RNA–Protein interactions for RNA: ENST00000525378.5

NDUFS3-204, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 779 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-204ENST00000525378 XKR3Q5GH77 459 aa13.2□□□□□ -0.3
NDUFS3-204ENST00000525378 ANKRD54Q6NXT1 300 aa13.2□□□□□ -0.3
NDUFS3-204ENST00000525378 TMC7Q7Z402 723 aa13.2□□□□□ -0.3
NDUFS3-204ENST00000525378 SLC39A11Q8N1S5 342 aa13.2□□□□□ -0.3
NDUFS3-204ENST00000525378 DAGLBQ8NCG7 672 aa13.2□□□□□ -0.3
NDUFS3-204ENST00000525378 ZNF274Q96GC6 653 aaPredicted RBP13.2□□□□□ -0.3
NDUFS3-204ENST00000525378 FDXACB1Q9BRP7 624 aaPredicted RBP13.2□□□□□ -0.3
NDUFS3-204ENST00000525378 GCOM2Q9BZD3 368 aaPredicted RBP13.2□□□□□ -0.3
NDUFS3-204ENST00000525378 C22orf23Q9BZE7 217 aa13.2□□□□□ -0.3
NDUFS3-204ENST00000525378 KCNH6Q9H252 994 aa13.2□□□□□ -0.3
NDUFS3-204ENST00000525378 NGRNQ9NPE2 291 aaKnown RBP13.2□□□□□ -0.3
NDUFS3-204ENST00000525378 CDH22Q9UJ99 828 aa13.2□□□□□ -0.3
NDUFS3-204ENST00000525378 CYP46A1Q9Y6A2 500 aa13.2□□□□□ -0.3
NDUFS3-204ENST00000525378 FSD2A1L4K1 749 aa13.19□□□□□ -0.3
NDUFS3-204ENST00000525378 TMEM221A6NGB7 291 aa13.19□□□□□ -0.3
NDUFS3-204ENST00000525378 M0R296 226 aa13.19□□□□□ -0.3
NDUFS3-204ENST00000525378 EML1O00423 815 aa13.19□□□□□ -0.3
NDUFS3-204ENST00000525378 CPLX1O14810 134 aa13.19□□□□□ -0.3
NDUFS3-204ENST00000525378 SLC37A4O43826 429 aa13.19□□□□□ -0.3
NDUFS3-204ENST00000525378 DTNBO60941 627 aa13.19□□□□□ -0.3
NDUFS3-204ENST00000525378 EOMESO95936 686 aa13.19□□□□□ -0.3
NDUFS3-204ENST00000525378 PPM1AP35813 382 aa13.19□□□□□ -0.3
NDUFS3-204ENST00000525378 KRT17Q04695 432 aa13.19□□□□□ -0.3
NDUFS3-204ENST00000525378 INF2Q27J81 1249 aa13.19□□□□□ -0.3
NDUFS3-204ENST00000525378 LONRF3Q496Y0 759 aa13.19□□□□□ -0.3
NDUFS3-204ENST00000525378 MOXD1Q6UVY6 613 aa13.19□□□□□ -0.3
NDUFS3-204ENST00000525378 TRIM67Q6ZTA4 783 aa13.19□□□□□ -0.3
NDUFS3-204ENST00000525378 BMP8AQ7Z5Y6 402 aa13.19□□□□□ -0.3
NDUFS3-204ENST00000525378 KSR1Q8IVT5 923 aa13.19□□□□□ -0.3
NDUFS3-204ENST00000525378 LPPQ93052 612 aa13.19□□□□□ -0.3
NDUFS3-204ENST00000525378 MFSD14AQ96MC6 490 aa13.19□□□□□ -0.3
NDUFS3-204ENST00000525378 DACT1Q9NYF0 836 aa13.19□□□□□ -0.3
NDUFS3-204ENST00000525378 KCNJ14Q9UNX9 436 aa13.19□□□□□ -0.3
NDUFS3-204ENST00000525378 MEIS3P2A8K0S8 358 aa13.18□□□□□ -0.3
NDUFS3-204ENST00000525378 DDX11L8A8MPP1 907 aa13.18□□□□□ -0.3
NDUFS3-204ENST00000525378 EPB41L2O43491 1005 aaKnown RBP13.18□□□□□ -0.3
NDUFS3-204ENST00000525378 MAFO75444 373 aaPredicted RBP13.18□□□□□ -0.3
NDUFS3-204ENST00000525378 SP100P23497 879 aaPredicted RBP13.18□□□□□ -0.3
NDUFS3-204ENST00000525378 PHKA2P46019 1235 aa13.18□□□□□ -0.3
NDUFS3-204ENST00000525378 BCAR1P56945 870 aa13.18□□□□□ -0.3
NDUFS3-204ENST00000525378 NONOQ15233 471 aaKnown RBP eCLIP13.18□□□□□ -0.3
NDUFS3-204ENST00000525378 PLA2G4FQ68DD2 849 aa13.18□□□□□ -0.3
NDUFS3-204ENST00000525378 ANO5Q75V66 913 aa13.18□□□□□ -0.3
NDUFS3-204ENST00000525378 TMEM173Q86WV6 379 aaPredicted RBP13.18□□□□□ -0.3
NDUFS3-204ENST00000525378 RHPN2Q8IUC4 686 aa13.18□□□□□ -0.3
NDUFS3-204ENST00000525378 PBXIP1Q96AQ6 731 aa13.18□□□□□ -0.3
NDUFS3-204ENST00000525378 TM6SF1Q9BZW5 370 aa13.18□□□□□ -0.3
NDUFS3-204ENST00000525378 CHST12Q9NRB3 414 aa13.18□□□□□ -0.3
NDUFS3-204ENST00000525378 SUCLA2Q9P2R7 463 aaPredicted RBP13.18□□□□□ -0.3
NDUFS3-204ENST00000525378 DDX25Q9UHL0 483 aaKnown RBP13.18□□□□□ -0.3
NDUFS3-204ENST00000525378 HCFC2Q9Y5Z7 792 aa13.18□□□□□ -0.3
NDUFS3-204ENST00000525378 C2orf16Q68DN1 1984 aa13.18□□□□□ -0.3
NDUFS3-204ENST00000525378 C2orf71A6NGG8 1288 aa13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 CLASP2O75122 1294 aaKnown RBP13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 SRGAP2BP0DMP2 458 aa13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 MRE11P49959 708 aa13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 NPEPPSP55786 919 aa13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 PSMC5P62195 406 aa13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 CDC42EP1Q00587 391 aa13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 SCRN1Q12765 414 aa13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 SMC1AQ14683 1233 aaKnown RBP13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 LETM2Q2VYF4 491 aa13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 IER5LQ5T953 404 aa13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 TWF2Q6IBS0 349 aaKnown RBP13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 KRT25Q7Z3Z0 450 aa13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 ZNF410Q86VK4 478 aa13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 MRPL43Q8N983 215 aaKnown RBP13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 ZNF579Q8NAF0 562 aaKnown RBP13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 NLRP4Q96MN2 994 aa13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 TRAIPQ9BWF2 469 aa13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 MRPL9Q9BYD2 267 aaKnown RBP13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 NRDE2Q9H7Z3 1164 aa13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 GJB4Q9NTQ9 266 aa13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 WRAP73Q9P2S5 460 aaPredicted RBP13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 PIN4Q9Y237 131 aaKnown RBP13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 TDRD15B5MCY1 1934 aaKnown RBP13.17□□□□□ -0.3
NDUFS3-204ENST00000525378 DENND4AQ7Z401 1863 aa13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 ZC3H11AO75152 810 aaKnown RBP eCLIP13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 HOXB8P17481 243 aaPredicted RBP13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 SFPQP23246 707 aaKnown RBP eCLIP13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 CA8P35219 290 aa13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 ALDH7A1P49419 539 aaKnown RBP13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 DNM2P50570 870 aa13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 SIGLEC14Q08ET2 396 aa13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 PPP2R5CQ13362 524 aa13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 GALNT17Q6IS24 598 aa13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 CPLX2Q6PUV4 134 aaKnown RBP13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 CATSPER4Q7RTX7 472 aa13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 PRSS33Q8NF86 280 aa13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 BCL7CQ8WUZ0 217 aaPredicted RBP13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 AUTS2Q8WXX7 1259 aa13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 CASP10Q92851 521 aa13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 ASIC4Q96FT7 647 aa13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 PHOX2BQ99453 314 aa13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 PHF20Q9BVI0 1012 aa13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 INO80BQ9C086 356 aaPredicted RBP13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 ZBP1Q9H171 429 aa13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 IFT122Q9HBG6 1241 aa13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 KCNMB3Q9NPA1 279 aa13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 CYP26B1Q9NR63 512 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms