RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 KDM3AQ9Y4C1 1321 aa11.21□□□□□ -0.61
CAPN1-210ENST00000527699 IGLV3-22A0A075B6J6 115 aa11.21□□□□□ -0.61
CAPN1-210ENST00000527699 TMEM150BA6NC51 233 aa11.21□□□□□ -0.61
CAPN1-210ENST00000527699 DTNBO60941 627 aa11.21□□□□□ -0.61
CAPN1-210ENST00000527699 GPR32O75388 356 aa11.21□□□□□ -0.61
CAPN1-210ENST00000527699 PSAPP07602 524 aa11.21□□□□□ -0.61
CAPN1-210ENST00000527699 METAP2P50579 478 aaKnown RBP eCLIP11.21□□□□□ -0.613e-8■■■■■ 34.2
CAPN1-210ENST00000527699 CRYBB1P53674 252 aaPredicted RBP11.21□□□□□ -0.61
CAPN1-210ENST00000527699 NLRP11P59045 1033 aaKnown RBP11.21□□□□□ -0.61
CAPN1-210ENST00000527699 AP3B2Q13367 1082 aa11.21□□□□□ -0.61
CAPN1-210ENST00000527699 UGCGQ16739 394 aa11.21□□□□□ -0.61
CAPN1-210ENST00000527699 DUSP6Q16828 381 aa11.21□□□□□ -0.61
CAPN1-210ENST00000527699 VARS2Q5ST30 1063 aaKnown RBP11.21□□□□□ -0.61
CAPN1-210ENST00000527699 RNF20Q5VTR2 975 aa11.21□□□□□ -0.61
CAPN1-210ENST00000527699 SLC24A5Q71RS6 500 aa11.21□□□□□ -0.61
CAPN1-210ENST00000527699 SUSD6Q92537 303 aa11.21□□□□□ -0.61
CAPN1-210ENST00000527699 CASD1Q96PB1 797 aa11.21□□□□□ -0.61
CAPN1-210ENST00000527699 TCF25Q9BQ70 676 aa11.21□□□□□ -0.61
CAPN1-210ENST00000527699 LARP6Q9BRS8 491 aaKnown RBP11.21□□□□□ -0.61
CAPN1-210ENST00000527699 C1orf112Q9NSG2 853 aa11.21□□□□□ -0.61
CAPN1-210ENST00000527699 RNF19AQ9NV58 838 aa11.21□□□□□ -0.61
CAPN1-210ENST00000527699 FBXL21Q9UKT6 434 aa11.21□□□□□ -0.61
CAPN1-210ENST00000527699 ASPMQ8IZT6 3477 aa11.21□□□□□ -0.62
CAPN1-210ENST00000527699 ASH1LQ9NR48 2969 aaKnown RBP11.2□□□□□ -0.62
CAPN1-210ENST00000527699 FSCN2O14926 492 aa11.2□□□□□ -0.62
CAPN1-210ENST00000527699 KINO60870 393 aaKnown RBP11.2□□□□□ -0.62
CAPN1-210ENST00000527699 RPLP2P05387 115 aaKnown RBP11.2□□□□□ -0.62
CAPN1-210ENST00000527699 DSC3Q14574 896 aa11.2□□□□□ -0.62
CAPN1-210ENST00000527699 PFKFB3Q16875 520 aaPredicted RBP11.2□□□□□ -0.62
CAPN1-210ENST00000527699 ANKRD54Q6NXT1 300 aa11.2□□□□□ -0.62
CAPN1-210ENST00000527699 TMC7Q7Z402 723 aa11.2□□□□□ -0.62
CAPN1-210ENST00000527699 FEZF2Q8TBJ5 459 aa11.2□□□□□ -0.62
CAPN1-210ENST00000527699 HELQQ8TDG4 1101 aa11.2□□□□□ -0.62
CAPN1-210ENST00000527699 AUTS2Q8WXX7 1259 aa11.2□□□□□ -0.62
CAPN1-210ENST00000527699 BRF1Q92994 677 aa11.2□□□□□ -0.62
CAPN1-210ENST00000527699 JAKMIP1Q96N16 626 aaKnown RBP11.2□□□□□ -0.62
CAPN1-210ENST00000527699 DACH1Q9UI36 760 aa11.2□□□□□ -0.62
CAPN1-210ENST00000527699 ZMIZ1Q9ULJ6 1067 aa11.2□□□□□ -0.62
CAPN1-210ENST00000527699 MAFBQ9Y5Q3 323 aaPredicted RBP11.2□□□□□ -0.62
CAPN1-210ENST00000527699 COL1A2P08123 1366 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 C2CD4DB7Z1M9 353 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 ZNF862O60290 1169 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 PROS1P07225 676 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 ZSCAN20P17040 1043 aaPredicted RBP11.19□□□□□ -0.62
CAPN1-210ENST00000527699 LAG3P18627 525 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 SLC26A2P50443 739 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 CCT2P78371 535 aaKnown RBP11.19□□□□□ -0.62
CAPN1-210ENST00000527699 ODR4Q5SWX8 454 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 KCNT2Q6UVM3 1135 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 NIPA1Q7RTP0 329 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 ECHDC2Q86YB7 292 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 ABI1Q8IZP0 508 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 C12orf76Q8N812 135 aaPredicted RBP11.19□□□□□ -0.62
CAPN1-210ENST00000527699 NLRP7Q8WX94 980 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 BBXQ8WY36 941 aaPredicted RBP11.19□□□□□ -0.62
CAPN1-210ENST00000527699 MRPS27Q92552 414 aaKnown RBP11.19□□□□□ -0.62
CAPN1-210ENST00000527699 LPPQ93052 612 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 ZNF558Q96NG5 402 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 SLC26A6Q9BXS9 759 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 ADAMTS10Q9H324 1103 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 UNC45AQ9H3U1 944 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 NCOA5Q9HCD5 579 aaKnown RBP11.19□□□□□ -0.62
CAPN1-210ENST00000527699 C6orf50Q9HD87 102 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 TMEM161AQ9NX61 479 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 VPS54Q9P1Q0 977 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 PCDHA10Q9Y5I2 948 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 FANCMQ8IYD8 2048 aa11.19□□□□□ -0.62
CAPN1-210ENST00000527699 FNDC1Q4ZHG4 1894 aaPredicted RBP11.19□□□□□ -0.62
CAPN1-210ENST00000527699 EVPLQ92817 2033 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 MSH4O15457 936 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 EDIL3O43854 480 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 CYP3A4P08684 503 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 SP9P0CG40 484 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 SRGAP2BP0DMP2 458 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 MYBP10242 640 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 FAM189BP81408 668 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 PRKCEQ02156 737 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 DRP2Q13474 957 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 MTERF2Q49AM1 385 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 CLLU1OSQ5K130 101 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 SPECC1Q5M775 1068 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 RARS2Q5T160 578 aaKnown RBP11.18□□□□□ -0.62
CAPN1-210ENST00000527699 ZNF746Q6NUN9 644 aaPredicted RBP11.18□□□□□ -0.62
CAPN1-210ENST00000527699 SYCE2Q6PIF2 218 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 REXO1Q8N1G1 1221 aaKnown RBP11.18□□□□□ -0.62
CAPN1-210ENST00000527699 SUMF1Q8NBK3 374 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 CCDC136Q96JN2 1154 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 MAP7D2Q96T17 732 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 TMEM117Q9H0C3 514 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 S1PR5Q9H228 398 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 DISC1Q9NRI5 854 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 IGSF5Q9NSI5 407 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 TBC1D22BQ9NU19 505 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 PUF60Q9UHX1 559 aaKnown RBP11.18□□□□□ -0.62
CAPN1-210ENST00000527699 LHX6Q9UPM6 363 aa11.18□□□□□ -0.62
CAPN1-210ENST00000527699 hCG_1984214I3L0E3 225 aa11.17□□□□□ -0.62
CAPN1-210ENST00000527699 CXCL14O95715 111 aa11.17□□□□□ -0.62
CAPN1-210ENST00000527699 OATP04181 439 aa11.17□□□□□ -0.62
CAPN1-210ENST00000527699 NPR3P17342 541 aa11.17□□□□□ -0.62
CAPN1-210ENST00000527699 AKAP17AQ02040 695 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms