RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 WDR92Q96MX6 357 aa6.93□□□□□ -1.3
SKP1-208ENST00000521216 CCM2LQ9NUG4 571 aaPredicted RBP6.93□□□□□ -1.3
SKP1-208ENST00000521216 TYW1Q9NV66 732 aaKnown RBP6.93□□□□□ -1.3
SKP1-208ENST00000521216 ADAMTS20P59510 1910 aa6.92□□□□□ -1.3
SKP1-208ENST00000521216 CFBP00751 764 aa6.92□□□□□ -1.3
SKP1-208ENST00000521216 CELA3BP08861 270 aa6.92□□□□□ -1.3
SKP1-208ENST00000521216 HNRNPLP14866 589 aaKnown RBP eCLIP6.92□□□□□ -1.38e-9■□□□□ 9.2
SKP1-208ENST00000521216 SPIDRQ14159 915 aa6.92□□□□□ -1.3
SKP1-208ENST00000521216 TRIM68Q6AZZ1 485 aa6.92□□□□□ -1.3
SKP1-208ENST00000521216 KLHDC10Q6PID8 442 aa6.92□□□□□ -1.3
SKP1-208ENST00000521216 SIAH1Q8IUQ4 282 aa6.92□□□□□ -1.3
SKP1-208ENST00000521216 CBARPQ8N350 705 aaPredicted RBP6.92□□□□□ -1.3
SKP1-208ENST00000521216 OR14C36Q8NHC7 312 aa6.92□□□□□ -1.3
SKP1-208ENST00000521216 MBD6Q96DN6 1003 aa6.92□□□□□ -1.3
SKP1-208ENST00000521216 FUBP3Q96I24 572 aaKnown RBP eCLIP6.92□□□□□ -1.3
SKP1-208ENST00000521216 FAXDC2Q96IV6 333 aa6.92□□□□□ -1.3
SKP1-208ENST00000521216 PUS7Q96PZ0 661 aaKnown RBP6.92□□□□□ -1.3
SKP1-208ENST00000521216 SHTN1A0MZ66 631 aa6.91□□□□□ -1.3
SKP1-208ENST00000521216 DAPK3O43293 454 aa6.91□□□□□ -1.3
SKP1-208ENST00000521216 XPOTO43592 962 aaKnown RBP6.91□□□□□ -1.3
SKP1-208ENST00000521216 OSMP13725 252 aa6.91□□□□□ -1.3
SKP1-208ENST00000521216 ZMAT1Q5H9K5 638 aa6.91□□□□□ -1.3
SKP1-208ENST00000521216 LMBR1LQ6UX01 489 aa6.91□□□□□ -1.3
SKP1-208ENST00000521216 GAREM2Q75VX8 874 aa6.91□□□□□ -1.3
SKP1-208ENST00000521216 PNMA8AQ86V59 439 aaPredicted RBP6.91□□□□□ -1.3
SKP1-208ENST00000521216 LYSMD2Q8IV50 215 aa6.91□□□□□ -1.3
SKP1-208ENST00000521216 C1orf162Q8NEQ5 155 aaPredicted RBP6.91□□□□□ -1.3
SKP1-208ENST00000521216 RSAD2Q8WXG1 361 aa6.91□□□□□ -1.3
SKP1-208ENST00000521216 AUTS2Q8WXX7 1259 aa6.91□□□□□ -1.3
SKP1-208ENST00000521216 RBM8AQ9Y5S9 174 aaKnown RBP6.91□□□□□ -1.3
SKP1-208ENST00000521216 TNKSO95271 1327 aa6.91□□□□□ -1.3
SKP1-208ENST00000521216 A0A0A6YYK5 440 aaPredicted RBP6.9□□□□□ -1.3
SKP1-208ENST00000521216 OTOL1A6NHN0 477 aaPredicted RBP6.9□□□□□ -1.3
SKP1-208ENST00000521216 NRP2O60462 931 aa6.9□□□□□ -1.3
SKP1-208ENST00000521216 B4GALT3O60512 393 aa6.9□□□□□ -1.3
SKP1-208ENST00000521216 MTHFD2P13995 350 aa6.9□□□□□ -1.3
SKP1-208ENST00000521216 NRG3P56975 720 aa6.9□□□□□ -1.3
SKP1-208ENST00000521216 SESN2P58004 480 aaPredicted RBP6.9□□□□□ -1.3
SKP1-208ENST00000521216 MGAT5Q09328 741 aa6.9□□□□□ -1.3
SKP1-208ENST00000521216 PCBP2Q15366 365 aaKnown RBP eCLIP6.9□□□□□ -1.3
SKP1-208ENST00000521216 INAVAQ3KP66 663 aa6.9□□□□□ -1.3
SKP1-208ENST00000521216 AGBL4Q5VU57 503 aa6.9□□□□□ -1.3
SKP1-208ENST00000521216 LGI4Q8N135 537 aa6.9□□□□□ -1.3
SKP1-208ENST00000521216 OR14K1Q8NGZ2 314 aa6.9□□□□□ -1.3
SKP1-208ENST00000521216 GCDHQ92947 438 aaPredicted RBP6.9□□□□□ -1.3
SKP1-208ENST00000521216 GFM2Q969S9 779 aaKnown RBP6.9□□□□□ -1.3
SKP1-208ENST00000521216 SLC2A13Q96QE2 648 aa6.9□□□□□ -1.3
SKP1-208ENST00000521216 ORAI2Q96SN7 254 aa6.9□□□□□ -1.3
SKP1-208ENST00000521216 SOX7Q9BT81 388 aa6.9□□□□□ -1.3
SKP1-208ENST00000521216 OR10A2Q9H208 303 aa6.9□□□□□ -1.3
SKP1-208ENST00000521216 JADE2Q9NQC1 790 aa6.9□□□□□ -1.3
SKP1-208ENST00000521216 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.9□□□□□ -1.3
SKP1-208ENST00000521216 EVLQ9UI08 416 aaPredicted RBP6.9□□□□□ -1.3
SKP1-208ENST00000521216 INVSQ9Y283 1065 aa6.9□□□□□ -1.3
SKP1-208ENST00000521216 VWA7Q9Y334 891 aa6.9□□□□□ -1.3
SKP1-208ENST00000521216 NR2E1Q9Y466 385 aa6.9□□□□□ -1.3
SKP1-208ENST00000521216 MRFAP1Q9Y605 127 aa6.9□□□□□ -1.3
SKP1-208ENST00000521216 CDY2AQ9Y6F7 541 aa6.9□□□□□ -1.3
SKP1-208ENST00000521216 ALDH1L1O75891 902 aa6.89□□□□□ -1.31
SKP1-208ENST00000521216 FSBPO95073 299 aa6.89□□□□□ -1.31
SKP1-208ENST00000521216 CNR2P34972 360 aa6.89□□□□□ -1.31
SKP1-208ENST00000521216 GPR15P49685 360 aa6.89□□□□□ -1.31
SKP1-208ENST00000521216 MRPS9P82933 396 aaKnown RBP6.89□□□□□ -1.31
SKP1-208ENST00000521216 CD69Q07108 199 aa6.89□□□□□ -1.31
SKP1-208ENST00000521216 MAN2A1Q16706 1144 aa6.89□□□□□ -1.31
SKP1-208ENST00000521216 USP30Q70CQ3 517 aa6.89□□□□□ -1.31
SKP1-208ENST00000521216 ZBTB46Q86UZ6 589 aa6.89□□□□□ -1.31
SKP1-208ENST00000521216 PPM1NQ8N819 430 aa6.89□□□□□ -1.31
SKP1-208ENST00000521216 NKD2Q969F2 451 aaPredicted RBP6.89□□□□□ -1.31
SKP1-208ENST00000521216 KCNC2Q96PR1 638 aa6.89□□□□□ -1.31
SKP1-208ENST00000521216 UIMC1Q96RL1 719 aa6.89□□□□□ -1.31
SKP1-208ENST00000521216 KRTAP4-8Q9BYQ9 185 aa6.89□□□□□ -1.31
SKP1-208ENST00000521216 IFT122Q9HBG6 1241 aa6.89□□□□□ -1.31
SKP1-208ENST00000521216 GPR45Q9Y5Y3 372 aa6.89□□□□□ -1.31
SKP1-208ENST00000521216 ZNF536O15090 1300 aa6.88□□□□□ -1.31
SKP1-208ENST00000521216 KLHL33A6NCF5 533 aa6.88□□□□□ -1.31
SKP1-208ENST00000521216 S100BP04271 92 aaPredicted RBP6.88□□□□□ -1.31
SKP1-208ENST00000521216 JAG1P78504 1218 aa6.88□□□□□ -1.31
SKP1-208ENST00000521216 ACAP1Q15027 740 aa6.88□□□□□ -1.31
SKP1-208ENST00000521216 TBR1Q16650 682 aa6.88□□□□□ -1.31
SKP1-208ENST00000521216 MUM1Q2TAK8 710 aa6.88□□□□□ -1.31
SKP1-208ENST00000521216 PLEKHG6Q3KR16 790 aa6.88□□□□□ -1.31
SKP1-208ENST00000521216 ODR4Q5SWX8 454 aa6.88□□□□□ -1.31
SKP1-208ENST00000521216 ARHGEF18Q6ZSZ5 1173 aa6.88□□□□□ -1.31
SKP1-208ENST00000521216 KCNK18Q7Z418 384 aa6.88□□□□□ -1.31
SKP1-208ENST00000521216 PLEKHH3Q7Z736 793 aa6.88□□□□□ -1.31
SKP1-208ENST00000521216 SLC41A1Q8IVJ1 513 aa6.88□□□□□ -1.31
SKP1-208ENST00000521216 GLB1L2Q8IW92 636 aa6.88□□□□□ -1.31
SKP1-208ENST00000521216 FDXACB1Q9BRP7 624 aaPredicted RBP6.88□□□□□ -1.31
SKP1-208ENST00000521216 ACE2Q9BYF1 805 aaPredicted RBP6.88□□□□□ -1.31
SKP1-208ENST00000521216 HAPLN2Q9GZV7 340 aa6.88□□□□□ -1.31
SKP1-208ENST00000521216 ADAM7Q9H2U9 754 aa6.88□□□□□ -1.31
SKP1-208ENST00000521216 C12orf65Q9H3J6 166 aaKnown RBP6.88□□□□□ -1.31
SKP1-208ENST00000521216 PARD6AQ9NPB6 346 aa6.88□□□□□ -1.31
SKP1-208ENST00000521216 AASDHPPTQ9NRN7 309 aa6.88□□□□□ -1.31
SKP1-208ENST00000521216 ZBTB21Q9ULJ3 1066 aa6.88□□□□□ -1.31
SKP1-208ENST00000521216 DUSP10Q9Y6W6 482 aa6.88□□□□□ -1.31
SKP1-208ENST00000521216 C2orf78A6NCI8 922 aa6.87□□□□□ -1.31
SKP1-208ENST00000521216 TRIM75PA6NK02 468 aa6.87□□□□□ -1.31
SKP1-208ENST00000521216 SNUPNO95149 360 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms