHD7-208ENST00000528280 UBE2ZQ9H832 354 aaPredicted RBP10.7□□□□□ -0.7
CHD7-208ENST00000528280 TYW1Q9NV66 732 aaKnown RBP10.7□□□□□ -0.7
CHD7-208ENST00000528280 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.7□□□□□ -0.7
CHD7-208ENST00000528280 LOXHD1Q8IVV2 1947 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 USP34Q70CQ2 3546 aa10.7□□□□□ -0.7
CHD7-208ENST00000528280 ZDBF2Q9HCK1 2354 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 SPTBN4Q9H254 2564 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 TMEM150BA6NC51 233 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 GRM6O15303 877 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 OR52Z1P0C646 297 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 LINC00271P0C7V0 271 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 IBSPP21815 317 aaPredicted RBP10.69□□□□□ -0.7
CHD7-208ENST00000528280 RPA1P27694 616 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 PPM1AP35813 382 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 TECP42680 631 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 PHKA2P46019 1235 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 DRP2Q13474 957 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 EMC2Q15006 297 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 ZNF174Q15697 407 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 TCEAL5Q5H9L2 206 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 TTC38Q5R3I4 469 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 HAUS3Q68CZ6 603 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 TWF2Q6IBS0 349 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms