RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 GEMIN8Q9NWZ8 242 aaKnown RBP7.61□□□□□ -1.19
SKP1-213ENST00000524288 HSPBP1Q9NZL4 362 aa7.61□□□□□ -1.19
SKP1-213ENST00000524288 ARHGAP28Q9P2N2 729 aa7.61□□□□□ -1.19
SKP1-213ENST00000524288 ANKRD6Q9Y2G4 727 aa7.61□□□□□ -1.19
SKP1-213ENST00000524288 GIT1Q9Y2X7 761 aa7.61□□□□□ -1.19
SKP1-213ENST00000524288 ARID4BQ4LE39 1312 aaPredicted RBP7.6□□□□□ -1.19
SKP1-213ENST00000524288 PRSS38A1L453 326 aa7.6□□□□□ -1.19
SKP1-213ENST00000524288 MROH6A6NGR9 719 aa7.6□□□□□ -1.19
SKP1-213ENST00000524288 PRPF6O94906 941 aaKnown RBP7.6□□□□□ -1.19
SKP1-213ENST00000524288 ZRANB2O95218 330 aaKnown RBP eCLIP7.6□□□□□ -1.19
SKP1-213ENST00000524288 ITGB3P05106 788 aa7.6□□□□□ -1.19
SKP1-213ENST00000524288 ENPP1P22413 925 aa7.6□□□□□ -1.19
SKP1-213ENST00000524288 AOAHP28039 575 aa7.6□□□□□ -1.19
SKP1-213ENST00000524288 KRTAP10-2P60368 255 aa7.6□□□□□ -1.19
SKP1-213ENST00000524288 SLC6A3Q01959 620 aa7.6□□□□□ -1.19
SKP1-213ENST00000524288 UGT8Q16880 541 aa7.6□□□□□ -1.19
SKP1-213ENST00000524288 ZNF827Q17R98 1081 aa7.6□□□□□ -1.19
SKP1-213ENST00000524288 MAP9Q49MG5 647 aa7.6□□□□□ -1.19
SKP1-213ENST00000524288 UNQ6494/PRO21346Q6UXR6 183 aa7.6□□□□□ -1.19
SKP1-213ENST00000524288 PHYKPLQ8IUZ5 450 aa7.6□□□□□ -1.19
SKP1-213ENST00000524288 CAMKK2Q96RR4 588 aa7.6□□□□□ -1.19
SKP1-213ENST00000524288 TMEM209Q96SK2 561 aa7.6□□□□□ -1.19
SKP1-213ENST00000524288 ANLNQ9NQW6 1124 aa7.6□□□□□ -1.19
SKP1-213ENST00000524288 BTBD7Q9P203 1132 aa7.6□□□□□ -1.19
SKP1-213ENST00000524288 GOLGA6L22H0YM25 854 aa7.59□□□□□ -1.19
SKP1-213ENST00000524288 LRG1P02750 347 aa7.59□□□□□ -1.19
SKP1-213ENST00000524288 RGS3P49796 1198 aa7.59□□□□□ -1.19
SKP1-213ENST00000524288 HERVK_113P62684 666 aa7.59□□□□□ -1.19
SKP1-213ENST00000524288 CCT2P78371 535 aaKnown RBP7.59□□□□□ -1.19
SKP1-213ENST00000524288 ADCY1Q08828 1119 aa7.59□□□□□ -1.19
SKP1-213ENST00000524288 DBPQ10586 325 aaPredicted RBP7.59□□□□□ -1.19
SKP1-213ENST00000524288 MYBPC3Q14896 1274 aa7.59□□□□□ -1.19
SKP1-213ENST00000524288 FSCN1Q16658 493 aaKnown RBP7.59□□□□□ -1.19
SKP1-213ENST00000524288 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.59□□□□□ -1.19
SKP1-213ENST00000524288 PITRM1Q5JRX3 1037 aa7.59□□□□□ -1.19
SKP1-213ENST00000524288 TTC38Q5R3I4 469 aa7.59□□□□□ -1.19
SKP1-213ENST00000524288 CD276Q5ZPR3 534 aa7.59□□□□□ -1.19
SKP1-213ENST00000524288 TEPPQ6URK8 271 aa7.59□□□□□ -1.19
SKP1-213ENST00000524288 PPM1NQ8N819 430 aa7.59□□□□□ -1.19
SKP1-213ENST00000524288 TXNDC5Q8NBS9 432 aaKnown RBP7.59□□□□□ -1.19
SKP1-213ENST00000524288 TTLL11Q8NHH1 800 aa7.59□□□□□ -1.19
SKP1-213ENST00000524288 CLIP3Q96DZ5 547 aa7.59□□□□□ -1.19
SKP1-213ENST00000524288 LCORQ96JN0 433 aaPredicted RBP7.59□□□□□ -1.19
SKP1-213ENST00000524288 CLIC6Q96NY7 704 aa7.59□□□□□ -1.19
SKP1-213ENST00000524288 USP36Q9P275 1121 aaKnown RBP7.59□□□□□ -1.19
SKP1-213ENST00000524288 KCNG1Q9UIX4 513 aa7.59□□□□□ -1.19
SKP1-213ENST00000524288 JAG2Q9Y219 1238 aa7.59□□□□□ -1.19
SKP1-213ENST00000524288 ASB1Q9Y576 335 aa7.59□□□□□ -1.19
SKP1-213ENST00000524288 GOLGA6CA6NDK9 693 aa7.58□□□□□ -1.2
SKP1-213ENST00000524288 GOLGA6BA6NDN3 693 aa7.58□□□□□ -1.2
SKP1-213ENST00000524288 PLATP00750 562 aa7.58□□□□□ -1.2
SKP1-213ENST00000524288 PRLP01236 227 aa7.58□□□□□ -1.2
SKP1-213ENST00000524288 GOLGA6DP0CG33 693 aa7.58□□□□□ -1.2
SKP1-213ENST00000524288 ZNF28P17035 718 aa7.58□□□□□ -1.2
SKP1-213ENST00000524288 C5AR1P21730 350 aa7.58□□□□□ -1.2
SKP1-213ENST00000524288 SURF1Q15526 300 aa7.58□□□□□ -1.2
SKP1-213ENST00000524288 GFOD2Q3B7J2 385 aa7.58□□□□□ -1.2
SKP1-213ENST00000524288 PHF19Q5T6S3 580 aa7.58□□□□□ -1.2
SKP1-213ENST00000524288 CXorf57Q6NSI4 855 aaKnown RBP7.58□□□□□ -1.2
SKP1-213ENST00000524288 LRSAM1Q6UWE0 723 aa7.58□□□□□ -1.2
SKP1-213ENST00000524288 TMC5Q6UXY8 1006 aa7.58□□□□□ -1.2
SKP1-213ENST00000524288 KSR2Q6VAB6 950 aa7.58□□□□□ -1.2
SKP1-213ENST00000524288 NME9Q86XW9 330 aa7.58□□□□□ -1.2
SKP1-213ENST00000524288 TTC9BQ8N6N2 239 aa7.58□□□□□ -1.2
SKP1-213ENST00000524288 TIFAQ96CG3 184 aa7.58□□□□□ -1.2
SKP1-213ENST00000524288 ORAI2Q96SN7 254 aa7.58□□□□□ -1.2
SKP1-213ENST00000524288 RBM15Q96T37 977 aaKnown RBP eCLIP7.58□□□□□ -1.22e-9■■■□□ 18.8
SKP1-213ENST00000524288 SYT3Q9BQG1 590 aa7.58□□□□□ -1.2
SKP1-213ENST00000524288 TCF7L1Q9HCS4 588 aa7.58□□□□□ -1.2
SKP1-213ENST00000524288 GOLGA6AQ9NYA3 693 aa7.58□□□□□ -1.2
SKP1-213ENST00000524288 GPR45Q9Y5Y3 372 aa7.58□□□□□ -1.2
SKP1-213ENST00000524288 DDX3XO00571 662 aaKnown RBP eCLIP7.57□□□□□ -1.2
SKP1-213ENST00000524288 AGXTP21549 392 aa7.57□□□□□ -1.2
SKP1-213ENST00000524288 MOGSQ13724 837 aa7.57□□□□□ -1.2
SKP1-213ENST00000524288 MCTP2Q6DN12 878 aa7.57□□□□□ -1.2
SKP1-213ENST00000524288 SLFN12LQ6IEE8 588 aa7.57□□□□□ -1.2
SKP1-213ENST00000524288 TIGD7Q6NT04 549 aaPredicted RBP7.57□□□□□ -1.2
SKP1-213ENST00000524288 EPM2AIP1Q7L775 607 aaPredicted RBP7.57□□□□□ -1.2
SKP1-213ENST00000524288 STK32CQ86UX6 486 aa7.57□□□□□ -1.2
SKP1-213ENST00000524288 MAML3Q96JK9 1138 aa7.57□□□□□ -1.2
SKP1-213ENST00000524288 KRTAP4-5Q9BYR2 181 aa7.57□□□□□ -1.2
SKP1-213ENST00000524288 KCTD10Q9H3F6 313 aa7.57□□□□□ -1.2
SKP1-213ENST00000524288 OBP2AQ9NY56 170 aa7.57□□□□□ -1.2
SKP1-213ENST00000524288 DPP7Q9UHL4 492 aa7.57□□□□□ -1.2
SKP1-213ENST00000524288 PNMA8BQ9ULN7 279 aaPredicted RBP7.57□□□□□ -1.2
SKP1-213ENST00000524288 ST20-MTHFSA0A0A6YYL1 179 aa7.56□□□□□ -1.2
SKP1-213ENST00000524288 CAND2O75155 1236 aa7.56□□□□□ -1.2
SKP1-213ENST00000524288 MPIG6BO95866 241 aa7.56□□□□□ -1.2
SKP1-213ENST00000524288 KRT18P05783 430 aaKnown RBP7.56□□□□□ -1.2
SKP1-213ENST00000524288 MYBP10242 640 aa7.56□□□□□ -1.2
SKP1-213ENST00000524288 PTGS1P23219 599 aa7.56□□□□□ -1.2
SKP1-213ENST00000524288 CYP2C19P33261 490 aa7.56□□□□□ -1.2
SKP1-213ENST00000524288 MAGEA10P43363 369 aaPredicted RBP7.56□□□□□ -1.2
SKP1-213ENST00000524288 MTNR1BP49286 362 aa7.56□□□□□ -1.2
SKP1-213ENST00000524288 LGALS4P56470 323 aa7.56□□□□□ -1.2
SKP1-213ENST00000524288 KRT85P78386 507 aa7.56□□□□□ -1.2
SKP1-213ENST00000524288 CDK17Q00537 523 aa7.56□□□□□ -1.2
SKP1-213ENST00000524288 ALDH6A1Q02252 535 aaKnown RBP7.56□□□□□ -1.2
SKP1-213ENST00000524288 ADCY2Q08462 1091 aa7.56□□□□□ -1.2
SKP1-213ENST00000524288 TRIM25Q14258 630 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms