RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 E2F7Q96AV8 911 aa4.3□□□□□ -1.72
PCM1-208ENST00000518877 BBC3Q96PG8 261 aaPredicted RBP4.3□□□□□ -1.72
PCM1-208ENST00000518877 FOXB1Q99853 325 aa4.3□□□□□ -1.72
PCM1-208ENST00000518877 MRPS23Q9Y3D9 190 aaKnown RBP4.3□□□□□ -1.72
PCM1-208ENST00000518877 GRID2IPA4D2P6 1211 aa4.29□□□□□ -1.72
PCM1-208ENST00000518877 RECQL4O94761 1208 aa4.29□□□□□ -1.72
PCM1-208ENST00000518877 SCAF4O95104 1147 aaKnown RBP4.29□□□□□ -1.72
PCM1-208ENST00000518877 VSIG10L2P0DP72 767 aa4.29□□□□□ -1.72
PCM1-208ENST00000518877 KCNA6P17658 529 aa4.29□□□□□ -1.72
PCM1-208ENST00000518877 HK1P19367 917 aa4.29□□□□□ -1.72
PCM1-208ENST00000518877 RGS3P49796 1198 aa4.29□□□□□ -1.72
PCM1-208ENST00000518877 ANTXR2P58335 489 aa4.29□□□□□ -1.72
PCM1-208ENST00000518877 SLC6A3Q01959 620 aa4.29□□□□□ -1.72
PCM1-208ENST00000518877 ROM1Q03395 351 aa4.29□□□□□ -1.72
PCM1-208ENST00000518877 OLFML1Q6UWY5 402 aa4.29□□□□□ -1.72
PCM1-208ENST00000518877 HTR3DQ70Z44 454 aa4.29□□□□□ -1.72
PCM1-208ENST00000518877 OVCH1Q7RTY7 1134 aa4.29□□□□□ -1.72
PCM1-208ENST00000518877 GSTCDQ8NEC7 633 aa4.29□□□□□ -1.72
PCM1-208ENST00000518877 MDGA1Q8NFP4 955 aa4.29□□□□□ -1.72
PCM1-208ENST00000518877 SLC7A14Q8TBB6 771 aa4.29□□□□□ -1.72
PCM1-208ENST00000518877 NTN5Q8WTR8 489 aaPredicted RBP4.29□□□□□ -1.72
PCM1-208ENST00000518877 TOR3AQ9H497 397 aa4.29□□□□□ -1.72
PCM1-208ENST00000518877 SLC52A2Q9HAB3 445 aa4.29□□□□□ -1.72
PCM1-208ENST00000518877 NDOR1Q9UHB4 597 aa4.29□□□□□ -1.72
PCM1-208ENST00000518877 SFMBT1Q9UHJ3 866 aa4.29□□□□□ -1.72
PCM1-208ENST00000518877 POLR2AP24928 1970 aaKnown RBP4.29□□□□□ -1.72
PCM1-208ENST00000518877 KDM2BQ8NHM5 1336 aa4.28□□□□□ -1.72
PCM1-208ENST00000518877 CCDC85CA6NKD9 419 aa4.28□□□□□ -1.72
PCM1-208ENST00000518877 KIAA0355O15063 1070 aa4.28□□□□□ -1.72
PCM1-208ENST00000518877 DAPK3O43293 454 aa4.28□□□□□ -1.72
PCM1-208ENST00000518877 KRT37O76014 449 aa4.28□□□□□ -1.72
PCM1-208ENST00000518877 RASGRP1O95267 797 aa4.28□□□□□ -1.72
PCM1-208ENST00000518877 JUNP05412 331 aaKnown RBP4.28□□□□□ -1.72
PCM1-208ENST00000518877 NPEPPSP55786 919 aa4.28□□□□□ -1.72
PCM1-208ENST00000518877 IRF9Q00978 393 aa4.28□□□□□ -1.72
PCM1-208ENST00000518877 PLEKHG4Q58EX7 1191 aa4.28□□□□□ -1.72
PCM1-208ENST00000518877 NBPF6Q5VWK0 638 aa4.28□□□□□ -1.72
PCM1-208ENST00000518877 C1QL3Q5VWW1 255 aa4.28□□□□□ -1.72
PCM1-208ENST00000518877 RTN4RL1Q86UN2 441 aaPredicted RBP4.28□□□□□ -1.72
PCM1-208ENST00000518877 GLCCI1Q86VQ1 547 aa4.28□□□□□ -1.72
PCM1-208ENST00000518877 C2orf69Q8N8R5 385 aa4.28□□□□□ -1.72
PCM1-208ENST00000518877 BEND2Q8NDZ0 799 aa4.28□□□□□ -1.72
PCM1-208ENST00000518877 ST8SIA2Q92186 375 aa4.28□□□□□ -1.72
PCM1-208ENST00000518877 FOXRED1Q96CU9 486 aaPredicted RBP4.28□□□□□ -1.72
PCM1-208ENST00000518877 SCLYQ96I15 445 aa4.28□□□□□ -1.72
PCM1-208ENST00000518877 NBPF4Q96M43 638 aa4.28□□□□□ -1.72
PCM1-208ENST00000518877 WDR92Q96MX6 357 aa4.28□□□□□ -1.72
PCM1-208ENST00000518877 CELF4Q9BZC1 486 aaKnown RBP4.28□□□□□ -1.72
PCM1-208ENST00000518877 SIRPGQ9P1W8 387 aa4.28□□□□□ -1.72
PCM1-208ENST00000518877 DNAI1Q9UI46 699 aa4.28□□□□□ -1.72
PCM1-208ENST00000518877 COL4A3Q01955 1670 aa4.27□□□□□ -1.73
PCM1-208ENST00000518877 PRLP01236 227 aa4.27□□□□□ -1.73
PCM1-208ENST00000518877 CDK4P11802 303 aa4.27□□□□□ -1.73
PCM1-208ENST00000518877 LAG3P18627 525 aa4.27□□□□□ -1.73
PCM1-208ENST00000518877 SPIDRQ14159 915 aa4.27□□□□□ -1.73
PCM1-208ENST00000518877 CLEC14AQ86T13 490 aa4.27□□□□□ -1.73
PCM1-208ENST00000518877 CMTM4Q8IZR5 234 aa4.27□□□□□ -1.73
PCM1-208ENST00000518877 SUPT20HQ8NEM7 779 aa4.27□□□□□ -1.73
PCM1-208ENST00000518877 NKD2Q969F2 451 aaPredicted RBP4.27□□□□□ -1.73
PCM1-208ENST00000518877 DYDC2Q96IM9 177 aa4.27□□□□□ -1.73
PCM1-208ENST00000518877 EPC1Q9H2F5 836 aa4.27□□□□□ -1.73
PCM1-208ENST00000518877 C14orf93Q9H972 538 aaKnown RBP4.27□□□□□ -1.73
PCM1-208ENST00000518877 POLR3BQ9NW08 1133 aaPredicted RBP4.27□□□□□ -1.73
PCM1-208ENST00000518877 CCDC9Q9Y3X0 531 aaKnown RBP4.27□□□□□ -1.73
PCM1-208ENST00000518877 HS3ST4Q9Y661 456 aa4.27□□□□□ -1.73
PCM1-208ENST00000518877 A0A0A6YYK5 440 aaPredicted RBP4.26□□□□□ -1.73
PCM1-208ENST00000518877 FAM221BA6H8Z2 402 aa4.26□□□□□ -1.73
PCM1-208ENST00000518877 GRXCR1A8MXD5 290 aa4.26□□□□□ -1.73
PCM1-208ENST00000518877 EFCAB14O75071 495 aa4.26□□□□□ -1.73
PCM1-208ENST00000518877 ZBTB48P10074 688 aaPredicted RBP4.26□□□□□ -1.73
PCM1-208ENST00000518877 GYPEP15421 78 aa4.26□□□□□ -1.73
PCM1-208ENST00000518877 USP14P54578 494 aa4.26□□□□□ -1.73
PCM1-208ENST00000518877 SERINC3Q13530 473 aa4.26□□□□□ -1.73
PCM1-208ENST00000518877 NAALADL2Q58DX5 795 aa4.26□□□□□ -1.73
PCM1-208ENST00000518877 TRIM61Q5EBN2 209 aa4.26□□□□□ -1.73
PCM1-208ENST00000518877 DCAF17Q5H9S7 520 aaPredicted RBP4.26□□□□□ -1.73
PCM1-208ENST00000518877 ZC3H12BQ5HYM0 836 aaKnown RBP4.26□□□□□ -1.73
PCM1-208ENST00000518877 NAIF1Q69YI7 327 aaPredicted RBP4.26□□□□□ -1.73
PCM1-208ENST00000518877 SLFN12LQ6IEE8 588 aa4.26□□□□□ -1.73
PCM1-208ENST00000518877 CC2D1AQ6P1N0 951 aaPredicted RBP4.26□□□□□ -1.73
PCM1-208ENST00000518877 ABHD17CQ6PCB6 329 aa4.26□□□□□ -1.73
PCM1-208ENST00000518877 RD3Q7Z3Z2 195 aa4.26□□□□□ -1.73
PCM1-208ENST00000518877 CXorf67Q86X51 503 aaPredicted RBP4.26□□□□□ -1.73
PCM1-208ENST00000518877 MAGEB10Q96LZ2 347 aaPredicted RBP4.26□□□□□ -1.73
PCM1-208ENST00000518877 KCMF1Q9P0J7 381 aa4.26□□□□□ -1.73
PCM1-208ENST00000518877 EIF2B4Q9UI10 523 aaKnown RBP4.26□□□□□ -1.73
PCM1-208ENST00000518877 TCRBV16S1A1N1A0A5B0 115 aa4.25□□□□□ -1.73
PCM1-208ENST00000518877 UBA6A0AVT1 1052 aaPredicted RBP4.25□□□□□ -1.73
PCM1-208ENST00000518877 TRIM24O15164 1050 aa4.25□□□□□ -1.73
PCM1-208ENST00000518877 KCNQ2O43526 872 aa4.25□□□□□ -1.73
PCM1-208ENST00000518877 STC2O76061 302 aa4.25□□□□□ -1.73
PCM1-208ENST00000518877 ERBB2P04626 1255 aa4.25□□□□□ -1.73
PCM1-208ENST00000518877 FNTBP49356 437 aa4.25□□□□□ -1.73
PCM1-208ENST00000518877 RBM25P49756 843 aaKnown RBP4.25□□□□□ -1.73
PCM1-208ENST00000518877 RASA3Q14644 834 aa4.25□□□□□ -1.73
PCM1-208ENST00000518877 PRAMEF9Q5VWM5 478 aa4.25□□□□□ -1.73
PCM1-208ENST00000518877 LRP10Q7Z4F1 713 aa4.25□□□□□ -1.73
PCM1-208ENST00000518877 APBB1IPQ7Z5R6 666 aaPredicted RBP4.25□□□□□ -1.73
PCM1-208ENST00000518877 LCORLQ8N3X6 602 aa4.25□□□□□ -1.73
PCM1-208ENST00000518877 JMYQ8N9B5 988 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms