RNA–Protein interactions for RNA: ENST00000523613.5

HMBOX1-210, Transcript of homeobox containing 1, humanhuman

TSL 1 (best) BASIC

Gene HMBOX1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-210ENST00000523613 TMEM206Q9H813 350 aa16.58■□□□□ 0.24
HMBOX1-210ENST00000523613 XPNPEP3Q9NQH7 507 aa16.58■□□□□ 0.24
HMBOX1-210ENST00000523613 IFNKQ9P0W0 207 aa16.58■□□□□ 0.24
HMBOX1-210ENST00000523613 TRAF3IP3Q9Y228 551 aa16.58■□□□□ 0.24
HMBOX1-210ENST00000523613 RRN3P2A6NIE6 340 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 KCNJ18B7U540 433 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 CBFA2T2O43439 604 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 PGK1P00558 417 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 INHAP05111 366 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 SCP2P22307 547 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 GLRA2P23416 452 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 KLRC1P26715 233 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 GRK4P32298 578 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 PSEN2P49810 448 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 KCNA1Q09470 495 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 KCNJ12Q14500 433 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 MXD4Q14582 209 aaPredicted RBP16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 GRIK4Q16099 956 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 EFCAB12Q6NXP0 572 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 HS2ST1Q7LGA3 356 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 CREBRFQ8IUR6 639 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 KSR1Q8IVT5 923 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 LRRC71Q8N4P6 559 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 METTL13Q8N6R0 699 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 TMEM161BQ8NDZ6 487 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 DEPTORQ8TB45 409 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 KAT2BQ92831 832 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 EXOC7Q9UPT5 735 aa16.57■□□□□ 0.24
HMBOX1-210ENST00000523613 DENND3A2RUS2 1198 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 MYADML2A6NDP7 307 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 LRRIQ4A6NIV6 560 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 EEF1GP26641 437 aaKnown RBP16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 UBASH3AP57075 661 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 NKX3-2P78367 333 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 PURAQ00577 322 aaKnown RBP16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 TCP11X2Q5H9J9 407 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 GOLGA5Q8TBA6 731 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 PRPF31Q8WWY3 499 aaKnown RBP16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 CEP63Q96MT8 703 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 CTAGE1Q96RT6 745 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 KIFC3Q9BVG8 833 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 GBP3Q9H0R5 595 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 SUCLA2Q9P2R7 463 aaPredicted RBP16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 DDX20Q9UHI6 824 aaKnown RBP16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 PTCH2Q9Y6C5 1203 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 ZMYM2Q9UBW7 1377 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 HAS3O00219 553 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 TPM3P06753 285 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 SMIM10L2AP0DMW4 78 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 SMIM10L2BP0DMW5 78 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 RPL13P26373 211 aaKnown RBP16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 TMOD1P28289 359 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 DRP2Q13474 957 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 MTHFD1LQ6UB35 978 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 LRRC55Q6ZSA7 311 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 MRFAP1L1Q96HT8 127 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 MTG1Q9BT17 334 aaPredicted RBP16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 ARHGAP28Q9P2N2 729 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 LIMA1Q9UHB6 759 aaKnown RBP16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 TBX20Q9UMR3 447 aa16.56■□□□□ 0.24
HMBOX1-210ENST00000523613 NRCAMQ92823 1304 aa16.55■□□□□ 0.24
HMBOX1-210ENST00000523613 CETN3O15182 167 aa16.55■□□□□ 0.24
HMBOX1-210ENST00000523613 TGFB1I1O43294 461 aa16.55■□□□□ 0.24
HMBOX1-210ENST00000523613 MSCO60682 206 aa16.55■□□□□ 0.24
HMBOX1-210ENST00000523613 NR2F2P24468 414 aa16.55■□□□□ 0.24
HMBOX1-210ENST00000523613 CLCN3P51790 818 aa16.55■□□□□ 0.24
HMBOX1-210ENST00000523613 LAMTOR4Q0VGL1 99 aa16.55■□□□□ 0.24
HMBOX1-210ENST00000523613 MKRN4PQ13434 485 aaPredicted RBP16.55■□□□□ 0.24
HMBOX1-210ENST00000523613 ADAM9Q13443 819 aa16.55■□□□□ 0.24
HMBOX1-210ENST00000523613 TFDP1Q14186 410 aa16.55■□□□□ 0.24
HMBOX1-210ENST00000523613 FILIP1LQ4L180 1135 aa16.55■□□□□ 0.24
HMBOX1-210ENST00000523613 IRF2BP1Q8IU81 584 aa16.55■□□□□ 0.24
HMBOX1-210ENST00000523613 EEF2KMTQ96G04 330 aa16.55■□□□□ 0.24
HMBOX1-210ENST00000523613 CNOT6LQ96LI5 555 aaKnown RBP16.55■□□□□ 0.24
HMBOX1-210ENST00000523613 XPO4Q9C0E2 1151 aaKnown RBP16.55■□□□□ 0.24
HMBOX1-210ENST00000523613 HMX1Q9NP08 348 aaPredicted RBP16.55■□□□□ 0.24
HMBOX1-210ENST00000523613 SETD4Q9NVD3 440 aa16.55■□□□□ 0.24
HMBOX1-210ENST00000523613 ADGRA3Q8IWK6 1321 aa16.54■□□□□ 0.24
HMBOX1-210ENST00000523613 ASAP2O43150 1006 aa16.54■□□□□ 0.24
HMBOX1-210ENST00000523613 ADAMTS4O75173 837 aa16.54■□□□□ 0.24
HMBOX1-210ENST00000523613 GNA14O95837 355 aa16.54■□□□□ 0.24
HMBOX1-210ENST00000523613 NR3C1P04150 777 aa16.54■□□□□ 0.24
HMBOX1-210ENST00000523613 MYCNP04198 464 aaPredicted RBP16.54■□□□□ 0.24
HMBOX1-210ENST00000523613 TPM2P07951 284 aa16.54■□□□□ 0.24
HMBOX1-210ENST00000523613 STRN3Q13033 797 aa16.54■□□□□ 0.24
HMBOX1-210ENST00000523613 CAPSQ13938 189 aa16.54■□□□□ 0.24
HMBOX1-210ENST00000523613 KRT31Q15323 416 aa16.54■□□□□ 0.24
HMBOX1-210ENST00000523613 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.54■□□□□ 0.24
HMBOX1-210ENST00000523613 RHPN2Q8IUC4 686 aa16.54■□□□□ 0.24
HMBOX1-210ENST00000523613 ZC3H3Q8IXZ2 948 aaKnown RBP16.54■□□□□ 0.24
HMBOX1-210ENST00000523613 LMBR1Q8WVP7 490 aa16.54■□□□□ 0.24
HMBOX1-210ENST00000523613 ZBTB10Q96DT7 871 aa16.54■□□□□ 0.24
HMBOX1-210ENST00000523613 PDLIM2Q96JY6 352 aa16.54■□□□□ 0.24
HMBOX1-210ENST00000523613 PPP1R9BQ96SB3 815 aa16.54■□□□□ 0.24
HMBOX1-210ENST00000523613 CGNQ9P2M7 1197 aaKnown RBP16.54■□□□□ 0.24
HMBOX1-210ENST00000523613 CST5P28325 142 aaPredicted RBP16.53■□□□□ 0.24
HMBOX1-210ENST00000523613 CDC25BP30305 580 aa16.53■□□□□ 0.24
HMBOX1-210ENST00000523613 MTIF2P46199 727 aaKnown RBP16.53■□□□□ 0.24
HMBOX1-210ENST00000523613 SNRPFP62306 86 aaKnown RBP16.53■□□□□ 0.24
HMBOX1-210ENST00000523613 NFIL3Q16649 462 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms