RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 EEF2KMTQ96G04 330 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 PPP1R13BQ96KQ4 1090 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 C16orf45Q96MC5 204 aaPredicted RBP10.91□□□□□ -0.66
VPS13B-212ENST00000524330 FIZ1Q96SL8 496 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 LSM14BQ9BX40 385 aaKnown RBP10.91□□□□□ -0.66
VPS13B-212ENST00000524330 POLR3FQ9H1D9 316 aaPredicted RBP10.91□□□□□ -0.66
VPS13B-212ENST00000524330 C2orf40Q9H1Z8 148 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 PORCNQ9H237 461 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 NMRK2Q9NPI5 230 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 PLCB1Q9NQ66 1216 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 DMAC2Q9NW81 257 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 ZNF215Q9UL58 517 aaPredicted RBP10.91□□□□□ -0.66
VPS13B-212ENST00000524330 TBX20Q9UMR3 447 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 SIK3Q9Y2K2 1263 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 BZW2Q9Y6E2 419 aaKnown RBP10.91□□□□□ -0.66
VPS13B-212ENST00000524330 LCTP09848 1927 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 RBM47A0AV96 593 aaKnown RBP10.9□□□□□ -0.66
VPS13B-212ENST00000524330 ASAP2O43150 1006 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 KIF5CO60282 957 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 AKAP3O75969 853 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 STBD1O95210 358 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 ITGBL1O95965 494 aaPredicted RBP10.9□□□□□ -0.66
VPS13B-212ENST00000524330 LDHAP00338 332 aaKnown RBP10.9□□□□□ -0.66
VPS13B-212ENST00000524330 GARTP22102 1010 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 GRB14Q14449 540 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 MEA1Q16626 185 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 PTPN21Q16825 1174 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 LY6KQ17RY6 165 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 SLC9C1Q4G0N8 1177 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 BRDTQ58F21 947 aaPredicted RBP10.9□□□□□ -0.66
VPS13B-212ENST00000524330 ZNF484Q5JVG2 852 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 SFMBT2Q5VUG0 894 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 IQSEC1Q6DN90 963 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 MAMDC4Q6UXC1 1216 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 VPS36Q86VN1 386 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 TMEM139Q8IV31 216 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 FBXO16Q8IX29 292 aaPredicted RBP10.9□□□□□ -0.66
VPS13B-212ENST00000524330 REM2Q8IYK8 340 aaPredicted RBP10.9□□□□□ -0.66
VPS13B-212ENST00000524330 C17orf53Q8N3J3 647 aaPredicted RBP10.9□□□□□ -0.66
VPS13B-212ENST00000524330 ZNF526Q8TF50 670 aaPredicted RBP10.9□□□□□ -0.66
VPS13B-212ENST00000524330 ATP8B4Q8TF62 1192 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 KCNN1Q92952 543 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 EMID1Q96A84 441 aaPredicted RBP10.9□□□□□ -0.66
VPS13B-212ENST00000524330 CCDC42Q96M95 316 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 SPAG5Q96R06 1193 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 GPR20Q99678 358 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 TSGA10Q9BZW7 698 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 ABHD16BQ9H3Z7 469 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 DHX33Q9H6R0 707 aaKnown RBP10.9□□□□□ -0.66
VPS13B-212ENST00000524330 TMEM134Q9H6X4 195 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 FAM207AQ9NSI2 230 aaPredicted RBP10.9□□□□□ -0.66
VPS13B-212ENST00000524330 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.9□□□□□ -0.66
VPS13B-212ENST00000524330 ERAP1Q9NZ08 941 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 FBXL5Q9UKA1 691 aa10.9□□□□□ -0.66
VPS13B-212ENST00000524330 R3HCC1Q9Y3T6 440 aaKnown RBP10.9□□□□□ -0.66
VPS13B-212ENST00000524330 EPN1Q9Y6I3 576 aaPredicted RBP10.9□□□□□ -0.66
VPS13B-212ENST00000524330 ZNFX1Q9P2E3 1918 aaKnown RBP10.9□□□□□ -0.67
VPS13B-212ENST00000524330 PLXNB2O15031 1838 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 MAGEB2O15479 319 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 SORBS3O60504 671 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 PEX10O60683 326 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 MAFO75444 373 aaPredicted RBP10.89□□□□□ -0.67
VPS13B-212ENST00000524330 ALDH1A1P00352 501 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 ANXA13P27216 316 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 HNRNPH3P31942 346 aaKnown RBP10.89□□□□□ -0.67
VPS13B-212ENST00000524330 HOXD13P35453 343 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 LIG4P49917 911 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 GOLGA8FQ08AF8 430 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 GOLGA8DPQ0D2H9 430 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 BFSP1Q12934 665 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 CCDC62Q6P9F0 684 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 NYAP1Q6ZVC0 841 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 RRAGAQ7L523 313 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 KIAA1328Q86T90 577 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 SMC1BQ8NDV3 1235 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 TMEM161BQ8NDZ6 487 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 PSPC1Q8WXF1 523 aaKnown RBP10.89□□□□□ -0.67
VPS13B-212ENST00000524330 SOCS4Q8WXH5 440 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 ZNF592Q92610 1267 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 FAM81BQ96LP2 452 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 TTYH3Q9C0H2 523 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 POLD4Q9HCU8 107 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 PDLIM7Q9NR12 457 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 HSPBP1Q9NZL4 362 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 MYO1AQ9UBC5 1043 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 PLAGL2Q9UPG8 496 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 TRPC6Q9Y210 931 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 COL1A2P08123 1366 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 ZMYM2Q9UBW7 1377 aa10.89□□□□□ -0.67
VPS13B-212ENST00000524330 SSU72P8A0A1W2PR75 194 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 LRRIQ4A6NIV6 560 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 SOWAHDA6NJG2 315 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 EIF3CLB5ME19 914 aaKnown RBP10.88□□□□□ -0.67
VPS13B-212ENST00000524330 K7ERI5 159 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 SOCS7O14512 581 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 HNRNPDLO14979 420 aaKnown RBP10.88□□□□□ -0.67
VPS13B-212ENST00000524330 KRT86O43790 486 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 AKR1B10O60218 316 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 NDUFA10O95299 355 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 SLC10A3P09131 477 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms