RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 UBIAD1Q9Y5Z9 338 aa11.07□□□□□ -0.64
LAMA4-220ENST00000523765 B4GALT3O60512 393 aa11.06□□□□□ -0.64
LAMA4-220ENST00000523765 GPR32O75388 356 aa11.06□□□□□ -0.64
LAMA4-220ENST00000523765 VTNP04004 478 aa11.06□□□□□ -0.64
LAMA4-220ENST00000523765 PPM1AP35813 382 aa11.06□□□□□ -0.64
LAMA4-220ENST00000523765 BCAR1P56945 870 aa11.06□□□□□ -0.64
LAMA4-220ENST00000523765 UBE2SQ16763 222 aa11.06□□□□□ -0.64
LAMA4-220ENST00000523765 LETM2Q2VYF4 491 aa11.06□□□□□ -0.64
LAMA4-220ENST00000523765 CCDC178Q5BJE1 867 aa11.06□□□□□ -0.64
LAMA4-220ENST00000523765 KIAA0319Q5VV43 1072 aa11.06□□□□□ -0.64
LAMA4-220ENST00000523765 CABP7Q86V35 215 aa11.06□□□□□ -0.64
LAMA4-220ENST00000523765 ECHDC2Q86YB7 292 aa11.06□□□□□ -0.64
LAMA4-220ENST00000523765 PLEKHM2Q8IWE5 1019 aa11.06□□□□□ -0.64
LAMA4-220ENST00000523765 NME8Q8N427 588 aa11.06□□□□□ -0.64
LAMA4-220ENST00000523765 SMARCC2Q8TAQ2 1214 aa11.06□□□□□ -0.64
LAMA4-220ENST00000523765 OSBPL3Q9H4L5 887 aa11.06□□□□□ -0.64
LAMA4-220ENST00000523765 NCDNQ9UBB6 729 aa11.06□□□□□ -0.64
LAMA4-220ENST00000523765 SIT1Q9Y3P8 196 aa11.06□□□□□ -0.64
LAMA4-220ENST00000523765 ATRXP46100 2492 aa11.06□□□□□ -0.64
LAMA4-220ENST00000523765 KINO60870 393 aaKnown RBP11.05□□□□□ -0.64
LAMA4-220ENST00000523765 CDC45O75419 566 aa11.05□□□□□ -0.64
LAMA4-220ENST00000523765 RPLP2P05387 115 aaKnown RBP11.05□□□□□ -0.64
LAMA4-220ENST00000523765 FGFR4P22455 802 aa11.05□□□□□ -0.64
LAMA4-220ENST00000523765 PDE1AP54750 535 aa11.05□□□□□ -0.64
LAMA4-220ENST00000523765 ACTR2P61160 394 aa11.05□□□□□ -0.64
LAMA4-220ENST00000523765 ITGB3BPQ13352 177 aaPredicted RBP11.05□□□□□ -0.64
LAMA4-220ENST00000523765 MTMR1Q13613 665 aa11.05□□□□□ -0.64
LAMA4-220ENST00000523765 COL9A3Q14050 684 aaPredicted RBP11.05□□□□□ -0.64
LAMA4-220ENST00000523765 LONRF3Q496Y0 759 aa11.05□□□□□ -0.64
LAMA4-220ENST00000523765 TTC22Q5TAA0 569 aa11.05□□□□□ -0.64
LAMA4-220ENST00000523765 ZC3H14Q6PJT7 736 aaKnown RBP11.05□□□□□ -0.64
LAMA4-220ENST00000523765 CHAMP1Q96JM3 812 aa11.05□□□□□ -0.64
LAMA4-220ENST00000523765 SFXN1Q9H9B4 322 aa11.05□□□□□ -0.64
LAMA4-220ENST00000523765 ZSWIM6Q9HCJ5 1215 aa11.05□□□□□ -0.64
LAMA4-220ENST00000523765 JPH1Q9HDC5 661 aaPredicted RBP11.05□□□□□ -0.64
LAMA4-220ENST00000523765 IGSF9Q9P2J2 1179 aa11.05□□□□□ -0.64
LAMA4-220ENST00000523765 SLC9A2Q9UBY0 812 aa11.05□□□□□ -0.64
LAMA4-220ENST00000523765 MTF2Q9Y483 593 aaPredicted RBP11.05□□□□□ -0.64
LAMA4-220ENST00000523765 MEIS3P2A8K0S8 358 aa11.04□□□□□ -0.64
LAMA4-220ENST00000523765 PIK3CDO00329 1044 aa11.04□□□□□ -0.64
LAMA4-220ENST00000523765 GPR182O15218 404 aa11.04□□□□□ -0.64
LAMA4-220ENST00000523765 CTSAP10619 480 aa11.04□□□□□ -0.64
LAMA4-220ENST00000523765 ATP4AP20648 1035 aa11.04□□□□□ -0.64
LAMA4-220ENST00000523765 RFX1P22670 979 aa11.04□□□□□ -0.64
LAMA4-220ENST00000523765 GBP2P32456 591 aaPredicted RBP11.04□□□□□ -0.64
LAMA4-220ENST00000523765 STAT5BP51692 787 aa11.04□□□□□ -0.64
LAMA4-220ENST00000523765 CLCN4P51793 760 aa11.04□□□□□ -0.64
LAMA4-220ENST00000523765 CRYBB1P53674 252 aaPredicted RBP11.04□□□□□ -0.64
LAMA4-220ENST00000523765 FOXK1P85037 733 aa11.04□□□□□ -0.64
LAMA4-220ENST00000523765 PTPN14Q15678 1187 aa11.04□□□□□ -0.64
LAMA4-220ENST00000523765 PLPPR4Q7Z2D5 763 aa11.04□□□□□ -0.64
LAMA4-220ENST00000523765 ZNF598Q86UK7 904 aaKnown RBP11.04□□□□□ -0.64
LAMA4-220ENST00000523765 PJA1Q8NG27 643 aa11.04□□□□□ -0.64
LAMA4-220ENST00000523765 KLHL5Q96PQ7 755 aa11.04□□□□□ -0.64
LAMA4-220ENST00000523765 UBAC1Q9BSL1 405 aa11.04□□□□□ -0.64
LAMA4-220ENST00000523765 RPP25Q9BUL9 199 aaKnown RBP11.04□□□□□ -0.64
LAMA4-220ENST00000523765 IL25Q9H293 177 aa11.04□□□□□ -0.64
LAMA4-220ENST00000523765 JADE2Q9NQC1 790 aa11.04□□□□□ -0.64
LAMA4-220ENST00000523765 ARHGEF3Q9NR81 526 aa11.04□□□□□ -0.64
LAMA4-220ENST00000523765 DNAJB4Q9UDY4 337 aa11.04□□□□□ -0.64
LAMA4-220ENST00000523765 CDV3Q9UKY7 258 aaKnown RBP11.04□□□□□ -0.64
LAMA4-220ENST00000523765 IRAK3Q9Y616 596 aa11.04□□□□□ -0.64
LAMA4-220ENST00000523765 TAF6LQ9Y6J9 622 aa11.04□□□□□ -0.64
LAMA4-220ENST00000523765 WDR81Q562E7 1941 aa11.03□□□□□ -0.64
LAMA4-220ENST00000523765 ZC3H11AO75152 810 aaKnown RBP eCLIP11.03□□□□□ -0.64
LAMA4-220ENST00000523765 CSDE1O75534 798 aaKnown RBP11.03□□□□□ -0.64
LAMA4-220ENST00000523765 RFPL2O75678 378 aa11.03□□□□□ -0.64
LAMA4-220ENST00000523765 C22orf31O95567 290 aa11.03□□□□□ -0.64
LAMA4-220ENST00000523765 CCNE2O96020 404 aa11.03□□□□□ -0.64
LAMA4-220ENST00000523765 SSBP05455 408 aaKnown RBP eCLIP11.03□□□□□ -0.64
LAMA4-220ENST00000523765 CNPP09543 421 aaKnown RBP11.03□□□□□ -0.64
LAMA4-220ENST00000523765 SRFP11831 508 aa11.03□□□□□ -0.64
LAMA4-220ENST00000523765 RBM25P49756 843 aaKnown RBP11.03□□□□□ -0.64
LAMA4-220ENST00000523765 TROAPQ12815 778 aa11.03□□□□□ -0.64
LAMA4-220ENST00000523765 PPM1JQ5JR12 505 aa11.03□□□□□ -0.64
LAMA4-220ENST00000523765 PHLDB3Q6NSJ2 640 aa11.03□□□□□ -0.64
LAMA4-220ENST00000523765 TSSK4Q6SA08 328 aa11.03□□□□□ -0.64
LAMA4-220ENST00000523765 CASC1Q6TDU7 716 aa11.03□□□□□ -0.64
LAMA4-220ENST00000523765 CCDC60Q8IWA6 550 aaPredicted RBP11.03□□□□□ -0.64
LAMA4-220ENST00000523765 ABI1Q8IZP0 508 aa11.03□□□□□ -0.64
LAMA4-220ENST00000523765 LPPQ93052 612 aa11.03□□□□□ -0.64
LAMA4-220ENST00000523765 TMEM169Q96HH4 297 aa11.03□□□□□ -0.64
LAMA4-220ENST00000523765 IGSF21Q96ID5 467 aa11.03□□□□□ -0.64
LAMA4-220ENST00000523765 LARP6Q9BRS8 491 aaKnown RBP11.03□□□□□ -0.64
LAMA4-220ENST00000523765 C22orf23Q9BZE7 217 aa11.03□□□□□ -0.64
LAMA4-220ENST00000523765 AZI2Q9H6S1 392 aa11.03□□□□□ -0.64
LAMA4-220ENST00000523765 KCNH7Q9NS40 1196 aa11.03□□□□□ -0.64
LAMA4-220ENST00000523765 SMG5Q9UPR3 1016 aaKnown RBP11.03□□□□□ -0.64
LAMA4-220ENST00000523765 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.03□□□□□ -0.64
LAMA4-220ENST00000523765 DOCK6Q96HP0 2047 aa11.02□□□□□ -0.64
LAMA4-220ENST00000523765 IGKV6D-21A0A0A0MT36 114 aa11.02□□□□□ -0.65
LAMA4-220ENST00000523765 DDX39AO00148 427 aaKnown RBP11.02□□□□□ -0.65
LAMA4-220ENST00000523765 ATG7O95352 703 aa11.02□□□□□ -0.65
LAMA4-220ENST00000523765 SDSP20132 328 aa11.02□□□□□ -0.65
LAMA4-220ENST00000523765 CSTF1Q05048 431 aaKnown RBP11.02□□□□□ -0.65
LAMA4-220ENST00000523765 MMRN1Q13201 1228 aa11.02□□□□□ -0.65
LAMA4-220ENST00000523765 ARSIQ5FYB1 569 aa11.02□□□□□ -0.65
LAMA4-220ENST00000523765 DCLRE1AQ6PJP8 1040 aa11.02□□□□□ -0.65
LAMA4-220ENST00000523765 TRMT1LQ7Z2T5 733 aaKnown RBP11.02□□□□□ -0.65
LAMA4-220ENST00000523765 DDX53Q86TM3 631 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms