RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 TTLL1O95922 423 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 CYP3A7P24462 503 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 CYLC1P35663 651 aaPredicted RBP5.6□□□□□ -1.51
SDC2-204ENST00000519914 SCNN1AP37088 669 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 CCT6AP40227 531 aaKnown RBP5.6□□□□□ -1.51
SDC2-204ENST00000519914 ADCY7P51828 1080 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 CHMP4BP1P59074 171 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 KRT83P78385 493 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 HDLBPQ00341 1268 aaKnown RBP5.6□□□□□ -1.51
SDC2-204ENST00000519914 SETQ01105 290 aaPredicted RBP5.6□□□□□ -1.51
SDC2-204ENST00000519914 UBXN1Q04323 297 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 LRRC63Q05C16 580 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 ITIH3Q06033 890 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 DDR1Q08345 913 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 ZNF543Q08ER8 600 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 TMEM266Q2M3C6 531 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 MFSD14BQ5SR56 506 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 GPATCH4Q5T3I0 446 aaKnown RBP5.6□□□□□ -1.51
SDC2-204ENST00000519914 TTC39BQ5VTQ0 682 aaPredicted RBP5.6□□□□□ -1.51
SDC2-204ENST00000519914 WDR93Q6P2C0 686 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 C16orf46Q6P387 395 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 ACAD11Q709F0 780 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 SV2BQ7L1I2 683 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 SLC51AQ86UW1 340 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 SLC35F6Q8N357 371 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 KIAA0895Q8NCT3 520 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 ACRBPQ8NEB7 543 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 GPR152Q8TDT2 470 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 PIK3R5Q8WYR1 880 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 RAD54LQ92698 747 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 STAMQ92783 540 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 CALML4Q96GE6 196 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 RPGRIP1Q96KN7 1286 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 CNOT6LQ96LI5 555 aaKnown RBP5.6□□□□□ -1.51
SDC2-204ENST00000519914 CCDC17Q96LX7 622 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 PIGSQ96S52 555 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 TUBGCP2Q9BSJ2 902 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 PARD6BQ9BYG5 372 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 RAB34Q9BZG1 259 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 VPS16Q9H269 839 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 ANKZF1Q9H8Y5 726 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 MAGEC2Q9UBF1 373 aaPredicted RBP5.6□□□□□ -1.51
SDC2-204ENST00000519914 ZHX1Q9UKY1 873 aaPredicted RBP5.6□□□□□ -1.51
SDC2-204ENST00000519914 STX8Q9UNK0 236 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 LUC7L2Q9Y383 392 aaKnown RBP5.6□□□□□ -1.51
SDC2-204ENST00000519914 ADAMTSL1Q8N6G6 1762 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 MYH10P35580 1976 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 ATP8B3O60423 1300 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 KDM3AQ9Y4C1 1321 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 SCN9AQ15858 1988 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 A0A0U1RQJ8 604 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 FRMD3A2A2Y4 597 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 TARSL2A2RTX5 802 aaKnown RBP5.59□□□□□ -1.51
SDC2-204ENST00000519914 TRIM49BA6NDI0 452 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 MYMKA6NI61 221 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 PJA2O43164 708 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 PRLRP16471 622 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 CDC25AP30304 524 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 SHMT1P34896 483 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 SOX18P35713 384 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 HERVK_113P62684 666 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 ASIC1P78348 528 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 HYAL2Q12891 473 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 STK4Q13043 487 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 CALCRLQ16602 461 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 MAN2A1Q16706 1144 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 TMEM132AQ24JP5 1023 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 LETM2Q2VYF4 491 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 ZCWPW2Q504Y3 356 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 ZNF569Q5MCW4 686 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 BEND6Q5SZJ8 279 aaPredicted RBP5.59□□□□□ -1.51
SDC2-204ENST00000519914 ANKRD40Q6AI12 368 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 LRRC55Q6ZSA7 311 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 MAP4K3Q8IVH8 894 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 DHX37Q8IY37 1157 aaKnown RBP5.59□□□□□ -1.51
SDC2-204ENST00000519914 CSGALNACT2Q8N6G5 542 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 DCAF4Q8WV16 495 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 ATRIPQ8WXE1 791 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 CRYGNQ8WXF5 182 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 LARP4BQ92615 738 aaKnown RBP5.59□□□□□ -1.51
SDC2-204ENST00000519914 SYN2Q92777 582 aaPredicted RBP5.59□□□□□ -1.51
SDC2-204ENST00000519914 DNAJC19Q96DA6 116 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 NUP88Q99567 741 aaPredicted RBP5.59□□□□□ -1.51
SDC2-204ENST00000519914 CHP1Q99653 195 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 IDI2Q9BXS1 227 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 FUT8Q9BYC5 575 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 TSGA10Q9BZW7 698 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 GBP3Q9H0R5 595 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 RASSF4Q9H2L5 321 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 JMJD4Q9H9V9 463 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 ARFGAP3Q9NP61 516 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 KCNMB3Q9NPA1 279 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 ZNHIT6Q9NWK9 470 aaKnown RBP5.59□□□□□ -1.51
SDC2-204ENST00000519914 KCNK4Q9NYG8 393 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 PSD3Q9NYI0 1048 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 SAP30BPQ9UHR5 308 aaKnown RBP5.59□□□□□ -1.51
SDC2-204ENST00000519914 TRPC5Q9UL62 973 aaPredicted RBP5.59□□□□□ -1.51
SDC2-204ENST00000519914 PLAGL2Q9UPG8 496 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 JAG2Q9Y219 1238 aa5.59□□□□□ -1.51
SDC2-204ENST00000519914 SIK3Q9Y2K2 1263 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms