RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 SLC12A8A0AV02 714 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 KLRG2A4D1S0 409 aaPredicted RBP2.68□□□□□ -1.98
CD44-212ENST00000524922 FAM83GA6ND36 823 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 GLRX3O76003 335 aaKnown RBP2.68□□□□□ -1.98
CD44-212ENST00000524922 NR4A1P22736 598 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 ZFP36P26651 326 aaKnown RBP2.68□□□□□ -1.98
CD44-212ENST00000524922 MCM7P33993 719 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 FNTBP49356 437 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 RBM25P49756 843 aaKnown RBP2.68□□□□□ -1.98
CD44-212ENST00000524922 RGS3P49796 1198 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 MEOX1P50221 254 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 INHBCP55103 352 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 INHBEP58166 350 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 ATP2C1P98194 919 aaPredicted RBP2.68□□□□□ -1.98
CD44-212ENST00000524922 RPUSD2Q8IZ73 545 aaKnown RBP2.68□□□□□ -1.98
CD44-212ENST00000524922 RTKN2Q8IZC4 609 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 D2HGDHQ8N465 521 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 OR5AN1Q8NGI8 311 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 ZNF483Q8TF39 744 aaPredicted RBP2.68□□□□□ -1.98
CD44-212ENST00000524922 MKL1Q969V6 931 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 TMEM176AQ96HP8 235 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 MAGEB10Q96LZ2 347 aaPredicted RBP2.68□□□□□ -1.98
CD44-212ENST00000524922 C8orf37Q96NL8 207 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 BOCQ9BWV1 1114 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 TANGO6Q9C0B7 1094 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 CSRNP2Q9H175 543 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 SLC6A15Q9H2J7 730 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 SFMBT1Q9UHJ3 866 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 GIT1Q9Y2X7 761 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 CCDC9Q9Y3X0 531 aaKnown RBP2.68□□□□□ -1.98
CD44-212ENST00000524922 WDR7Q9Y4E6 1490 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 PTPRGP23470 1445 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 PCSK5Q92824 1860 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 CFAP43Q8NDM7 1665 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 A0A087X1B8 175 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 A0A0A6YYK5 440 aaPredicted RBP2.67□□□□□ -1.98
CD44-212ENST00000524922 DNAJC8O75937 253 aaPredicted RBP2.67□□□□□ -1.98
CD44-212ENST00000524922 NPTXRO95502 500 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 PEX11BO96011 259 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 ATP2B1P20020 1258 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 PROZP22891 400 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 MYBPC3Q14896 1274 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 TMEM132BQ14DG7 1078 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 C2orf27AQ580R0 203 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 ESRP1Q6NXG1 681 aaKnown RBP2.67□□□□□ -1.98
CD44-212ENST00000524922 ZCCHC8Q6NZY4 707 aaKnown RBP2.67□□□□□ -1.98
CD44-212ENST00000524922 KLHDC10Q6PID8 442 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 KANSL1Q7Z3B3 1105 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 SGMS1Q86VZ5 419 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 HIPK4Q8NE63 616 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 THAP3Q8WTV1 239 aaPredicted RBP2.67□□□□□ -1.98
CD44-212ENST00000524922 NEU4Q8WWR8 484 aaPredicted RBP2.67□□□□□ -1.98
CD44-212ENST00000524922 LPPQ93052 612 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 SOX7Q9BT81 388 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 PITHD1Q9GZP4 211 aaPredicted RBP2.67□□□□□ -1.98
CD44-212ENST00000524922 ENKD1Q9H0I2 346 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 SLC2A4RGQ9NR83 387 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 TRPS1Q9UHF7 1281 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 MAGEL2Q9UJ55 1249 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 DMRT1Q9Y5R6 373 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 PTCH2Q9Y6C5 1203 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 BIVM-ERCC5R4GMW8 1640 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 POGZQ7Z3K3 1410 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 YEATS2Q9ULM3 1422 aa2.67□□□□□ -1.98
CD44-212ENST00000524922 CUL7Q14999 1698 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 DISP3Q9P2K9 1392 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 CCDC163A0A0D9SF12 145 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 CAPN14A8MX76 684 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 PTX3P26022 381 aaPredicted RBP2.66□□□□□ -1.98
CD44-212ENST00000524922 PTTG1IPP53801 180 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 NANOS3P60323 173 aaKnown RBP2.66□□□□□ -1.98
CD44-212ENST00000524922 SQSTM1Q13501 440 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 ZNF460Q14592 562 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 GAGE13Q4V321 117 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 NAIF1Q69YI7 327 aaPredicted RBP2.66□□□□□ -1.98
CD44-212ENST00000524922 GAREM2Q75VX8 874 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 MRGPREQ86SM8 312 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 ZSWIM2Q8NEG5 633 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 PPP1R14CQ8TAE6 165 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 CALML6Q8TD86 181 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 SLC7A6OSQ96CW6 309 aaPredicted RBP2.66□□□□□ -1.98
CD44-212ENST00000524922 CLIP3Q96DZ5 547 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 MAML3Q96JK9 1138 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 HIRIP3Q9BW71 556 aaPredicted RBP2.66□□□□□ -1.98
CD44-212ENST00000524922 KANSL2Q9H9L4 492 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 FAM184BQ9ULE4 1060 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 ZMYM4Q5VZL5 1548 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 UGGT2Q9NYU1 1516 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 FHOD3Q2V2M9 1422 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 XDHP47989 1333 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 TTC37Q6PGP7 1564 aa2.66□□□□□ -1.98
CD44-212ENST00000524922 ARHGEF40Q8TER5 1519 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 A0A0A6YYJ9 748 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 A0A1W2PRX2 142 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 UBE2QL1A1L167 161 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 M0R2C6 588 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 PLD2O14939 933 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 FOXN1O15353 648 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 RAPGEF3O95398 923 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 CFBP00751 764 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms