RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 Q7L0L9 218 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 TMCO2Q7Z6W1 182 aaPredicted RBP8.43□□□□□ -1.06
SDCBP-206ENST00000519115 C4orf19Q8IY42 314 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 CEP57L1Q8IYX8 460 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 LINC01465Q8N7H1 131 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 CNNM3Q8NE01 707 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 NEK9Q8TD19 979 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 SYMPKQ92797 1274 aaKnown RBP8.43□□□□□ -1.06
SDCBP-206ENST00000519115 CALML4Q96GE6 196 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 CEP170P1Q96L14 293 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 SCLT1Q96NL6 688 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 CLIC6Q96NY7 704 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 CEP89Q96ST8 783 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 MAP7D2Q96T17 732 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 BPIFA3Q9BQP9 254 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 POLR3CQ9BUI4 534 aaPredicted RBP8.43□□□□□ -1.06
SDCBP-206ENST00000519115 NIFKQ9BYG3 293 aaKnown RBP8.43□□□□□ -1.06
SDCBP-206ENST00000519115 IFIH1Q9BYX4 1025 aaKnown RBP8.43□□□□□ -1.06
SDCBP-206ENST00000519115 CELF4Q9BZC1 486 aaKnown RBP8.43□□□□□ -1.06
SDCBP-206ENST00000519115 GOLPH3LQ9H4A5 285 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 ZSWIM4Q9H7M6 989 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 AGO3Q9H9G7 860 aaKnown RBP8.43□□□□□ -1.06
SDCBP-206ENST00000519115 CDHR5Q9HBB8 845 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 CYP26B1Q9NR63 512 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 KBTBD4Q9NVX7 518 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 ANO10Q9NW15 660 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 LRWD1Q9UFC0 647 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 KDM3AQ9Y4C1 1321 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.42□□□□□ -1.06
SDCBP-206ENST00000519115 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.42□□□□□ -1.06
SDCBP-206ENST00000519115 PP2D1A8MPX8 630 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 ACTN4O43707 911 aaKnown RBP8.42□□□□□ -1.06
SDCBP-206ENST00000519115 DKC1O60832 514 aaKnown RBP eCLIP8.42□□□□□ -1.06
SDCBP-206ENST00000519115 MED24O75448 989 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 BAIAP3O94812 1187 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 SLITRK3O94933 977 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 RPLP2P05387 115 aaKnown RBP8.42□□□□□ -1.06
SDCBP-206ENST00000519115 SPATA31C1P0DKV0 1188 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 MYOGP15173 224 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 DNAJB2P25686 324 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 RPA1P27694 616 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 CD52P31358 61 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 CCT6AP40227 531 aaKnown RBP8.42□□□□□ -1.06
SDCBP-206ENST00000519115 NLRP11P59045 1033 aaKnown RBP8.42□□□□□ -1.06
SDCBP-206ENST00000519115 SMAD3P84022 425 aaKnown RBP8.42□□□□□ -1.06
SDCBP-206ENST00000519115 IKBKEQ14164 716 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 EMC2Q15006 297 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 ZRSR1Q15695 479 aaKnown RBP8.42□□□□□ -1.06
SDCBP-206ENST00000519115 LONRF3Q496Y0 759 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 RRAGBQ5VZM2 374 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 HAUS3Q68CZ6 603 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 FAM117BQ6P1L5 589 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 FOXR2Q6PJQ5 311 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 POTEGQ6S5H5 508 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.42□□□□□ -1.06
SDCBP-206ENST00000519115 TSHZ1Q6ZSZ6 1077 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 PIGOQ8TEQ8 1089 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 TMEM40Q8WWA1 233 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 SEPT8Q92599 483 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 EPSTI1Q96J88 318 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 CCDC43Q96MW1 224 aaKnown RBP8.42□□□□□ -1.06
SDCBP-206ENST00000519115 FAM161BQ96MY7 647 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 OSMRQ99650 979 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 HSD17B14Q9BPX1 270 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 PBX4Q9BYU1 374 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 TSPY26PQ9H489 355 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 RMND1Q9NWS8 449 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 KCND2Q9NZV8 630 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 YBX2Q9Y2T7 364 aaKnown RBP8.42□□□□□ -1.06
SDCBP-206ENST00000519115 KIAA1671Q9BY89 1806 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 SZT2Q5T011 3432 aa8.42□□□□□ -1.06
SDCBP-206ENST00000519115 COL4A4P53420 1690 aaPredicted RBP8.41□□□□□ -1.06
SDCBP-206ENST00000519115 ABHD14A-ACY1A0A1B0GW23 586 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 PVALEFA0A1B0GWK0 134 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 USO1O60763 962 aaKnown RBP8.41□□□□□ -1.06
SDCBP-206ENST00000519115 GPR32O75388 356 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 MAFO75444 373 aaPredicted RBP8.41□□□□□ -1.06
SDCBP-206ENST00000519115 LYPLA2O95372 231 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 IBSPP21815 317 aaPredicted RBP8.41□□□□□ -1.06
SDCBP-206ENST00000519115 TMOD1P28289 359 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 CDC25AP30304 524 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 POLGP54098 1239 aaPredicted RBP8.41□□□□□ -1.06
SDCBP-206ENST00000519115 PAK2Q13177 524 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 KCNB1Q14721 858 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 POSTNQ15063 836 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 COBLL1Q53SF7 1204 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 OTUD6AQ7L8S5 288 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 CABP7Q86V35 215 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 CATSPER3Q86XQ3 398 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 HERC6Q8IVU3 1022 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 MYOCDQ8IZQ8 938 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 NME8Q8N427 588 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 DEFB123Q8N688 67 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 MLKLQ8NB16 471 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 SNX29Q8TEQ0 813 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 LINC01599Q8WXQ3 324 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 SLC7A3Q8WY07 619 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 TMEM143Q96AN5 459 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 KIF12Q96FN5 646 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 DCBLD2Q96PD2 775 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms