RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 C1QL3Q5VWW1 255 aa6.29□□□□□ -1.4
CSDE1-210ENST00000525878 ZNF662Q6ZS27 426 aa6.29□□□□□ -1.4
CSDE1-210ENST00000525878 DYDC2Q96IM9 177 aa6.29□□□□□ -1.4
CSDE1-210ENST00000525878 WDR92Q96MX6 357 aa6.29□□□□□ -1.4
CSDE1-210ENST00000525878 TCF25Q9BQ70 676 aa6.29□□□□□ -1.4
CSDE1-210ENST00000525878 POLR3BQ9NW08 1133 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-210ENST00000525878 TOX4O94842 621 aa6.28□□□□□ -1.4
CSDE1-210ENST00000525878 RAPGEF3O95398 923 aa6.28□□□□□ -1.4
CSDE1-210ENST00000525878 ASLP04424 464 aa6.28□□□□□ -1.4
CSDE1-210ENST00000525878 PTX3P26022 381 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-210ENST00000525878 BCAR1P56945 870 aa6.28□□□□□ -1.4
CSDE1-210ENST00000525878 MYBPC3Q14896 1274 aa6.28□□□□□ -1.4
CSDE1-210ENST00000525878 KANSL1Q7Z3B3 1105 aa6.28□□□□□ -1.4
CSDE1-210ENST00000525878 NME9Q86XW9 330 aa6.28□□□□□ -1.4
CSDE1-210ENST00000525878 GSPT2Q8IYD1 628 aaKnown RBP6.28□□□□□ -1.4
CSDE1-210ENST00000525878 RPUSD2Q8IZ73 545 aaKnown RBP6.28□□□□□ -1.4
CSDE1-210ENST00000525878 GPR87Q9BY21 358 aa6.28□□□□□ -1.4
CSDE1-210ENST00000525878 PITHD1Q9GZP4 211 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-210ENST00000525878 PTPDC1A2A3K4 754 aa6.27□□□□□ -1.41
CSDE1-210ENST00000525878 DNAJC8O75937 253 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-210ENST00000525878 JUNP05412 331 aaKnown RBP6.27□□□□□ -1.41
CSDE1-210ENST00000525878 SMAD3P84022 425 aaKnown RBP6.27□□□□□ -1.41
CSDE1-210ENST00000525878 FKBP15Q5T1M5 1219 aa6.27□□□□□ -1.41
CSDE1-210ENST00000525878 NAIF1Q69YI7 327 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-210ENST00000525878 RHOUQ7L0Q8 258 aa6.27□□□□□ -1.41
CSDE1-210ENST00000525878 MRGPREQ86SM8 312 aa6.27□□□□□ -1.41
CSDE1-210ENST00000525878 KIAA1958Q8N8K9 716 aa6.27□□□□□ -1.41
CSDE1-210ENST00000525878 TRPS1Q9UHF7 1281 aa6.27□□□□□ -1.41
CSDE1-210ENST00000525878 GOLGA8BA8MQT2 603 aa6.26□□□□□ -1.41
CSDE1-210ENST00000525878 GRXCR1A8MXD5 290 aa6.26□□□□□ -1.41
CSDE1-210ENST00000525878 H7C1D1 291 aa6.26□□□□□ -1.41
CSDE1-210ENST00000525878 MTSS1O43312 755 aa6.26□□□□□ -1.41
CSDE1-210ENST00000525878 RAMP2O60895 175 aa6.26□□□□□ -1.41
CSDE1-210ENST00000525878 TGM1P22735 817 aa6.26□□□□□ -1.41
CSDE1-210ENST00000525878 RABL3Q5HYI8 236 aa6.26□□□□□ -1.41
CSDE1-210ENST00000525878 PRAMEF9Q5VWM5 478 aa6.26□□□□□ -1.41
CSDE1-210ENST00000525878 CREB3L3Q68CJ9 461 aa6.26□□□□□ -1.41
CSDE1-210ENST00000525878 MFSD5Q6N075 450 aa6.26□□□□□ -1.41
CSDE1-210ENST00000525878 MDGA1Q8NFP4 955 aa6.26□□□□□ -1.41
CSDE1-210ENST00000525878 LENG9Q96B70 501 aa6.26□□□□□ -1.41
CSDE1-210ENST00000525878 PCIF1Q9H4Z3 704 aa6.26□□□□□ -1.41
CSDE1-210ENST00000525878 B4GALT6Q9UBX8 382 aa6.26□□□□□ -1.41
CSDE1-210ENST00000525878 DNAI1Q9UI46 699 aa6.26□□□□□ -1.41
CSDE1-210ENST00000525878 TNPO3Q9Y5L0 923 aaKnown RBP6.26□□□□□ -1.41
CSDE1-210ENST00000525878 A0A0A6YYJ9 748 aa6.25□□□□□ -1.41
CSDE1-210ENST00000525878 PTGS2P35354 604 aa6.25□□□□□ -1.41
CSDE1-210ENST00000525878 KIR2DL3P43628 341 aa6.25□□□□□ -1.41
CSDE1-210ENST00000525878 ZNF460Q14592 562 aa6.25□□□□□ -1.41
CSDE1-210ENST00000525878 ESRP1Q6NXG1 681 aaKnown RBP6.25□□□□□ -1.41
CSDE1-210ENST00000525878 DNAJC10Q8IXB1 793 aa6.25□□□□□ -1.41
CSDE1-210ENST00000525878 ELOA2Q8IYF1 753 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-210ENST00000525878 RPGRQ92834 1020 aaKnown RBP6.25□□□□□ -1.41
CSDE1-210ENST00000525878 ZNF512Q96ME7 567 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-210ENST00000525878 TUBGCP5Q96RT8 1024 aa6.25□□□□□ -1.41
CSDE1-210ENST00000525878 MNTQ99583 582 aa6.25□□□□□ -1.41
CSDE1-210ENST00000525878 TTPALQ9BTX7 342 aa6.25□□□□□ -1.41
CSDE1-210ENST00000525878 OSBPL6Q9BZF3 934 aa6.25□□□□□ -1.41
CSDE1-210ENST00000525878 NRDE2Q9H7Z3 1164 aa6.25□□□□□ -1.41
CSDE1-210ENST00000525878 C14orf93Q9H972 538 aaKnown RBP6.25□□□□□ -1.41
CSDE1-210ENST00000525878 CABP5Q9NP86 173 aa6.25□□□□□ -1.41
CSDE1-210ENST00000525878 A0A0A6YYK5 440 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-210ENST00000525878 TMEM191CA6NGB0 347 aa6.24□□□□□ -1.41
CSDE1-210ENST00000525878 CBX4O00257 560 aa6.24□□□□□ -1.41
CSDE1-210ENST00000525878 RPS6KA4O75676 772 aa6.24□□□□□ -1.41
CSDE1-210ENST00000525878 HNRNPLP14866 589 aaKnown RBP eCLIP6.24□□□□□ -1.415e-8■□□□□ 8.7
CSDE1-210ENST00000525878 ADCY1Q08828 1119 aa6.24□□□□□ -1.41
CSDE1-210ENST00000525878 SPIDRQ14159 915 aa6.24□□□□□ -1.41
CSDE1-210ENST00000525878 ZNF174Q15697 407 aa6.24□□□□□ -1.41
CSDE1-210ENST00000525878 CMTM4Q8IZR5 234 aa6.24□□□□□ -1.41
CSDE1-210ENST00000525878 PPP1R14CQ8TAE6 165 aa6.24□□□□□ -1.41
CSDE1-210ENST00000525878 SLC25A43Q8WUT9 341 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-210ENST00000525878 HAS1Q92839 578 aa6.24□□□□□ -1.41
CSDE1-210ENST00000525878 ZG16BQ96DA0 208 aa6.24□□□□□ -1.41
CSDE1-210ENST00000525878 ELF4Q99607 663 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-210ENST00000525878 SOX7Q9BT81 388 aa6.24□□□□□ -1.41
CSDE1-210ENST00000525878 RCAN3Q9UKA8 241 aa6.24□□□□□ -1.41
CSDE1-210ENST00000525878 GOLGA6L6A8MZA4 724 aa6.23□□□□□ -1.41
CSDE1-210ENST00000525878 DAPK3O43293 454 aa6.23□□□□□ -1.41
CSDE1-210ENST00000525878 OPA1O60313 960 aa6.23□□□□□ -1.41
CSDE1-210ENST00000525878 MFAP3LO75121 409 aa6.23□□□□□ -1.41
CSDE1-210ENST00000525878 SLC9A1P19634 815 aa6.23□□□□□ -1.41
CSDE1-210ENST00000525878 NR4A1P22736 598 aa6.23□□□□□ -1.41
CSDE1-210ENST00000525878 ADCY2Q08462 1091 aa6.23□□□□□ -1.41
CSDE1-210ENST00000525878 SQSTM1Q13501 440 aa6.23□□□□□ -1.41
CSDE1-210ENST00000525878 KRT40Q6A162 431 aa6.23□□□□□ -1.41
CSDE1-210ENST00000525878 LAIR1Q6GTX8 287 aa6.23□□□□□ -1.41
CSDE1-210ENST00000525878 ATXN2LQ8WWM7 1075 aaKnown RBP6.23□□□□□ -1.41
CSDE1-210ENST00000525878 ENKD1Q9H0I2 346 aa6.23□□□□□ -1.41
CSDE1-210ENST00000525878 SPO11Q9Y5K1 396 aa6.23□□□□□ -1.41
CSDE1-210ENST00000525878 FAM20BO75063 409 aa6.22□□□□□ -1.41
CSDE1-210ENST00000525878 IPO13O94829 963 aaKnown RBP6.22□□□□□ -1.41
CSDE1-210ENST00000525878 PROZP22891 400 aa6.22□□□□□ -1.41
CSDE1-210ENST00000525878 RANGAP1P46060 587 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-210ENST00000525878 DCAF17Q5H9S7 520 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-210ENST00000525878 PIK3R6Q5UE93 754 aa6.22□□□□□ -1.41
CSDE1-210ENST00000525878 UNQ6494/PRO21346Q6UXR6 183 aa6.22□□□□□ -1.41
CSDE1-210ENST00000525878 PHYKPLQ8IUZ5 450 aa6.22□□□□□ -1.41
CSDE1-210ENST00000525878 PMFBP1Q8TBY8 1022 aa6.22□□□□□ -1.41
CSDE1-210ENST00000525878 ORAI3Q9BRQ5 295 aa6.22□□□□□ -1.41
CSDE1-210ENST00000525878 MTG2Q9H4K7 406 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms