RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 SUCLA2Q9P2R7 463 aaPredicted RBP9.87□□□□□ -0.83
CSMD1-208ENST00000520561 EXOC7Q9UPT5 735 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 FSD2A1L4K1 749 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 SLC16A4O15374 487 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 ASAP2O43150 1006 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 CALUO43852 315 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-208ENST00000520561 PRPF6O94906 941 aaKnown RBP9.86□□□□□ -0.83
CSMD1-208ENST00000520561 MYCP01106 439 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-208ENST00000520561 CYP2C9P11712 490 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 GLRA2P23416 452 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 CASP5P51878 434 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 ACLYP53396 1101 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 LRRC63Q05C16 580 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 CAPSQ13938 189 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 IQCB1Q15051 598 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 MTFR1Q15390 333 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 NBPF20Q3BBV1 942 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 CCSAPQ6IQ19 270 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-208ENST00000520561 PPP4R3CPQ6ZMV5 832 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 EPM2AIP1Q7L775 607 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-208ENST00000520561 ZNF720Q7Z2F6 126 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 HAUS6Q7Z4H7 955 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 RHPN2Q8IUC4 686 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 ZBTB8OSQ8IWT0 167 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 DHX40Q8IX18 779 aaKnown RBP9.86□□□□□ -0.83
CSMD1-208ENST00000520561 LINC01465Q8N7H1 131 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 GLIS3Q8NEA6 775 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 ZNF507Q8TCN5 953 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 SCFD1Q8WVM8 642 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 VTI1AQ96AJ9 217 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 NLRP4Q96MN2 994 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 SCLT1Q96NL6 688 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 DEFB118Q96PH6 123 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 ACCSQ96QU6 501 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 FIZ1Q96SL8 496 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 C2orf40Q9H1Z8 148 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 ST6GALNAC4Q9H4F1 302 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 TMEM206Q9H813 350 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 GRPEL1Q9HAV7 217 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 HDAC6Q9UBN7 1215 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 AKT3Q9Y243 479 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 SCN10AQ9Y5Y9 1956 aa9.86□□□□□ -0.83
CSMD1-208ENST00000520561 DENND3A2RUS2 1198 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 MBLAC1A4D2B0 266 aaPredicted RBP9.85□□□□□ -0.83
CSMD1-208ENST00000520561 TRIM49BA6NDI0 452 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 DNM1LO00429 736 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 PPP1R37O75864 691 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 FGFR1OPO95684 399 aaKnown RBP9.85□□□□□ -0.83
CSMD1-208ENST00000520561 PHKA2P46019 1235 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 MRE11P49959 708 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 PTPN11Q06124 597 aaPredicted RBP9.85□□□□□ -0.83
CSMD1-208ENST00000520561 LAMTOR4Q0VGL1 99 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 STRN3Q13033 797 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 DRP2Q13474 957 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 KNOP1Q1ED39 458 aaKnown RBP9.85□□□□□ -0.83
CSMD1-208ENST00000520561 UVSSAQ2YD98 709 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 ZC2HC1CQ53FD0 456 aaPredicted RBP9.85□□□□□ -0.83
CSMD1-208ENST00000520561 MARCH8Q5T0T0 291 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 SPATA1Q5VX52 437 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 CENPPQ6IPU0 288 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 FOXR2Q6PJQ5 311 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 HS2ST1Q7LGA3 356 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 SESTD1Q86VW0 696 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 SYCP3Q8IZU3 236 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 RNF149Q8NC42 400 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 TMEM161BQ8NDZ6 487 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 GOLGA5Q8TBA6 731 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 NOC3LQ8WTT2 800 aaKnown RBP9.85□□□□□ -0.83
CSMD1-208ENST00000520561 PRPF31Q8WWY3 499 aaKnown RBP9.85□□□□□ -0.83
CSMD1-208ENST00000520561 ARMC5Q96C12 935 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 ZBTB10Q96DT7 871 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 ZNF333Q96JL9 665 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 KIFC3Q9BVG8 833 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 STARD7Q9NQZ5 370 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 TYW1Q9NV66 732 aaKnown RBP9.85□□□□□ -0.83
CSMD1-208ENST00000520561 ARHGAP28Q9P2N2 729 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 GTF2IRD1Q9UHL9 959 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 PHF24Q9UPV7 400 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 NFE2L3Q9Y4A8 694 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 ZMYM2Q9UBW7 1377 aa9.85□□□□□ -0.83
CSMD1-208ENST00000520561 ADGRA3Q8IWK6 1321 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 SIP14410 1827 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 A0A0U1RQG5 324 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-208ENST00000520561 SMIM35A0A1B0GVV1 85 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 A0A1W2PQ45 241 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-208ENST00000520561 A0A1W2PQY0 241 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 M0QZ92 97 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 TREHO43280 583 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 RPLP2P05387 115 aaKnown RBP9.84□□□□□ -0.83
CSMD1-208ENST00000520561 HOXC8P31273 242 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 EFNA5P52803 228 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 GTF2BQ00403 316 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 CDC42EP1Q00587 391 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 SPAG1Q07617 926 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 MKRN4PQ13434 485 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-208ENST00000520561 ITGA7Q13683 1181 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 NCAPHQ15003 741 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 CDCA2Q69YH5 1023 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-208ENST00000520561 TTI2Q6NXR4 508 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 TAF2Q6P1X5 1199 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms