RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	PRPF31	Q8WWY3	499 aa	Known RBP	26.95	■■□□□ 1.9
CNOT7-204	ENST00000518885	P2RX5	Q93086	422 aa		26.95	■■□□□ 1.9
CNOT7-204	ENST00000518885	POLR3C	Q9BUI4	534 aa	Predicted RBP	26.95	■■□□□ 1.9
CNOT7-204	ENST00000518885	MRPL42	Q9Y6G3	142 aa	Known RBP	26.95	■■□□□ 1.9
CNOT7-204	ENST00000518885	EOMES	O95936	686 aa		26.94	■■□□□ 1.9
CNOT7-204	ENST00000518885	MUT	P22033	750 aa		26.94	■■□□□ 1.9
CNOT7-204	ENST00000518885	PCBP1	Q15365	356 aa	Known RBP eCLIP	26.94	■■□□□ 1.9
CNOT7-204	ENST00000518885	CSPP1	Q1MSJ5	1256 aa		26.94	■■□□□ 1.9
CNOT7-204	ENST00000518885	RILPL1	Q5EBL4	403 aa		26.94	■■□□□ 1.9
CNOT7-204	ENST00000518885	CATSPER4	Q7RTX7	472 aa		26.94	■■□□□ 1.9
CNOT7-204	ENST00000518885	SRGAP1	Q7Z6B7	1085 aa		26.94	■■□□□ 1.9
CNOT7-204	ENST00000518885	HLA-C	Q95604	372 aa		26.94	■■□□□ 1.9
CNOT7-204	ENST00000518885	TMEM143	Q96AN5	459 aa		26.94	■■□□□ 1.9
CNOT7-204	ENST00000518885	NACC1	Q96RE7	527 aa		26.94	■■□□□ 1.9
CNOT7-204	ENST00000518885	PCDHB12	Q9Y5F1	795 aa		26.94	■■□□□ 1.9
CNOT7-204	ENST00000518885	TBKBP1	A7MCY6	615 aa		26.93	■■□□□ 1.9
CNOT7-204	ENST00000518885	PHKA2	P46019	1235 aa		26.93	■■□□□ 1.9
CNOT7-204	ENST00000518885	NCBP1	Q09161	790 aa	Known RBP	26.93	■■□□□ 1.9
CNOT7-204	ENST00000518885	LAMTOR4	Q0VGL1	99 aa		26.93	■■□□□ 1.9
CNOT7-204	ENST00000518885	ZNF579	Q8NAF0	562 aa	Known RBP	26.93	■■□□□ 1.9
CNOT7-204	ENST00000518885	ASB2	Q96Q27	587 aa		26.93	■■□□□ 1.9
CNOT7-204	ENST00000518885	NLRC5	Q86WI3	1866 aa		26.92	■■□□□ 1.9
CNOT7-204	ENST00000518885		A0A0U1RQF3	1178 aa		26.92	■■□□□ 1.9
CNOT7-204	ENST00000518885	CD2BP2	O95400	341 aa	Known RBP	26.92	■■□□□ 1.9
CNOT7-204	ENST00000518885	SRGAP2C	P0DJJ0	459 aa		26.92	■■□□□ 1.9
CNOT7-204	ENST00000518885	FXR2	P51116	673 aa	Known RBP eCLIP	26.92	■■□□□ 1.9
CNOT7-204	ENST00000518885	RAB27A	P51159	221 aa		26.92	■■□□□ 1.9
CNOT7-204	ENST00000518885	TWF2	Q6IBS0	349 aa	Known RBP	26.92	■■□□□ 1.9
CNOT7-204	ENST00000518885	ECHDC2	Q86YB7	292 aa		26.92	■■□□□ 1.9
CNOT7-204	ENST00000518885	TRAIP	Q9BWF2	469 aa		26.92	■■□□□ 1.9
CNOT7-204	ENST00000518885	BACH2	Q9BYV9	841 aa		26.92	■■□□□ 1.9
CNOT7-204	ENST00000518885	TMEM117	Q9H0C3	514 aa		26.92	■■□□□ 1.9
CNOT7-204	ENST00000518885	PRDM6	Q9NQX0	595 aa		26.92	■■□□□ 1.9
CNOT7-204	ENST00000518885	DBR1	Q9UK59	544 aa	Known RBP	26.92	■■□□□ 1.9
CNOT7-204	ENST00000518885	PIN4	Q9Y237	131 aa	Known RBP	26.92	■■□□□ 1.9
CNOT7-204	ENST00000518885	FGFR4	P22455	802 aa		26.91	■■□□□ 1.9
CNOT7-204	ENST00000518885	RPA1	P27694	616 aa		26.91	■■□□□ 1.9
CNOT7-204	ENST00000518885	RARRES1	P49788	294 aa		26.91	■■□□□ 1.9
CNOT7-204	ENST00000518885	PDIA5	Q14554	519 aa		26.91	■■□□□ 1.9
CNOT7-204	ENST00000518885	FERMT3	Q86UX7	667 aa		26.91	■■□□□ 1.9
CNOT7-204	ENST00000518885	CATSPER3	Q86XQ3	398 aa		26.91	■■□□□ 1.9
CNOT7-204	ENST00000518885	KSR1	Q8IVT5	923 aa		26.91	■■□□□ 1.9
CNOT7-204	ENST00000518885	PPP2R3C	Q969Q6	453 aa		26.91	■■□□□ 1.9
CNOT7-204	ENST00000518885	BMP2K	Q9NSY1	1161 aa	Predicted RBP	26.91	■■□□□ 1.9
CNOT7-204	ENST00000518885	LRWD1	Q9UFC0	647 aa		26.91	■■□□□ 1.9
CNOT7-204	ENST00000518885	NCK2	O43639	380 aa		26.9	■■□□□ 1.9
CNOT7-204	ENST00000518885	POU5F1B	Q06416	359 aa		26.9	■■□□□ 1.9
CNOT7-204	ENST00000518885	RNF149	Q8NC42	400 aa		26.9	■■□□□ 1.9
CNOT7-204	ENST00000518885	RNF169	Q8NCN4	708 aa		26.9	■■□□□ 1.9
CNOT7-204	ENST00000518885	MCPH1	Q8NEM0	835 aa		26.9	■■□□□ 1.9
CNOT7-204	ENST00000518885	NSUN3	Q9H649	340 aa	Known RBP	26.9	■■□□□ 1.9
CNOT7-204	ENST00000518885	IFT122	Q9HBG6	1241 aa		26.9	■■□□□ 1.9
CNOT7-204	ENST00000518885	PRRC2B	Q5JSZ5	2229 aa	Known RBP	26.9	■■□□□ 1.9
CNOT7-204	ENST00000518885	CARNS1	A5YM72	827 aa		26.89	■■□□□ 1.9
CNOT7-204	ENST00000518885	ZBTB39	O15060	712 aa		26.89	■■□□□ 1.9
CNOT7-204	ENST00000518885	CSDE1	O75534	798 aa	Known RBP	26.89	■■□□□ 1.9
CNOT7-204	ENST00000518885	ERLIN2	O94905	339 aa		26.89	■■□□□ 1.9
CNOT7-204	ENST00000518885	LINC00271	P0C7V0	271 aa		26.89	■■□□□ 1.9
CNOT7-204	ENST00000518885	LAG3	P18627	525 aa		26.89	■■□□□ 1.9
CNOT7-204	ENST00000518885	PRPH	P41219	470 aa		26.89	■■□□□ 1.9
CNOT7-204	ENST00000518885	PTGDR	Q13258	359 aa		26.89	■■□□□ 1.9
CNOT7-204	ENST00000518885	FAM102B	Q5T8I3	360 aa		26.89	■■□□□ 1.9
CNOT7-204	ENST00000518885	LARP1B	Q659C4	914 aa	Known RBP	26.89	■■□□□ 1.9
CNOT7-204	ENST00000518885	LRRC43	Q8N309	656 aa		26.89	■■□□□ 1.9
CNOT7-204	ENST00000518885	PIGO	Q8TEQ8	1089 aa		26.89	■■□□□ 1.9
CNOT7-204	ENST00000518885	MRPL9	Q9BYD2	267 aa	Known RBP	26.89	■■□□□ 1.9
CNOT7-204	ENST00000518885	SPATA31C1	P0DKV0	1188 aa		26.88	■■□□□ 1.89
CNOT7-204	ENST00000518885	FGFR1	P11362	822 aa		26.88	■■□□□ 1.89
CNOT7-204	ENST00000518885	PDC	P20941	246 aa		26.88	■■□□□ 1.89
CNOT7-204	ENST00000518885	GATM	P50440	423 aa		26.88	■■□□□ 1.89
CNOT7-204	ENST00000518885	PGBD4	Q96DM1	585 aa		26.88	■■□□□ 1.89
CNOT7-204	ENST00000518885	AGPAT5	Q9NUQ2	364 aa		26.88	■■□□□ 1.89
CNOT7-204	ENST00000518885	CCT6A	P40227	531 aa	Known RBP	26.87	■■□□□ 1.89
CNOT7-204	ENST00000518885	UBE3A	Q05086	875 aa		26.87	■■□□□ 1.89
CNOT7-204	ENST00000518885	DTHD1	Q6ZMT9	781 aa		26.87	■■□□□ 1.89
CNOT7-204	ENST00000518885	COL25A1	Q9BXS0	654 aa	Predicted RBP	26.87	■■□□□ 1.89
CNOT7-204	ENST00000518885	PLAGL2	Q9UPG8	496 aa		26.87	■■□□□ 1.89
CNOT7-204	ENST00000518885	PCDHB6	Q9Y5E3	794 aa		26.87	■■□□□ 1.89
CNOT7-204	ENST00000518885	ARID2	Q68CP9	1835 aa		26.87	■■□□□ 1.89
CNOT7-204	ENST00000518885	ARHGEF35	A5YM69	484 aa		26.86	■■□□□ 1.89
CNOT7-204	ENST00000518885	GRM6	O15303	877 aa		26.86	■■□□□ 1.89
CNOT7-204	ENST00000518885	USO1	O60763	962 aa	Known RBP	26.86	■■□□□ 1.89
CNOT7-204	ENST00000518885	MED24	O75448	989 aa		26.86	■■□□□ 1.89
CNOT7-204	ENST00000518885	AXL	P30530	894 aa		26.86	■■□□□ 1.89
CNOT7-204	ENST00000518885	TOB1	P50616	345 aa	Predicted RBP	26.86	■■□□□ 1.89
CNOT7-204	ENST00000518885	NBR1	Q14596	966 aa		26.86	■■□□□ 1.89
CNOT7-204	ENST00000518885	KRT79	Q5XKE5	535 aa		26.86	■■□□□ 1.89
CNOT7-204	ENST00000518885	C4orf32	Q8N8J7	132 aa		26.86	■■□□□ 1.89
CNOT7-204	ENST00000518885	KLHL23	Q8NBE8	558 aa		26.86	■■□□□ 1.89
CNOT7-204	ENST00000518885	NFKBIZ	Q9BYH8	718 aa		26.86	■■□□□ 1.89
CNOT7-204	ENST00000518885	XPNPEP1	Q9NQW7	623 aa		26.86	■■□□□ 1.89
CNOT7-204	ENST00000518885	TYW1	Q9NV66	732 aa	Known RBP	26.86	■■□□□ 1.89
CNOT7-204	ENST00000518885	PPM1A	P35813	382 aa		26.85	■■□□□ 1.89
CNOT7-204	ENST00000518885	POTEG	Q6S5H5	508 aa		26.85	■■□□□ 1.89
CNOT7-204	ENST00000518885	THNSL1	Q8IYQ7	743 aa		26.85	■■□□□ 1.89
CNOT7-204	ENST00000518885	IGSF22	Q8N9C0	903 aa		26.85	■■□□□ 1.89
CNOT7-204	ENST00000518885	CNNM3	Q8NE01	707 aa		26.85	■■□□□ 1.89
CNOT7-204	ENST00000518885	CCDC51	Q96ER9	411 aa		26.85	■■□□□ 1.89
CNOT7-204	ENST00000518885	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	26.85	■■□□□ 1.89
CNOT7-204	ENST00000518885	FAM105A	Q9NUU6	356 aa		26.85	■■□□□ 1.89

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms