RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 SCFD2Q8WU76 684 aa19.12■□□□□ 0.65
USH1C-205ENST00000527020 PBKQ96KB5 322 aa19.12■□□□□ 0.65
USH1C-205ENST00000527020 RAD51CO43502 376 aa19.12■□□□□ 0.65
USH1C-205ENST00000527020 EGFRP00533 1210 aa19.12■□□□□ 0.65
USH1C-205ENST00000527020 FAM153BP0C7A2 387 aa19.12■□□□□ 0.65
USH1C-205ENST00000527020 NNTQ13423 1086 aa19.12■□□□□ 0.65
USH1C-205ENST00000527020 FAM153CQ494X1 144 aa19.12■□□□□ 0.65
USH1C-205ENST00000527020 MCF2L2Q86YR7 1114 aa19.12■□□□□ 0.65
USH1C-205ENST00000527020 CASKIN2Q8WXE0 1202 aa19.12■□□□□ 0.65
USH1C-205ENST00000527020 LPAR1Q92633 364 aa19.12■□□□□ 0.65
USH1C-205ENST00000527020 TAAR1Q96RJ0 339 aa19.12■□□□□ 0.65
USH1C-205ENST00000527020 KIAA1683Q9H0B3 1180 aa19.12■□□□□ 0.65
USH1C-205ENST00000527020 FAM153AQ9UHL3 310 aa19.12■□□□□ 0.65
USH1C-205ENST00000527020 NFU1Q9UMS0 254 aa19.12■□□□□ 0.65
USH1C-205ENST00000527020 NCANO14594 1321 aa19.11■□□□□ 0.65
USH1C-205ENST00000527020 TMEM150BA6NC51 233 aa19.11■□□□□ 0.65
USH1C-205ENST00000527020 MAPTP10636 758 aaKnown RBP19.11■□□□□ 0.65
USH1C-205ENST00000527020 NPEPPSP55786 919 aa19.11■□□□□ 0.65
USH1C-205ENST00000527020 TRADDQ15628 312 aa19.11■□□□□ 0.65
USH1C-205ENST00000527020 UGCGQ16739 394 aa19.11■□□□□ 0.65
USH1C-205ENST00000527020 NT5DC3Q86UY8 548 aa19.11■□□□□ 0.65
USH1C-205ENST00000527020 TMEM174Q8WUU8 243 aa19.11■□□□□ 0.65
USH1C-205ENST00000527020 SH2D3AQ9BRG2 576 aa19.11■□□□□ 0.65
USH1C-205ENST00000527020 PCIF1Q9H4Z3 704 aa19.11■□□□□ 0.65
USH1C-205ENST00000527020 HOMER2Q9NSB8 354 aa19.11■□□□□ 0.65
USH1C-205ENST00000527020 IGSF9BQ9UPX0 1349 aa19.11■□□□□ 0.65
USH1C-205ENST00000527020 RPS6KA5O75582 802 aa19.1■□□□□ 0.65
USH1C-205ENST00000527020 LYPLA2O95372 231 aa19.1■□□□□ 0.65
USH1C-205ENST00000527020 LMNB1P20700 586 aa19.1■□□□□ 0.65
USH1C-205ENST00000527020 QARSP47897 775 aaKnown RBP19.1■□□□□ 0.65
USH1C-205ENST00000527020 MTMR1Q13613 665 aa19.1■□□□□ 0.65
USH1C-205ENST00000527020 C1orf220Q5T0J3 134 aa19.1■□□□□ 0.65
USH1C-205ENST00000527020 ZSWIM2Q8NEG5 633 aa19.1■□□□□ 0.65
USH1C-205ENST00000527020 LARSQ9P2J5 1176 aaKnown RBP19.1■□□□□ 0.65
USH1C-205ENST00000527020 SUCLA2Q9P2R7 463 aaPredicted RBP19.1■□□□□ 0.65
USH1C-205ENST00000527020 ASTN2O75129 1339 aaPredicted RBP19.1■□□□□ 0.65
USH1C-205ENST00000527020 CEP104O60308 925 aa19.1■□□□□ 0.65
USH1C-205ENST00000527020 LRRN2O75325 713 aa19.1■□□□□ 0.65
USH1C-205ENST00000527020 PLS3P13797 630 aa19.1■□□□□ 0.65
USH1C-205ENST00000527020 TNIP1Q15025 636 aa19.1■□□□□ 0.65
USH1C-205ENST00000527020 C12orf56Q8IXR9 622 aa19.1■□□□□ 0.65
USH1C-205ENST00000527020 CBWD1Q9BRT8 395 aa19.1■□□□□ 0.65
USH1C-205ENST00000527020 OSGEPQ9NPF4 335 aa19.1■□□□□ 0.65
USH1C-205ENST00000527020 COL11A1P12107 1806 aaPredicted RBP19.1■□□□□ 0.65
USH1C-205ENST00000527020 EIF2AK2P19525 551 aaKnown RBP19.09■□□□□ 0.65
USH1C-205ENST00000527020 RPS6P62753 249 aaKnown RBP19.09■□□□□ 0.65
USH1C-205ENST00000527020 TNNC1P63316 161 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 KIF22Q14807 665 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 PGM5Q15124 567 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 ALS2CLQ60I27 953 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 PEX26Q7Z412 305 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 PALB2Q86YC2 1186 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 KLHL7Q8IXQ5 586 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 BCS1LQ9Y276 419 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 SAMM50Q9Y512 469 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 KIAA1217Q5T5P2 1943 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 EMSYQ7Z589 1322 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 TMCO5BA8MYB1 307 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 ATP9AO75110 1047 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 TMEM253P0C7T8 217 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 PPP3CAQ08209 521 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 PAK2Q13177 524 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 ARHGAP44Q17R89 818 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 CIAPIN1Q6FI81 312 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 RASGEF1CQ8N431 466 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 PLEKHO2Q8TD55 490 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 LMBR1Q8WVP7 490 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 IFT81Q8WYA0 676 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 HES6Q96HZ4 224 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 ACCSQ96QU6 501 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 TMEM206Q9H813 350 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 TAS2R14Q9NYV8 317 aa19.09■□□□□ 0.65
USH1C-205ENST00000527020 NOC2LQ9Y3T9 749 aaKnown RBP19.09■□□□□ 0.65
USH1C-205ENST00000527020 RLFQ13129 1914 aa19.08■□□□□ 0.65
USH1C-205ENST00000527020 BHMG1C9JSJ3 638 aaPredicted RBP19.08■□□□□ 0.65
USH1C-205ENST00000527020 FOXN3O00409 490 aaPredicted RBP19.08■□□□□ 0.65
USH1C-205ENST00000527020 YWHABP31946 246 aaKnown RBP19.08■□□□□ 0.65
USH1C-205ENST00000527020 GTF2BQ00403 316 aa19.08■□□□□ 0.65
USH1C-205ENST00000527020 ALCAMQ13740 583 aa19.08■□□□□ 0.65
USH1C-205ENST00000527020 DAAM2Q86T65 1068 aa19.08■□□□□ 0.65
USH1C-205ENST00000527020 SLC35G2Q8TBE7 412 aa19.08■□□□□ 0.65
USH1C-205ENST00000527020 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.08■□□□□ 0.65
USH1C-205ENST00000527020 PPP1R9AQ9ULJ8 1098 aa19.08■□□□□ 0.65
USH1C-205ENST00000527020 DAAM1Q9Y4D1 1078 aa19.08■□□□□ 0.65
USH1C-205ENST00000527020 PGRMC1O00264 195 aaKnown RBP19.08■□□□□ 0.64
USH1C-205ENST00000527020 BACH1O14867 736 aa19.08■□□□□ 0.64
USH1C-205ENST00000527020 BUB1BO60566 1050 aaPredicted RBP19.08■□□□□ 0.64
USH1C-205ENST00000527020 CCNE2O96020 404 aa19.08■□□□□ 0.64
USH1C-205ENST00000527020 VCAM1P19320 739 aa19.08■□□□□ 0.64
USH1C-205ENST00000527020 VAMP7P51809 220 aa19.08■□□□□ 0.64
USH1C-205ENST00000527020 PPATQ06203 517 aa19.08■□□□□ 0.64
USH1C-205ENST00000527020 EPC2Q52LR7 807 aa19.08■□□□□ 0.64
USH1C-205ENST00000527020 LRRC31Q6UY01 552 aa19.08■□□□□ 0.64
USH1C-205ENST00000527020 LEKR1Q6ZMV7 388 aa19.08■□□□□ 0.64
USH1C-205ENST00000527020 INTS8Q75QN2 995 aaKnown RBP19.08■□□□□ 0.64
USH1C-205ENST00000527020 ARHGEF19Q8IW93 802 aa19.08■□□□□ 0.64
USH1C-205ENST00000527020 SYCE1Q8N0S2 351 aa19.08■□□□□ 0.64
USH1C-205ENST00000527020 MREGQ8N565 214 aa19.08■□□□□ 0.64
USH1C-205ENST00000527020 GOLGA6L1Q8N7Z2 621 aa19.08■□□□□ 0.64
USH1C-205ENST00000527020 RFFLQ8WZ73 363 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms