RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 SQORQ9Y6N5 450 aa7.34□□□□□ -1.23
NUP98-213ENST00000524563 DOCK8Q8NF50 2099 aa7.34□□□□□ -1.23
NUP98-213ENST00000524563 MYH11P35749 1972 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 KDM3AQ9Y4C1 1321 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 PTPRZ1P23471 2315 aaPredicted RBP7.33□□□□□ -1.24
NUP98-213ENST00000524563 C19orf67A6NJJ6 358 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 PER2O15055 1255 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 GPR182O15218 404 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 CHMP2AO43633 222 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 CCNT1O60563 726 aaKnown RBP7.33□□□□□ -1.24
NUP98-213ENST00000524563 FGF18O76093 207 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 ATG7O95352 703 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 VTNP04004 478 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 KLRC1P26715 233 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 TECP42680 631 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 UBE3AQ05086 875 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 COL19A1Q14993 1142 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 KIZQ2M2Z5 673 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 CTC1Q2NKJ3 1217 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 ZNF484Q5JVG2 852 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 MARCH8Q5T0T0 291 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 PPP4R3AQ6IN85 833 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 B3GNT9Q6UX72 402 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 ABHD15Q6UXT9 468 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 PLPPR4Q7Z2D5 763 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 CCDC60Q8IWA6 550 aaPredicted RBP7.33□□□□□ -1.24
NUP98-213ENST00000524563 NME8Q8N427 588 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 ETNPPLQ8TBG4 499 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 SPPL3Q8TCT6 385 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 ZNF689Q96CS4 500 aaPredicted RBP7.33□□□□□ -1.24
NUP98-213ENST00000524563 FAM167AQ96KS9 214 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 ZNF558Q96NG5 402 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 CDCA3Q99618 268 aaPredicted RBP7.33□□□□□ -1.24
NUP98-213ENST00000524563 PRRX2Q99811 253 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 TCF25Q9BQ70 676 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 PHF7Q9BWX1 381 aaPredicted RBP7.33□□□□□ -1.24
NUP98-213ENST00000524563 ERVK-5Q9HDB9 667 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 KCNMB3Q9NPA1 279 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 TBC1D22BQ9NU19 505 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 HCSTQ9UBK5 93 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 DDX25Q9UHL0 483 aaKnown RBP7.33□□□□□ -1.24
NUP98-213ENST00000524563 PUF60Q9UHX1 559 aaKnown RBP7.33□□□□□ -1.24
NUP98-213ENST00000524563 CEP131Q9UPN4 1083 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 SMC3Q9UQE7 1217 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 NOC2LQ9Y3T9 749 aaKnown RBP7.33□□□□□ -1.24
NUP98-213ENST00000524563 TRIP11Q15643 1979 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 TCHHQ07283 1943 aa7.33□□□□□ -1.24
NUP98-213ENST00000524563 IGKV6D-21A0A0A0MT36 114 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 PSMD10O75832 226 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 GLP2RO95838 553 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 PSAPP07602 524 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 LINC00271P0C7V0 271 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 FGFR1P11362 822 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 ZSCAN20P17040 1043 aaPredicted RBP7.32□□□□□ -1.24
NUP98-213ENST00000524563 RFX1P22670 979 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 DNAJB1P25685 340 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 TMOD1P28289 359 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 CLCN3P51790 818 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 COASYQ13057 564 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 ADAM15Q13444 863 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 SMC1AQ14683 1233 aaKnown RBP7.32□□□□□ -1.24
NUP98-213ENST00000524563 SAFBQ15424 915 aaKnown RBP eCLIP7.32□□□□□ -1.24
NUP98-213ENST00000524563 DUSP6Q16828 381 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 TPRNQ4KMQ1 711 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 LRCH2Q5VUJ6 765 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 PDE12Q6L8Q7 609 aaKnown RBP7.32□□□□□ -1.24
NUP98-213ENST00000524563 CES5AQ6NT32 575 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 ZNF746Q6NUN9 644 aaPredicted RBP7.32□□□□□ -1.24
NUP98-213ENST00000524563 TRIM67Q6ZTA4 783 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 SLC24A5Q71RS6 500 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 FAM228AQ86W67 206 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 NLRP7Q8WX94 980 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 EDAQ92838 391 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 HAS1Q92839 578 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 MSLNLQ96KJ4 702 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 TEKT3Q9BXF9 490 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 TMEM117Q9H0C3 514 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 FOXP1Q9H334 677 aaPredicted RBP7.32□□□□□ -1.24
NUP98-213ENST00000524563 TMX1Q9H3N1 280 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 UNC45AQ9H3U1 944 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 MFSD1Q9H3U5 465 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 FAM86C1Q9NVL1 165 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 SEPT9Q9UHD8 586 aaPredicted RBP7.32□□□□□ -1.24
NUP98-213ENST00000524563 VAV3Q9UKW4 847 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 ST3GAL5Q9UNP4 418 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 NR2E1Q9Y466 385 aa7.32□□□□□ -1.24
NUP98-213ENST00000524563 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.31□□□□□ -1.24
NUP98-213ENST00000524563 WDR64B1ANS9 1081 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 CITO14578 2027 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 MGEA5O60502 916 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 GAS7O60861 476 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 ZC3H11AO75152 810 aaKnown RBP eCLIP7.31□□□□□ -1.24
NUP98-213ENST00000524563 BAG4O95429 457 aaKnown RBP7.31□□□□□ -1.24
NUP98-213ENST00000524563 EYA4O95677 639 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 GCFC2P16383 781 aaKnown RBP7.31□□□□□ -1.24
NUP98-213ENST00000524563 ATP4AP20648 1035 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 U2AF2P26368 475 aaKnown RBP eCLIP7.31□□□□□ -1.242e-9■■□□□ 14.3
NUP98-213ENST00000524563 PBX3P40426 434 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 ZXDAP98168 799 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 PRKCEQ02156 737 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms